Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1095 ATGGCCGCCACCGCCAGCTCCACCACTCTCCTCCGGCCTACCCCCTTTCTCGGCCAGACCAGATCGGGCTCCTCCCTCAGAGATGTCGTCGCCATGGGAACTGGAAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACAGAGTCAAGTACTTGGGCCCATTTTCAGCTCAGACTCCATCCTACTTGAACGGAGAGTTTCCCGGCGATTATGGATGGGACACTGCCGGCTTGTCGGCTGATCCTGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTGATCCACGGAAGGTGGGCAATGTTGGGAGCGTTCGGGTGCATAACGCCGGAAGTGCTAGAAAAATGGTTGAACGTGGACTTCAAGGAGCCGGTGTGGTTCAAGGCGGGATCCCAGATCTTCTCAGAAGGCGGGCTGGACTACCTGGGGAACCCCAACCTGGTCCACGCACAGAGCATATTGGCCGTACTCGGCTTCCAAGTGGTCCTAATGGGCCTGGTAGAAGGGTTCCGCATCAACGGCCTGGACGGCGTGGGCGAGGGCAATGACCTCTACCCGGGCGGACAGTACTTCGACCCTCTCGGTCTCGCCGATGACCCGGTCACCTTCGCCGAGCTCAAGGTCAAGGAGATCAAGAACGGCCGGCTCGCCATGTTCTCCATGTTCGGCTTCTTCGTTCAGGCCATCGTCACCGGGAAAGGCCCCCTCGAGAATCTTCTCGACCATCTCGACAACCCTGTCGCCAACAATGCTTGGGTTTATGCCACCAAGTTTGCCCCTGGCTCATAA 789 58.05 MAATASSTTLLRPTPFLGQTRSGSSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWLNVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18324693 18325811 - Hsped.07g10950.1 Hepe07g1095 574490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1095 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 261 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Hepe07g1095 262 SUPERFAMILY Chlorophyll a-b binding protein 43 259 - -
Hepe07g1095 262 FunFam Chlorophyll a-b binding protein, chloroplastic 51 255 - -
Hepe07g1095 262 Pfam Chlorophyll A-B binding protein 61 229 IPR022796 -
Hepe07g1095 262 Gene3D Chlorophyll a/b binding protein domain 51 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1350 Hepe-Chr1:78679114 Hepe07g1095 Hepe-Chr7:18324693 1.75e-184 dispersed
Hepe01g2379 Hepe-Chr1:88170816 Hepe07g1095 Hepe-Chr7:18324693 2.01e-53 dispersed
Hepe07g1095 Hepe-Chr7:18324693 Hepe07g1785 Hepe-Chr7:60430990 1.16e-120 dispersed
Hepe07g1095 Hepe-Chr7:18324693 Hepe09g0112 Hepe-Chr9:895168 1.67e-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1095 K08914 - csv:101207278 511.531