Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1096 ATGGCTGGTCAATCAGATCCTCACCTGACCCTATTTTCTGCAGACGAGGTCGAGTTTGTAGCTGAAGATGATGTGGTGGAGATTGTTCCTAATATGAGAATGGATTCCCTGCATTTGATCTGTGGAGATTATGGTCCGTTTTATCCCCAAATAGCAACTGAAGTTCCATTGTGGCTAGCAATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGCCTCCAGAGTGGATGTCAGTGGAAAAGTTGACACAAATTTTGGAGGCAGAACGAGAGTCTGAAGGATCTTTCCAGATACTACCCTTCCATTACGTGGAAATATCAAAACTTCTTTTTGACCATGCACGAGACGACGTTCCTGACATGTATTTGGTGAGGTCTCTTATTGAAGATATCAGGGATGTTAGGTTTCACAAAGTTGAAACCAGCTTGGAGTCGATTGATACACGCACATCTGCAGTGAAGATTAAAGATCTATCTGCCATGGAAGTGAATATAGTTCGACCTTTTGTCGGTAGAGCGCTGCAGGCAATTTACAAGCATGGAAATCCGGAGTTCGTCCCAGATCAAGAAAGGATGACCAATGTGCAGCCACAAGGACACGATCACGGACAAAGACGACCTCTTCGGAGACGCCATCGACACCGGTCGAGCGGCTCGTCATCTCCTACAAACCGCTCCCTCGACGACATTGCCTAA 696 45.69 MAGQSDPHLTLFSADEVEFVAEDDVVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRPPEWMSVEKLTQILEAERESEGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKHGNPEFVPDQERMTNVQPQGHDHGQRRPLRRRHRHRSSGSSSPTNRSLDDIA 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18331342 18337071 + Hsped.07g10960.1 Hepe07g1096 574491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1096 231 SUPERFAMILY GINS helical bundle-like 73 182 IPR036224 -
Hepe07g1096 231 MobiDBLite consensus disorder prediction 204 218 - -
Hepe07g1096 231 PIRSF GINS_PSF2 2 215 IPR007257 GO:0005634(InterPro)|GO:0006260(InterPro)
Hepe07g1096 231 MobiDBLite consensus disorder prediction 185 231 - -
Hepe07g1096 231 Pfam GINS complex protein helical bundle domain 71 170 IPR021151 -
Hepe07g1096 231 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 197 IPR007257 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)
Hepe07g1096 231 CDD GINS_A_psf2 66 182 - -
Hepe07g1096 231 Gene3D - 12 77 - -
Hepe07g1096 231 Gene3D - 78 191 - -
Hepe07g1096 231 FunFam DNA replication complex GINS protein PSF2 78 194 - -
Hepe07g1096 231 SUPERFAMILY PriA/YqbF domain 12 71 - -
Hepe07g1096 231 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Hepe07g1096 231 CDD GINS_B_Psf2 13 74 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0357 Hepe-Chr7:3646360 Hepe07g1096 Hepe-Chr7:18331342 3.90e-150 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1096 K10733 - csv:101212053 372.089