Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1107 ATGGGTTTAGTTTTGGTTATCCTCTTCGTCTGCTTATACATTTTCAAAAAGAGATCGACCTTCAAAGATGACCATGATAAATTAGATGCTGAAGACTTGGAGCTTCCCTTATTTGATCTATCCTTGATAAATAGTGCCACTAATAACTTCTCACTTGATAATAAGCTTGGAGAAGGTGGCTTTGGACCAGTATATAAGGGTAAGCTTACAAATGGACAAGATATTGCCGTGAAGAGACTTTCAAAGAGTTCTGGACAGGGAATGAATGAGTTCAAGAATGAAGTAATCCTTACTGCAAAGCTTCAACATCGAAATCTTGCAAAAGTTCTTGGTTGCTGCATTCAAGGAGATGAGAAAATGCTAGTTTACGAGTACATGCCGAACAAAAGTTTGGACTTCTTTATATTTGATGAAACACGACGTCAACTATTAAACTGGTCGCAACGATATCACATTATCTGTGGGATTGCAAGAGGACTCGTGTATCTTCATCAAGATTCTAGATTGAGGATTATACATAGAGATTTAAAAGCAAGTAATGTTTTACTTGATATGGATATGAATCCAAAAATCTCTGATTTTGGTCTTGCTAAAACTTGTGGAGGGGATCAGACTGAAGGAGAGACAATAAGAGTGGTTGGAACGTACGGATATATGGCCCCAGAATATGCTTTTGATGGACAATTCTCCGTAAAATCTGATACATTTAGTTATGGCATTTTGTTGTTGGAGATCATCAGTGGAAAAAGAAGCAGAGGATTTCGTCACTTGAATGATCAAAATCTCATTGGTTATGCATGGCAATTATGGAAAGGGGGAAATCCAGCAGAATTGATTGATGACACAATTCAAGAAACCTGCAATTTCTCAGAGGTATTGAGATGTATCAATATCAGTTTGTTGTGTGTTCAACAACATCCCAGCGATCGACCTACGATGTCGTCGGTAGTTATGATGTTAGGGTGTAAAATTCCTTTGTTACAACCAAAACAACCAGGTTTCTTTGCAGAAAATGAAGGGATTACAATGGATGGCTACTCAAGTAAAGATAAATCAGCTTCAACCAGTGGGTTGACATTATTTGCATTCTCGGATACTTAG 1101 37.6 MGLVLVILFVCLYIFKKRSTFKDDHDKLDAEDLELPLFDLSLINSATNNFSLDNKLGEGGFGPVYKGKLTNGQDIAVKRLSKSSGQGMNEFKNEVILTAKLQHRNLAKVLGCCIQGDEKMLVYEYMPNKSLDFFIFDETRRQLLNWSQRYHIICGIARGLVYLHQDSRLRIIHRDLKASNVLLDMDMNPKISDFGLAKTCGGDQTEGETIRVVGTYGYMAPEYAFDGQFSVKSDTFSYGILLLEIISGKRSRGFRHLNDQNLIGYAWQLWKGGNPAELIDDTIQETCNFSEVLRCINISLLCVQQHPSDRPTMSSVVMMLGCKIPLLQPKQPGFFAENEGITMDGYSSKDKSASTSGLTLFAFSDT 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18724577 18726531 + Hsped.07g11070.1 Hepe07g1107 574502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1107 366 CDD STKc_IRAK 56 320 - -
Hepe07g1107 366 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 335 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Hepe07g1107 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1107 366 ProSiteProfiles Protein kinase domain profile. 50 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1107 366 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 126 328 - -
Hepe07g1107 366 SUPERFAMILY Protein kinase-like (PK-like) 34 339 IPR011009 -
Hepe07g1107 366 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 15 125 - -
Hepe07g1107 366 Pfam Protein tyrosine and serine/threonine kinase 51 319 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1107 366 Gene3D Phosphorylase Kinase; domain 1 23 125 - -
Hepe07g1107 366 Gene3D Transferase(Phosphotransferase) domain 1 126 325 - -
Hepe07g1107 366 SMART serkin_6 50 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1107 Hepe-Chr7:18724577 Hepe07g1974 Hepe-Chr7:63703114 2.53e-130 dispersed
Hepe07g1107 Hepe-Chr7:18724577 Hepe07g1108 Hepe-Chr7:19024716 1.48e-225 tandem
Hepe01g0555 Hepe-Chr1:65469028 Hepe07g1107 Hepe-Chr7:18724577 2.90e-93 wgd
Hepe03g0876 Hepe-Chr3:30502436 Hepe07g1107 Hepe-Chr7:18724577 1.39e-11 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72941 PF07714 PK_Tyr_Ser-Thr 3.70E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1107 - - - 0.0