Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1108 ATGGACTCTTTCTCTCTTCAACACTCGTCGCTTTTAACTTTGTTTTTTTTTCTCTTCAGGTCTGTAGCTGCCATTGATTCCTTAACGGCTCAAAACCCATATCTCAGAGACGGGCTTAGTTTGGTCTCCAGAAATGGCAACTTCGAATTGGGTTTCTTCAGTCCGGGTCTTTCCGGCCACCGGTACTTGGGAATCTGGTTCAAGAATCGGCGAGGTCCGACCTCCGTTTGGGTTGCGAACAGGAAAACCCCCATTAACGATTCGTCTGGTTTATTATTGATGAACATTACAACGGCAAATCTTACACTCTATAGCCACAATTCCACCGCCATTGTTTGGTCCGCCAGGTTACTGAGAAAAGTCCCCAATGGGGTTTTGCAGCTATTGGACACTGGAAATCTTGTGTTGAGAAATGGGGAAGATGAAAATCCCCAAAATTACTCCTGGCAAAGCTTTGATTACCCATCTGACACTCTCTTGCCTGGAATGAAGCTGGGTTGGGACTTGAGACATAACATAGATAGAAGATTAGACGCTTGGAAGAATCCCAATGACCCATCTCCTGGAAACCTCAGTTGGAGGATGGAGCTTAATGAATATCCTGAGTCTGTTATGTGGAAAGGTTCCCAAGAATACTTCAGGCATGGCCCATGGAATGGTTTGAGAGTCACTAGTAGACCATTAGGCATAGCGCCAATTCTGAACTTCAACTTTGTTTCAAATGAGGATGAGGTTTACTACCAATACTCTGTTGTAAATAAGTCTCACACAGTGATGGTGGTGATGAACCAATCCAATTACATGCGCATAATGTACTTGTGGTCTCCAGCTGAGAGACAGTGGAGACTTTACACTTCATTGCCAAGGGATTTCTGTGACAATTATGCCCTGTGTGGCCCCTATGGATATTGTGATATAAGGGTCACTCCATCTTGTAAATGTCTAGAAGGGTTTAAGCCAAGATCGCCTGATGGTTGGAAGGCAGGGGAATTTGCGGACGGTTGTGAACGGAACAAATTGATGAATTGTGGTGATGGAGTTGGGTTTGCACAGCTCAACCAGTTGAAATTGCCAGACACAAAGCATACTTGGGTCAATAAAAGCATGAATCTTGAAGAATGCAAGCAAAAATGCTTGAGAAATTGTTCTTGTATGGCTTATGCAAATACAAATATCAGTGGCGGTGGCAGTGGCTGTGTTTTATGGATTGGTGATCTAATTGACTTGAAATTGATCCCGGACGCAGGACAGGATTTATATGTCAGGATGCTAGCATCAGAATTAGTCAAGCATAAAGAGGCACACAAAACTGAAAGATTGAATCCTAAGGTGAAGATTGCTTTGGTTGCGATTGCGGCTGGTTTAGCTTTGGCTATCCTCTTCATATGCTTATACATTTTCAGAAAGAGATCAACCTCCAAAGATGACCATGAGAAAATAGAAGCTGAAGACTTGGAGCTTCCCTTGTTTGATCTATCCTTCATAAATAGTGCCACAAATAACTTCTCACACAATAATAAGCTAGGAGAAGGCGGCTTTGGGCCAGTATATAAGGGTAAGCTTACAAATGGACAAGATATTGCAGTGAAAAGACTTTCACAGAGTTCTGGACAGGGAATGAATGAGTTTAAGAATGAAGTAATCCTAATTGCAAAACTTCAACATCGAAATCTTGTTAAGCTTCTTGGTTGTTGCATTCAAGGAGACGAGAAAATGCTAGTCTACGAGTATATGCCAAACAAAAGTTTGGACTTCTTTATATTTGATCGAAGACAACGTCAATTATTAGACTGGTCGACACGGTATCGTATTATTGGTGGAATTGCTAGAGGACTCGTGTATCTTCATCAAGATTCTAGATTAAGGATTATACATAGAGATTTAAAAGCAAGTAATGTTTTACTTGATACGGATATGAATCCAAAAATCTCTGATTTTGGTCTTGCTAAAACTTGCGGTGGGGATCAAACCGAAGGACGGACGATAAGAGTGGTCGGAACTTACGGATATATGGCACCAGAATATGCTTTTGATGGACAATTCTCAGTAAAATCTGATGCATTTAGTTATGGCATTTTGTTGTTGGAGATCGTTAGTGGAAAAAGAAGCAGAGGTTTCTGCCATTTGAATGACCAAAATCTGATTGCATATGCATGGCAATTGTGGAAAGAAGGAAATCCAGAAGAATTGATCGATGATGCCATTCGAGAAACGTGCATCCTTTCGGAAGTATTGAGATGTATCAACATCAGTTTGTTGTGTGTTCAACAACATCCCAATGATCGACCCACAATGTCATCGGTGGTAATGATGTTAGGCTGTGAAATTCCTTTGTCGCAACCAAAACAACCAGGATTTTTCGTAGAAAATGAAGCGATTGCAATGAACAGTGGCTCGAGTAAAGATAAATCATCTTCAACTAATGAATTAACTATTACATTCCCAGATCCCAGGTAA 2457 41.15 MDSFSLQHSSLLTLFFFLFRSVAAIDSLTAQNPYLRDGLSLVSRNGNFELGFFSPGLSGHRYLGIWFKNRRGPTSVWVANRKTPINDSSGLLLMNITTANLTLYSHNSTAIVWSARLLRKVPNGVLQLLDTGNLVLRNGEDENPQNYSWQSFDYPSDTLLPGMKLGWDLRHNIDRRLDAWKNPNDPSPGNLSWRMELNEYPESVMWKGSQEYFRHGPWNGLRVTSRPLGIAPILNFNFVSNEDEVYYQYSVVNKSHTVMVVMNQSNYMRIMYLWSPAERQWRLYTSLPRDFCDNYALCGPYGYCDIRVTPSCKCLEGFKPRSPDGWKAGEFADGCERNKLMNCGDGVGFAQLNQLKLPDTKHTWVNKSMNLEECKQKCLRNCSCMAYANTNISGGGSGCVLWIGDLIDLKLIPDAGQDLYVRMLASELVKHKEAHKTERLNPKVKIALVAIAAGLALAILFICLYIFRKRSTSKDDHEKIEAEDLELPLFDLSFINSATNNFSHNNKLGEGGFGPVYKGKLTNGQDIAVKRLSQSSGQGMNEFKNEVILIAKLQHRNLVKLLGCCIQGDEKMLVYEYMPNKSLDFFIFDRRQRQLLDWSTRYRIIGGIARGLVYLHQDSRLRIIHRDLKASNVLLDTDMNPKISDFGLAKTCGGDQTEGRTIRVVGTYGYMAPEYAFDGQFSVKSDAFSYGILLLEIVSGKRSRGFCHLNDQNLIAYAWQLWKEGNPEELIDDAIRETCILSEVLRCINISLLCVQQHPNDRPTMSSVVMMLGCEIPLSQPKQPGFFVENEAIAMNSGSSKDKSSSTNELTITFPDPR 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19024716 19031479 + Hsped.07g11080.1 Hepe07g1108 574503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1108 818 SMART ntp_6 344 423 IPR003609 -
Hepe07g1108 818 PIRSF SRK 2 818 IPR024171 GO:0004674(InterPro)
Hepe07g1108 818 Pfam D-mannose binding lectin 74 181 IPR001480 -
Hepe07g1108 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1108 818 CDD PAN_AP_plant 341 422 - -
Hepe07g1108 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 780 - -
Hepe07g1108 818 Gene3D Transferase(Phosphotransferase) domain 1 578 779 - -
Hepe07g1108 818 Gene3D - 22 152 IPR036426 -
Hepe07g1108 818 MobiDBLite consensus disorder prediction 797 818 - -
Hepe07g1108 818 Gene3D Hepatocyte Growth Factor 341 420 - -
Hepe07g1108 818 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Hepe07g1108 818 SMART serkin_6 502 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1108 818 Pfam PAN-like domain 345 409 IPR003609 -
Hepe07g1108 818 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544(InterPro)
Hepe07g1108 818 CDD STKc_IRAK 508 772 - -
Hepe07g1108 818 Pfam Protein tyrosine and serine/threonine kinase 505 771 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1108 818 SMART blect_4 32 155 IPR001480 -
Hepe07g1108 818 Gene3D Phosphorylase Kinase; domain 1 465 577 - -
Hepe07g1108 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 186 IPR036426 -
Hepe07g1108 818 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Hepe07g1108 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Hepe07g1108 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 342 423 - -
Hepe07g1108 818 ProSiteProfiles Protein kinase domain profile. 502 786 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1108 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 786 - -
Hepe07g1108 818 CDD B_lectin 34 155 IPR001480 -
Hepe07g1108 818 SUPERFAMILY Protein kinase-like (PK-like) 487 784 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1336 Hepe-Chr1:78537690 Hepe07g1108 Hepe-Chr7:19024716 1.86e-225 dispersed
Hepe01g1338 Hepe-Chr1:78542356 Hepe07g1108 Hepe-Chr7:19024716 0.0 dispersed
Hepe07g1108 Hepe-Chr7:19024716 Hepe07g1974 Hepe-Chr7:63703114 3.37e-241 dispersed
Hepe07g1106 Hepe-Chr7:18723100 Hepe07g1108 Hepe-Chr7:19024716 1.86e-263 proximal
Hepe07g1107 Hepe-Chr7:18724577 Hepe07g1108 Hepe-Chr7:19024716 1.48e-225 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72942 PF07714 PK_Tyr_Ser-Thr 2.20E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1108 - - - 0.0