Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1110 ATGCCAACAGTTTGGTTGTCCTTGAAGAAGTCTTTGCACTGCAAATCAGAGCCATCAGAAGTTCATAACCCAAAAAGCAGAAAAAATTTAGGAGCAATTTTGACAAGAAAAACAGGAGGAGGAGGAGGAGGAAGATCAGGGTGTTCAAGGTCCATTGCAAATCTCAAAGATGTCATCCATGGTGGCAGCAAGAGGCATTTGGATAAGCCCCCAAGTTGCAGCCCAAGATCCATTGGCAGCAGTGAGTTTTTAAATCCAATAACCCACGAAGTCATTCTCAGCAACTCAAGGTGCGAGCTCAAAATCACCGGTTTTCACGGCGGTTTCAGCCAAGATGTGCCTTCCGCCGCCGACCCTCATGGCGGCTCCTCCTTTGTGGGGACTCTGACACCGGGCACACCGGGCCCCGGTGGCCACCCCACGATGCATTACTTCAATCCTACCTTGAGGTCTTCTTCGAGAAAGTTCCCTTTTAGAGAGGGATTTGGAACCTCTAATAAATCTGGCGGGGGAGCTCGCGGCGGCGTTGGCGGTGGAGCTCATTTGAGCAACAGAATCTCTTTGGAAACAGAGATTGGTGGGAATGGGTCTTCTTCTGCGGTTACTTGTCATAAATGTGGAGAGCAGTTCAACAAATGGGATGCTGCTGAAGCACATCATCTTTCTAAACATGCTGTGACTGAGCTTGTGGAAGGAGATTCATCAAGGAAAATTGTGGAGATTATATGCAGGACAAGCTGGTTAAAGTCTGAGAATCAATCTGGTAGAATAGAAAGAGTCTTGAAAGTACACAATATGCAACGAACACTAGCCCGGTTTGAGGAGTATCGCGAGACGGTTAAGATCAAAGCCAGTAAGCTCCCAAAGAAGCACCCTCGCTGCATAGCCGACGGGAACGAGCTGCTGCGATTCTACGGTACGACAGTTGCGTGCTCTCTCGGCCTGAATGGCTCATCCAGCCTCTGCATATCGGAGAAATGCTGCGTGTGCAGGATCATACGTAACGGGTTCTCGGCAAAGACAGAGATGAAAGAAGGGATAGGTGTGTTCACAACTTCGACAAGCGCGAGAGCGTTCAGCTCAATTGAGGCGTCGGGAGGGGACGAGGGGATGACGAGAAAGGCGATGATAGTTTGCAGGGTGATTGCGGGGAGAGTTCACAGGCCATTAGAGAACATACAAGAAATGGCTGGGCAGACAGGGTTTGATTCATTGGCAGGCAAAGTTGGGTTGCATTCAAATATAGAAGAGCTTTATTTGCTCAATCCTAGAGCTTTGCTTCCATGTTTTGTGGTCATTTGCAAACCATGA 1311 48.74 MPTVWLSLKKSLHCKSEPSEVHNPKSRKNLGAILTRKTGGGGGGRSGCSRSIANLKDVIHGGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFHGGFSQDVPSAADPHGGSSFVGTLTPGTPGPGGHPTMHYFNPTLRSSSRKFPFREGFGTSNKSGGGARGGVGGGAHLSNRISLETEIGGNGSSSAVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQSGRIERVLKVHNMQRTLARFEEYRETVKIKASKLPKKHPRCIADGNELLRFYGTTVACSLGLNGSSSLCISEKCCVCRIIRNGFSAKTEMKEGIGVFTTSTSARAFSSIEASGGDEGMTRKAMIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLHSNIEELYLLNPRALLPCFVVICKP 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19100442 19102750 + Hsped.07g11100.1 Hepe07g1110 574505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1110 436 Gene3D - 226 435 - -
Hepe07g1110 436 FunFam C2H2-like zinc finger protein 225 435 - -
Hepe07g1110 436 SUPERFAMILY ADP-ribosylation 226 435 - -
Hepe07g1110 436 ProSitePatterns Zinc finger C2H2 type domain signature. 203 224 IPR013087 -
Hepe07g1110 436 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0889 Hepe-Chr5:28396646 Hepe07g1110 Hepe-Chr7:19100442 3.97e-13 dispersed
Hepe07g1110 Hepe-Chr7:19100442 Hepe07g1343 Hepe-Chr7:44107672 1.99e-73 dispersed
Hepe01g1619 Hepe-Chr1:81436104 Hepe07g1110 Hepe-Chr7:19100442 2.86e-61 transposed
Hepe02g2313 Hepe-Chr2:67059264 Hepe07g1110 Hepe-Chr7:19100442 5.87e-72 transposed
Hepe06g1658 Hepe-Chr6:67493750 Hepe07g1110 Hepe-Chr7:19100442 8.66e-30 transposed
Hepe08g0741 Hepe-Chr8:6672856 Hepe07g1110 Hepe-Chr7:19100442 5.11e-52 transposed
Hepe01g1317 Hepe-Chr1:78378817 Hepe07g1110 Hepe-Chr7:19100442 2.30e-203 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55968 None None None None Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1110 - - - 0.0