Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1128 ATGGCGGAGGAGTTTCAGAGCACTGGGAACTGGTGGGAAGCTTCTAGAAGCCCTTCCTCCTCCTCCATCACCACCTTCGTCGACCCTGCCGCCGACCCCATCATGGGCTTGGGCCTCGATTGGAACCAACCCCTCTTCCGCAGCGGTGGAGACAAGCCGCCGGACACCAGTTTCCGCTCGATGCTGCACCCGGATAATATGAATTTAAATATGCAACAGCAACAAATTCAATGGATGAGATCGGAGAAGCTTTATTCAGGGGAGTCTCCGGCCAACGAATTCAAGCCAATAAACAGAGGGTTTTCATTAGATCATCATCATAATCAACCTCACCCGCAGTTCAGCCCTCCTCACTACACTTCGGGGGACACAACATTACTACAAGGCTTGTTAGCCGGTGACCAACAGCAAGGGTCGGCCACGGGTATGAATAACTTCCCTTACACTGCCCATTTCGGGATGAACTCCGGCGAGTTAATGCCGGCGGCATCGTGGTCAACCTCTAAAGTGCCAGAGTTCTTAAGAAACTCGCCGCCGAAAGGGGCGGCTCCAGTAGCGCCGCACAGTCAGTTACAGTTTTCCAACAACACGGCGTTCTGGAACGCGTCGGATATGAAAGACGTGAGGCCCAGTTATTTTCCGGCGTCGTATAACCCAGGCGCCGCGGCAGCTTTCGCAGAGAAATCAAAGAATATATCGGAGGTTCGTGATTCGGGAACAGTAGTGAAAAAAAGTGGAAATAATCAGCAATCCGTTGCTGCACCTGCTAAAAGGCCTCGGAATGAAACTCCTTCGCCATTGCCAGCTTTTAAGGTCAGGAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAACTCGTTTCACCTTTCGGAAAGACTGATACAGCTTCAGTGCTGTCTGAAGCCATTGAATACATAAAGTTCCTCCATGAACAAGTCAGTGTTTTGAGCACTCCATATTTGAAGAGTGGAGCTGCAGTACAACAACACCAGCAGCAGAGTTGTGATAAAACAAAAGATGGAGAAGGAGGAAAACAAGATCTAAGAAGCAGAGGGCTTTGTTTAGTTCCAGTTTCAAGTACTTTTCCAGTCACTCACGAAACCACTGTTGATTTTTGGACTCCAACCTTCGGTGGAACCTTCAGATAA 1152 49.48 MAEEFQSTGNWWEASRSPSSSSITTFVDPAADPIMGLGLDWNQPLFRSGGDKPPDTSFRSMLHPDNMNLNMQQQQIQWMRSEKLYSGESPANEFKPINRGFSLDHHHNQPHPQFSPPHYTSGDTTLLQGLLAGDQQQGSATGMNNFPYTAHFGMNSGELMPAASWSTSKVPEFLRNSPPKGAAPVAPHSQLQFSNNTAFWNASDMKDVRPSYFPASYNPGAAAAFAEKSKNISEVRDSGTVVKKSGNNQQSVAAPAKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSGAAVQQHQQQSCDKTKDGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21387435 21390671 + Hsped.07g11280.1 Hepe07g1128 574523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1128 383 CDD bHLH_AtbHLH_like 267 318 IPR045239 -
Hepe07g1128 383 MobiDBLite consensus disorder prediction 242 268 - -
Hepe07g1128 383 SMART finulus 272 316 IPR011598 GO:0046983(InterPro)
Hepe07g1128 383 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 271 325 IPR036638 GO:0046983(InterPro)
Hepe07g1128 383 Gene3D - 271 336 IPR036638 GO:0046983(InterPro)
Hepe07g1128 383 MobiDBLite consensus disorder prediction 242 256 - -
Hepe07g1128 383 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 261 310 IPR011598 GO:0046983(InterPro)
Hepe07g1128 383 FunFam Transcription factor bHLH123 family 271 334 - -
Hepe07g1128 383 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 71 362 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Hepe07g1128 383 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1536 Hepe-Chr3:72214086 Hepe07g1128 Hepe-Chr7:21387435 1.19e-26 dispersed
Hepe04g1799 Hepe-Chr4:72946006 Hepe07g1128 Hepe-Chr7:21387435 7.40e-62 dispersed
Hepe05g1139 Hepe-Chr5:56379059 Hepe07g1128 Hepe-Chr7:21387435 1.91e-29 dispersed
Hepe07g1128 Hepe-Chr7:21387435 Hepe07g1980 Hepe-Chr7:63807806 2.24e-43 dispersed
Hepe01g0022 Hepe-Chr1:3611006 Hepe07g1128 Hepe-Chr7:21387435 8.16e-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1128 - - - 0.0