Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1185 ATGAATTGCTTTCAATGTTGCATGTCAGAGAAGAAAGTGAATAGGCTGTCTTTGAAAAAGAGCATCAAGGAGTATCAAGACACCAAAACTTTAGCCTCATTCGCCAACATTTCCTTTAAATCTGATGGCAGTCGGCGAAGGTACATAACTGAGGAAATTAAGAAGTTAGGAAAAGGAAACATCTCAGCTCAAACCTTTTCATTCTCCGATCTATCTACCGCCACAAATAACTTCAACCAAGAAAATCTGTTGGGGGAAGGTGGCTTTGGAAGGGTTTACAAAGGCATCATTGAGACCACAAAACAAGTAACCGCCGTGAAGCAACTTGACCGAAATGGATTTCAAGGAAACAGAGAATTCCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCCAATCTTGTGAGTCTTGTTGGGTATTGTGCTGATGGGGATCAGAGGATTTTGGTTTACGAGTACATGGCTAAAGGTTCCTTGGAGGATCATCTTCTCGATATAGCCTCAGATAAGGCGCCTCTCGACTGGAAGACAAGGATGAAAATTGCCGAAGGAGCCGCAAAAGGACTTGAATACTTACACGAAACCGCCAATCCTCCTGTCATATATCGCGATTTCAAAGCTTCAAACATATTGTTGGATGAGGAATTCAATCCAAAGCTCTCTGATTTTGGTCTTGCAAAGTTAGGTCCTACTGGGGATAAAACTCATGTTTCCACTAGAGTCATGGGAACCTATGGTTACTGTGCTCCTGAATATGCACTTACCGGACAATTGACCACCAAATCAGATGTTTACAGTTTCGGTGTGGTGTTTCTCGAGATTATAACTGGAAGAAGAGTTATAGACAATGCAAGACCAACGGCAGAACAAAATTTAATTACTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTTACCCTAATGGCAGATCCAAAGCTAGAAGGAAGTTACCCAGTGAAGGCTCTGTATCAAGCTCTGGCAGTGGCAGCCATGTGTTTACAAGAGGAATCGAATACTCGGCCATTGATCAGCGACGTGGTTACGGCTCTTGAATATTTAGCCGCAAACAAGGATATCGATGCAGACGGGGATAACGAATTAGAAACGGGATCAGGTTCAGGTTCTCCTGATAGAAGTAGTAAGAATGAAGATAAAAAAGTTGATGTTGAGGGTGATGAGAGAAATGACTTGACATGGACTCTCGATCTGTCATGCCACTATATGCCTGAATGGATGGATGTCTGGGAAGCCCCAAGTTGGAAGGTTTCCCATGGCTCGGTTCTTGATAAGCGTGTCCAAGCGAGCAGTGAAGCCAGATGA 1326 43.14 MNCFQCCMSEKKVNRLSLKKSIKEYQDTKTLASFANISFKSDGSRRRYITEEIKKLGKGNISAQTFSFSDLSTATNNFNQENLLGEGGFGRVYKGIIETTKQVTAVKQLDRNGFQGNREFLVEVLMLSLLHHPNLVSLVGYCADGDQRILVYEYMAKGSLEDHLLDIASDKAPLDWKTRMKIAEGAAKGLEYLHETANPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEIITGRRVIDNARPTAEQNLITWAQPLFKDRRKFTLMADPKLEGSYPVKALYQALAVAAMCLQEESNTRPLISDVVTALEYLAANKDIDADGDNELETGSGSGSPDRSSKNEDKKVDVEGDERNDLTWTLDLSCHYMPEWMDVWEAPSWKVSHGSVLDKRVQASSEAR 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28179256 28182108 + Hsped.07g11850.1 Hepe07g1185 574580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1185 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1185 441 Pfam Protein kinase domain 79 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1185 441 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524(InterPro)
Hepe07g1185 441 FunFam probable serine/threonine-protein kinase RLCKVII 50 154 - -
Hepe07g1185 441 CDD STKc_IRAK 84 353 - -
Hepe07g1185 441 Gene3D Transferase(Phosphotransferase) domain 1 155 372 - -
Hepe07g1185 441 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1185 441 MobiDBLite consensus disorder prediction 363 393 - -
Hepe07g1185 441 Gene3D Phosphorylase Kinase; domain 1 39 154 - -
Hepe07g1185 441 FunFam Serine/threonine-protein kinase PBS1 155 369 - -
Hepe07g1185 441 PANTHER OS07G0668900 PROTEIN 41 375 - -
Hepe07g1185 441 SUPERFAMILY Protein kinase-like (PK-like) 62 350 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0998 Hepe-Chr5:45849468 Hepe07g1185 Hepe-Chr7:28179256 3.41e-90 dispersed
Hepe05g1473 Hepe-Chr5:64166351 Hepe07g1185 Hepe-Chr7:28179256 1.43e-167 dispersed
Hepe06g0497 Hepe-Chr6:28751390 Hepe07g1185 Hepe-Chr7:28179256 2.14e-220 dispersed
Hepe06g1881 Hepe-Chr6:70014497 Hepe07g1185 Hepe-Chr7:28179256 9.15e-97 dispersed
Hepe07g1185 Hepe-Chr7:28179256 Hepe10g1128 Hepe-Chr10:44681528 1.58e-151 dispersed
Hepe10g0230 Hepe-Chr10:2432494 Hepe07g1185 Hepe-Chr7:28179256 9.67e-80 dispersed
Hepe03g1280 Hepe-Chr3:68312899 Hepe07g1185 Hepe-Chr7:28179256 1.24e-162 transposed
Hepe01g0239 Hepe-Chr1:36446333 Hepe07g1185 Hepe-Chr7:28179256 1.30e-10 wgd
Hepe02g2209 Hepe-Chr2:62428442 Hepe07g1185 Hepe-Chr7:28179256 8.69e-59 wgd
Hepe07g1185 Hepe-Chr7:28179256 Hepe09g1372 Hepe-Chr9:22427096 2.56e-132 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72945 PF00069 Pkinase 4.30E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1185 - - - 0.0