Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1196 ATGCAATTGCCAATGCCAGATTCCATCTCCCTTTCCCTTCTCATTTCCCTTCTCATTTTCTCCCAATTCTCTCCCTCTTCCGCACAAGATTATATAATCGGGGACGGCGTTGCCAGCAGCAGCCTTGGCGGCGGCGGCGGCGATGACGGCGACGAGGCCAAGGGGAAGTCACACGCCCCCCCGCCGGAGCAGAACGACTGCAATGGCATATTCTTGTCGTACACTTTCATCACGCGTGAGAAGGAGCTGCCACGGCTGAAGAACGCGACGGCCCAGGCATGGGCCTTCAGATCGCAGGTGATGATCCTGAACGCCGGACTGACGGAGCTGAAGGGGTGGAAGGTGTACATCGGATTCCACCACGGGGAGATTCTGGTATCGGCGGACGGCGCCGTGGTCATGGATGGCTCGGATTTCCCTGTGGACGTTGGGAACGGGACCACTCTAGCTGGGTCGTCGATGACGGATCTGAAAACTTCGATTGAGACCGCCGGAGATATGAATCAGATTCAGGCGATGATTGATATCACCGGAACGCAGTTCGGCATCAAGCCACCTGGCGTTCCGATGCCTAAGACCATTCGCCTTGCTAATGATGGATTTAAATGCCCTGTGCCTCGCAATCGCGGTAAAAGATCAATGCATGTATGCTGCAAAAAGGATCCAAAGTACAAGGTGAAACCACCCAAGAAAACTAAATTTTTCCCTCGCCAAGATGGAGATCTCTCAATCACCTATGATGTGATGCAAGCTTTTGGAAACAACTATCTTGCTCAAGTTACGATCGACAACAATAATCCGCTCGGCCGACTCGATCACTGGAACTTAACCTGGGAATGGAAGAATGGAGAGTTCATTCAAAGCATGAGAGGAGCATATACTCATACAAGAGACTTGGCTGAATGCGTTTACGGTCCTGCAGGCACTTACTATCAAGATTTCGACTTCACTCAGGTCATGAGTTGTGATAAGAGGCCGGTGATCGCAGATCTTCCAGCCGATCGAATCAACGACGATAAGGTGGGGAAATTGCCATATTGTTGTAGGAATGGAAGCTTGTTGCCAACAGTGATGGATGAGAGCAAATCAAGGTCTATTTTTCAACTACAAGTCTTTAAGCTTCCACCAGACATGAACCGAACGGCTCTTACTCCACCCCAGAAATGGAAGATCTCGGGGATTCTGAACCCGAAATACGTTTGCGCCGCTCCGCTCCGAGTCGACCCGTCGGATTTTCCAGACCCGACGGGGCTTCAGGCATCGAGTACGGCCATCGCAACTTGGCAAATTGTGTGCAACATTACAAGGCCAAAGGTGAAGCAGTCAAAATGTTGTGTTTCATTTTCAGCATACTATAATGACAGTGTAATTCCTTGCAATACTTGTGCCTGTGGATGTGAAGACATTAATACTGCTACTTGCAATCCAAATGCACATCCAATGTTGCTCCCTCCAGAAGCACTTTTGGTTCCATTTCATAACAGGACAGCAAAGGCAAGAGCTTGGGCTAAAATTAAACACTACCCAAATCCAAAGAAGATGCCTTGTCCTGATAACTGTGGAGTTAGCCTGAATTGGCATATTAACTCTGACTATACTAGTGGATGGACTGCAAGACTAACTCTCTTCAACTGGGAAGATTATCCATTTGAGGACTGGTTTACTGCTGTTCAAATGAACAAGGCCGGTCACGGTTACGAAAACGTCTATTCCTTCAACGGAACCCGGCTTCCCCACATCAAAAATACCATCTTCCTCCAAGGCTTGCCTGGTTTAGCATACTTGATGGGAGAAGTCAATGGAACCAATCCTATCTACGATCCAAGAGTTCCAGGAAAGCAGCAATCGGTCATTTCTTTCACTAAGAAGGGCCTGCACGACATCGACATACAACGAGGCGACGGTTTCCCAATCAAAGTCTTTTTCAATGGCGAAGAATGTGCACTTCCAAAGGAGATTCCCATTGCTAGTTCAGCCCACCGCTGTCGCCACGACGCTTTCATGCCCCTCCTCTTCATCTTAGCCATTTCTTTCGCACTCATAAGGCCGGATCGCTTCCATTGA 2064 48.93 MQLPMPDSISLSLLISLLIFSQFSPSSAQDYIIGDGVASSSLGGGGGDDGDEAKGKSHAPPPEQNDCNGIFLSYTFITREKELPRLKNATAQAWAFRSQVMILNAGLTELKGWKVYIGFHHGEILVSADGAVVMDGSDFPVDVGNGTTLAGSSMTDLKTSIETAGDMNQIQAMIDITGTQFGIKPPGVPMPKTIRLANDGFKCPVPRNRGKRSMHVCCKKDPKYKVKPPKKTKFFPRQDGDLSITYDVMQAFGNNYLAQVTIDNNNPLGRLDHWNLTWEWKNGEFIQSMRGAYTHTRDLAECVYGPAGTYYQDFDFTQVMSCDKRPVIADLPADRINDDKVGKLPYCCRNGSLLPTVMDESKSRSIFQLQVFKLPPDMNRTALTPPQKWKISGILNPKYVCAAPLRVDPSDFPDPTGLQASSTAIATWQIVCNITRPKVKQSKCCVSFSAYYNDSVIPCNTCACGCEDINTATCNPNAHPMLLPPEALLVPFHNRTAKARAWAKIKHYPNPKKMPCPDNCGVSLNWHINSDYTSGWTARLTLFNWEDYPFEDWFTAVQMNKAGHGYENVYSFNGTRLPHIKNTIFLQGLPGLAYLMGEVNGTNPIYDPRVPGKQQSVISFTKKGLHDIDIQRGDGFPIKVFFNGEECALPKEIPIASSAHRCRHDAFMPLLFILAISFALIRPDRFH 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28357473 28360334 + Hsped.07g11960.1 Hepe07g1196 574591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1196 687 MobiDBLite consensus disorder prediction 43 66 - -
Hepe07g1196 687 PANTHER COBRA-LIKE PROTEIN 7 12 680 - -
Hepe07g1196 687 Pfam COBRA-like protein 256 435 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Hepe07g1196 687 SUPERFAMILY Carbohydrate-binding domain 238 289 IPR008965 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1303 Hepe-Chr1:78236816 Hepe07g1196 Hepe-Chr7:28357473 4.88e-264 dispersed
Hepe05g1403 Hepe-Chr5:62902835 Hepe07g1196 Hepe-Chr7:28357473 1.89e-270 dispersed
Hepe07g1196 Hepe-Chr7:28357473 Hepe09g0285 Hepe-Chr9:2448414 1.10e-28 dispersed
Hepe07g1196 Hepe-Chr7:28357473 Hepe07g2448 Hepe-Chr7:68827158 4.74e-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1196 - - - 0.0