Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1296 ATGGAACCTCAGTCACCAATTAGCACAAGGGCTTGTTCTTCAAATCAAGGATTCGACCAAAATCATCATCTTCTTCAAATTCAACATTTTCAGACTGAGATGGAAGAACACCATGCCTTCACAACACACCAACATCAATCCCCTGCCAAACAAAAGAGAAAAGGAGCTGGTTCAACATCAGAGAGGCAACTTGATGCAAAGACACTGAGACGATTGGCCCAAAACAGAGAAGCTGCAAGAAAGAGCCGTCTGAGGAAGAAGGCTTATATTCAGCAGCTTGAGTCCAGTAGAATCAAGCTCTCTCAGCTTGAACAAGATCTCCATAGAGCACGTTCTCAGGGATTGTTTTTTGGTGCTTGTGGTGGTGTTATGGGTGGCAATCTCAGCTCCGGAGCTGCAATGTTTGACATGGAGTATGCACGGTGGCTAGACGACGACCACCGTCTGATGGTAGAGCTGCGGACGGCGCTGCACGGGCATCTCCCGGACGGCGATCTCCGAGCAATAGTAGACAGTTACATCTCTCACTACGACGAAATATTTCTCCTGAAAGGCGTGGCGGCGAAGTCGGATGTGTTTCATCTGATCACTGGAATGTGGATGACTCCGGCGGAGCGTTGCTTCCTGTGGATCGGCGGATTCCGGCCATCCAAGTTGATAGAGATGCTAATTCCACAATTAGACACATTAACAGAGCAACAAGCAGTGGGAATATGTAATTTGCAAAGATCTTCACAAGAAACAGAGGATGCTCTGTATCAGGGCCTTGAGCAGCTGCAGCATTCTCTCATCCTCACCATCGCTGGCACCGCGGTCGTCGACGGAATCAACCATATGGCCCTCGCCGCCGGCAAGCTCTCCAATCTTGAAGGCTTCATCCGCCAGGGTGATATGTTGAGACAACAAACACTTCATCAATTGCGTCGAATATTGACAGTCCGACAGGCAGCGAGATGTTTCGTTGTAATCGGAGAGTACTATGGAAGGCTTCGAGCTCTTAGTTCGTTGTGGGTCTCTCGACCAAGAGAGAGCTGCCTGAATGATGAAAATTCATGCCAAACAACAACAGAGCTGCAGATGCTTCAGAGTTCCCACAACCACTTCCCAAACTTTTGA 1116 48.66 MEPQSPISTRACSSNQGFDQNHHLLQIQHFQTEMEEHHAFTTHQHQSPAKQKRKGAGSTSERQLDAKTLRRLAQNREAARKSRLRKKAYIQQLESSRIKLSQLEQDLHRARSQGLFFGACGGVMGGNLSSGAAMFDMEYARWLDDDHRLMVELRTALHGHLPDGDLRAIVDSYISHYDEIFLLKGVAAKSDVFHLITGMWMTPAERCFLWIGGFRPSKLIEMLIPQLDTLTEQQAVGICNLQRSSQETEDALYQGLEQLQHSLILTIAGTAVVDGINHMALAAGKLSNLEGFIRQGDMLRQQTLHQLRRILTVRQAARCFVVIGEYYGRLRALSSLWVSRPRESCLNDENSCQTTTELQMLQSSHNHFPNF 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40945645 40949107 - Hsped.07g12960.1 Hepe07g1296 574691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1296 371 MobiDBLite consensus disorder prediction 37 69 - -
Hepe07g1296 371 MobiDBLite consensus disorder prediction 55 69 - -
Hepe07g1296 371 FunFam BZIP family transcription factor 66 115 - -
Hepe07g1296 371 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 65 109 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g1296 371 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 70 85 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g1296 371 SUPERFAMILY Leucine zipper domain 67 108 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g1296 371 PANTHER TRANSCRIPTION FACTOR TGA9 29 344 - -
Hepe07g1296 371 Coils Coil 86 113 - -
Hepe07g1296 371 SMART brlzneu 63 129 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g1296 371 Gene3D - 66 114 - -
Hepe07g1296 371 Pfam bZIP transcription factor 66 107 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g1296 371 ProSiteProfiles DOG1 domain profile. 132 340 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe07g1296 371 Pfam Seed dormancy control 150 224 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1296 Hepe-Chr7:40945645 Hepe08g0225 Hepe-Chr8:1986057 8.61e-142 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55972 PF14144 DOG1 2.80E-29 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1296 K14431 - csv:101204604 654.055