Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe07g1374 | ATGGATGAGAATGGGGGGATGAAGTTGAGTGGTATCCGCCAGGTTTTGAGGCTCAAACAAACTCTCCAACACTGGCAAGGCATCACCAAAGCCACATCATCCCATGGAAATCCAAATCATGGGATCCTTTCACCGGCAATCAGCAAAAGGCTGAAGAATGTGTTGTGGTGTGATTCGGATGAGGAAAGCTGCCAGACTCCTGAACATCCACCCGATGTCCCCAAAGGCTATTTGGCTGTTTATGTTGGCCCTGAGCTACGGAGGTTTATCATTCCCACCACCTATCTTAGCCATTCAGTCTTCAAGGTGTTGCTGGAAAAGGCGGAGGAGGAGTTTGGATTCGATCATTGCGGCGCCCTCACATTACCATGCGAGATCGAAACCTTCAAATATCTTCTCAACTGCATCCACACCCACCACAAGGATCATCATCCTCATCCTGATCACCACACCCCAGCTGCCACTTCTTTAACAATGGAAGGATAA | 486 | 48.77 | MDENGGMKLSGIRQVLRLKQTLQHWQGITKATSSHGNPNHGILSPAISKRLKNVLWCDSDEESCQTPEHPPDVPKGYLAVYVGPELRRFIIPTTYLSHSVFKVLLEKAEEEFGFDHCGALTLPCEIETFKYLLNCIHTHHKDHHPHPDHHTPAATSLTMEG | 161 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 44929917 | 44930509 | - | Hsped.07g13740.1 | Hepe07g1374 | 574769 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe07g1374 | 161 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 18 | 136 | IPR003676 | GO:0009733(InterPro) | |
| Hepe07g1374 | 161 | MobiDBLite | consensus disorder prediction | 140 | 161 | - | - | |
| Hepe07g1374 | 161 | Pfam | Auxin responsive protein | 17 | 136 | IPR003676 | GO:0009733(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g0050 | Hepe-Chr1:6317690 | Hepe07g1374 | Hepe-Chr7:44929917 | 1.13e-114 | dispersed | |
| Hepe02g2947 | Hepe-Chr2:78717841 | Hepe07g1374 | Hepe-Chr7:44929917 | 1.76e-19 | dispersed | |
| Hepe04g1042 | Hepe-Chr4:65055121 | Hepe07g1374 | Hepe-Chr7:44929917 | 6.22e-17 | dispersed | |
| Hepe05g0390 | Hepe-Chr5:4853566 | Hepe07g1374 | Hepe-Chr7:44929917 | 2.24e-19 | dispersed | |
| Hepe05g2057 | Hepe-Chr5:71056875 | Hepe07g1374 | Hepe-Chr7:44929917 | 3.04e-17 | dispersed | |
| Hepe06g0823 | Hepe-Chr6:55025014 | Hepe07g1374 | Hepe-Chr7:44929917 | 1.82e-17 | dispersed | |
| Hepe07g1374 | Hepe-Chr7:44929917 | Hepe08g0913 | Hepe-Chr8:8408959 | 1.51e-11 | dispersed | |
| Hepe01g2106 | Hepe-Chr1:85682686 | Hepe07g1374 | Hepe-Chr7:44929917 | 3.84e-21 | transposed | |
| Hepe10g1042 | Hepe-Chr10:41443367 | Hepe07g1374 | Hepe-Chr7:44929917 | 3.82e-13 | wgd | |
| Hepe04g0237 | Hepe-Chr4:44911870 | Hepe07g1374 | Hepe-Chr7:44929917 | 5.91e-12 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe07g1374 | K14488 | - | csv:101207913 | 243.817 |