Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1387 ATGGAGCTGACTACTCAAGATCCTCCAATTTCCATCCCCATTCCCATCCCTTTAAATAGTCGTTACGGCGGTCACGACCACGACCACATCATCCACCATCATGACCCCTCCATCACGCGCAACCACATCATCGCGGCGGCGGTCAACGGTGGCAGTCCACTCCCAACCTCTCAAATGGAAGCTGATCTCCACCACCACAATCACCACCATAATAACAACAATAACAACAGTACCAACAAGAAGCATGTCAAATACAAAGAGTGTCTCAAAAATCACGCCGCCTCCATGGGAGGCAATGCCACCGATGGCTGCGGCGAGTTCATGCCGAGTGGAGAAGAAGGCTCCATTGAAGCCCTCACATGCTCTGCCTGCAACTGTCACAGAAACTTCCACCGGAAAGAGATCGACGGGGAGTCCTATGACTGGCTCCACCACCCCCGCCTCGGGCGGAAGCTCCTCGTCGGAGGGAAGAACATGATCGCCCCGCCAGAGGCCGCCGCATTTGCGTATCCCACCGCAGCGGGGACAGCGTTCATATCATCCAGAGCAGCGGCAGCACAACCCCACCACATGATAATGTCGTACAACATGCTCGGCGGGGGAGGCGGGCACTCGGAGTCGGAGGACCAGGAGGAGGCAGCAGGTCCTGGGAATGGGGCGAGGGCGTATTCGGGGCACATGATGAATAAGAAGCGGTTCCGAACGAAGTTCACGGCGGAGCAGAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAGAAGCAAGAAGAGAGTGTGGTGCAGCAATTCTGTCAAGAGATTGGAGTGAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAACAAGCACAATCTTGCCAAGAAGGATACTATTTCCCCTTCCCAGTCTCCTACTCCCTTAAATTAA 918 53.92 MELTTQDPPISIPIPIPLNSRYGGHDHDHIIHHHDPSITRNHIIAAAVNGGSPLPTSQMEADLHHHNHHHNNNNNNSTNKKHVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIDGESYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPTAAGTAFISSRAAAAQPHHMIMSYNMLGGGGGHSESEDQEEAAGPGNGARAYSGHMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTISPSQSPTPLN 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 45655355 45656555 + Hsped.07g13870.1 Hepe07g1387 574782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1387 305 MobiDBLite consensus disorder prediction 201 224 - -
Hepe07g1387 305 FunFam Zinc-finger homeodomain protein 2 218 291 - -
Hepe07g1387 305 Gene3D - 217 292 - -
Hepe07g1387 305 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 85 134 IPR006456 -
Hepe07g1387 305 Pfam ZF-HD protein dimerisation region 83 135 IPR006456 -
Hepe07g1387 305 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 65 288 - GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER)
Hepe07g1387 305 NCBIfam homeobox domain, ZF-HD class 230 286 IPR006455 -
Hepe07g1387 305 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 84 135 IPR006456 -
Hepe07g1387 305 SUPERFAMILY Homeodomain-like 218 291 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3166 Hepe-Chr2:81147527 Hepe07g1387 Hepe-Chr7:45655355 3.53e-21 dispersed
Hepe07g1387 Hepe-Chr7:45655355 Hepe10g0633 Hepe-Chr10:7943709 6.76e-53 dispersed
Hepe02g2004 Hepe-Chr2:42036196 Hepe07g1387 Hepe-Chr7:45655355 2.58e-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55977 PF04770 ZF-HD_dimer 3.00E-29 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1387 - - - 0.0