Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1446 ATGGCAGCGCCGACAAGTGATGGCGGTGGTGGTCTTCGCGCCGGTGGCGGTGGTGGTTTCGTCGGATCTCGGTGTTGGATGAGGACTGGTCGCCGTGGTCTGGTTGTGACAGGAAAATCCCTGCCATTCCCCATTCGTGAACCCCATCACCTCACGGTGATTTTGGTAACTCGATCCCGCAGTAGGATCTTCAGAGAAAGGAGAATACGCGCGCAAGGGAAGAAGACTATGGCTTTAACAGCCCCAGGGCAGCTCAACGTTAACGAGTCCCCTTCCTGGGGATCTAGAAGTGTCGACTGCTTCGAAAAACTTGAGCAGATTGGCGAAGGCACTTATGGTCAAGTTTACATGGCCAGAGAATTACAAACTGGTGAAATTGTTGCACTGAAGAAAATACGAATGGATAATGAGAGGGAGGGGTTCCCTATTACTGCCATACGAGAAATCAAAATTCTAAAGAAGCTCCATCATGAAAATGTAATCAAGTTGAAAGAGATTGTGACATCTCCAGGTCCTGAGAAGGATGAACAAGGGAAGCCAGATGGTAACAAGTACAAAGGTGGCATCTACATGGTTTTCGAGTACATGGACCATGATTTGACAGGTCTTGCTGATCGTCCAGGGATGAGGTTTTCAGTTCCCCAAATCAAGTGCTACATGAAGCAGCTTCTCACAGGGCTTCACTATTGTCATGTAAATCAAGTATTGCATAGGGATATAAAAGGCTCAAATCTGCTTATTGACAATGAAGGAAATCTGAAGCTTGCCGATTTTGGGCTTGCCCGATCGTTTTCTAATGATCACAATGCAAATCTAACAAATCGTGTCATTACCTTATGGTACAGACCTCCTGAATTGCTGCTTGGGTCAACAAAATATGGTCCAGCTGTAGACATGTGGTCTGTTGGTTGTATTTTTGCAGAGCTTCTACATGGGAAGCCAATATTCCCTGGCAAGGATGAGCCGGAGCAATTAAATAAGATCTTTGAGCTATGTGGTGCTCCGGATGAAGTCAATTGGCCTGGGGTTTCTAAAATCCCTTGGTACAACAATTTCAAGCCCACAAGGCCGATGAAGAGACGTCTTAGAGAAGTTTTCAGGCATTTTGATCGTCATGCTTTAGAACTGTTGGAGAAGATGCTCACTCTTGATCCTTCTCAGAGGATATCTGCCAAGGATGCCCTAGATGCGGAGTATTTTTGGACAGATCCATTACCTTGTGACCCTAAGAGTTTACCCACGTATGAAGCATCACACGAGTTCCAGACAAAGAAGAAACGTCAACAGCAACGACAACATGAAGAAACTGCAAAGCGACAGAAGTTGCAACACCCACAGCATGCACGCCTTCCACCTATTCAGCAGTCGGGGCAAGCTCATGCACAGATGCGACCGGTACCTAACCAACCTATTCATGGGTCTCAACCGCCAGTTGCTGCAGGGCCTAGCCATCATTTTGGGGGGAAGCCTCGTGGACCCCCAGGTCCTGGTAGGTATCCCTCAGGTGGAAATCCACCTTCTGGATACAATCACCCAAGTCGTGGTGGTCAAGGTGGGGGTGGTTATGGCAACACACAATATGCTCAGGGACGAGGTGCACCCTATGGGTCTGGTAACATGCCTGGTGCTGGTCCCCGAGGTGGAGCTGGAGGTGGTGGTGGTGGTGGTGGTTATGGCGCAGGAGCTCCAAATTACCCACAGAATGGTCCATATGCTGGTAGTTCTGGTACTGGTCGTGGCTCCAATGCGATGGGCGGAAACCGAAACCAACAATATGGGTGGCAACAGTGA 1791 48.58 MAAPTSDGGGGLRAGGGGGFVGSRCWMRTGRRGLVVTGKSLPFPIREPHHLTVILVTRSRSRIFRERRIRAQGKKTMALTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMARELQTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQQQRQHEETAKRQKLQHPQHARLPPIQQSGQAHAQMRPVPNQPIHGSQPPVAAGPSHHFGGKPRGPPGPGRYPSGGNPPSGYNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMPGAGPRGGAGGGGGGGGYGAGAPNYPQNGPYAGSSGTGRGSNAMGGNRNQQYGWQQ 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47922444 47936230 + Hsped.07g14460.1 Hepe07g1446 574841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1446 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1446 596 ProSiteProfiles Protein kinase domain profile. 101 400 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1446 596 MobiDBLite consensus disorder prediction 568 596 - -
Hepe07g1446 596 MobiDBLite consensus disorder prediction 449 463 - -
Hepe07g1446 596 SUPERFAMILY Protein kinase-like (PK-like) 95 408 IPR011009 -
Hepe07g1446 596 FunFam Cyclin-dependent kinase C-2 88 197 - -
Hepe07g1446 596 Gene3D Transferase(Phosphotransferase) domain 1 198 440 - -
Hepe07g1446 596 Gene3D Phosphorylase Kinase; domain 1 88 197 - -
Hepe07g1446 596 MobiDBLite consensus disorder prediction 411 596 - -
Hepe07g1446 596 MobiDBLite consensus disorder prediction 419 442 - -
Hepe07g1446 596 Pfam Protein kinase domain 101 400 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1446 596 FunFam Cyclin-dependent kinase C-2 198 440 - -
Hepe07g1446 596 PANTHER CELL DIVISION PROTEIN KINASE 101 400 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Hepe07g1446 596 SMART serkin_6 101 400 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1446 596 CDD STKc_CDK9_like 101 400 - -
Hepe07g1446 596 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1446 Hepe-Chr7:47922444 Hepe07g2089 Hepe-Chr7:65183008 2.25e-112 dispersed
Hepe03g0692 Hepe-Chr3:16715143 Hepe07g1446 Hepe-Chr7:47922444 3.29e-08 transposed
Hepe08g0036 Hepe-Chr8:270675 Hepe07g1446 Hepe-Chr7:47922444 0.0 transposed
Hepe01g0473 Hepe-Chr1:61566435 Hepe07g1446 Hepe-Chr7:47922444 4.11e-47 wgd
Hepe02g1806 Hepe-Chr2:26778252 Hepe07g1446 Hepe-Chr7:47922444 6.89e-35 wgd
Hepe06g0383 Hepe-Chr6:14344402 Hepe07g1446 Hepe-Chr7:47922444 1.81e-116 wgd
Hepe06g0149 Hepe-Chr6:5436753 Hepe07g1446 Hepe-Chr7:47922444 5.33e-92 wgd
Hepe07g1035 Hepe-Chr7:14915394 Hepe07g1446 Hepe-Chr7:47922444 4.56e-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72950 PF00069 Pkinase 5.30E-75 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1446 K08819 - csv:101220936 955.281