Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1580 ATGGCTTTGTGGGACTTCTTTCTATTGGGGTTTTTCTTCTTCATCTTTGGTTCTTTTTCACTTGCTCGTGCTCTCACTGATGCTTCTGATGTTCAAGCTTTGCAAGTTATATACACCTCATTGAATAGTCCTCCTCAGCTGACTGGTTGGATTAGTAGTGGCGGCGATCCATGTGCAGGGTCATGGAAAGGGGTGACTTGTGATGGCTCTAAAGTTGTTTCCATTGAGATTTCTGGGTTAGGGCTGAATGGCACAATGGGTTATGCGCTCTCGAGTCTCTTGTCATTGAAAAATCTTGATATGAGCGACAACGATATTCATGACACGATTCCTTACCAATTACCGCCGAACCTCATGAGCCTAAATATGGCAAAAAACAACTTAAGTGGTAATCTTCCTTATTCCATTTCCACCATGGCTTCTCTCAATTATCTGAATATGAGCCGTAATATGCTATCTCAGGCGATAGGAGATGTTTTCACCAATATTACTACCCTGGGGACCTTGGACCTTTCTTTCAACAACTTTACTGGGGATCTTCCTAAATCCTTGAGCTCATTATCCAACGTTTCTTCCCTCTTTTTGCAGAACAACCAATTGACTGGTTCTCTCAACAATCTTATCAGTTTGCCTCTGACCACTCTAAATGTAGCAAATAATCATTTCAGTGGATGGATACCTCAAGAACTGAAGTCAATTGAAAATTTCATATCCGATGGAAATTCATTTGACAATAGTCCTGCACCTCCTCCACCAGCTTTTACTCCACCTCCTCCTGGTAGATCTCGTAACAGCCCCAAACATCCTGGGTCTGGCGGTGGCACCCATACTCCCCCAAGTTCTGATGGAAGCTCATCCCACTCGAACAAAGGCTTGCCAGTTTTGGCTATAGTGGGGATAATTTTGGGTGCTATAATTTTTGTCCTCATTGTGTTAGTTGCTTTTGCTGTATGCATCCAGAAGAGAAAACGGAAGAACATTGGTCTAAGAGCTTCCAGTGGAAGGCTGTCTATTGGCACTAGTGTGAATGCTGAGGTGCAAGAGCCTCGGGTAAAAAGCATTGCTGCTGTTGCAGACATTAAGCCTCTTCCTGCAGAGAAAATGAATCCGGAGAGATTACAAGCGAAAAATGGATCAGTGAAAAGAATAAAGTCCCCTATTACTGCTACTTCTTACACTGTTGCTTCTCTTCAAAGTGCAACAAATAGCTTTAGCCAAGAATGCATAGTTGGTGAAGGTTCTCTCGGCCGTGTTTACAAAGCTGAGTTTCAAAACGGGAAGACAATGGCAATTAAGAAAATCGACAATGCAGCATTGTCACTACAGGAAGAAGACAATTTTCTTGAAGCGGTTTCAAACATGTCAAGATTAAGGCATACAAACATTGTCACACTAAATGGTTATTGTGCAGAGCATGGTCAGCGTCTTCTAGTTTATGAGTTCATTGGAAATGGAAGTTTACATGACATGCTCCATTTTGTTGAAGATAGTTGTAAGACACTGACTTGGAATGCACGTGTCCGGGTAGCACTTGGAACCGCTAGAGCTTTAGAATACTTGCATGAGGTTTGCTTGCCTTCTGTTGTACATAGAAATTTGAAGACTGCAAACATATTACTTGATGAAGAACTCAACCCCCATTTGTCAGATTGTGGCTTGGCTGCTTTAACACCCAACACAGAGCGGCAGGTTTCTACTCAGATGGTTGGTTCCTTTGGCTATAGTGCTCCGGAATTCGCCTTGTCAGGAATATACACGGTCAAAAGTGACGTGTACAGCTTTGGGGTGGTGATGTTGGAGCTCTTGACTGGCCGAAAGCCGCTTGACAGTTCCAGGGCGAGATCAGAGCAGTCACTAGTGAGATGGGCTACTCCCCAACTTCATGATATCGACGCCTTAGCAAAAATGGTAGATCCTACTTTGAACGGAATGTACCCTGCAAAGTCTCTGTCGCGCTTTGCCGATATCATTGCTCTCTGTGTTCAGCCTGAGCCCGAGTTTCGACCTCCGATGTCTGAAGTAGTACAAGCATTGGTGCGTTTAGTGCAAAGAGCCAGTGTGGTAAAAAGGCATTCGAGCGACGAGTCGGGTTTCTCTTACAAAACGCCCGACCACGATGCAGTTGAGTTGCCATTTTGA 2139 43.99 MALWDFFLLGFFFFIFGSFSLARALTDASDVQALQVIYTSLNSPPQLTGWISSGGDPCAGSWKGVTCDGSKVVSIEISGLGLNGTMGYALSSLLSLKNLDMSDNDIHDTIPYQLPPNLMSLNMAKNNLSGNLPYSISTMASLNYLNMSRNMLSQAIGDVFTNITTLGTLDLSFNNFTGDLPKSLSSLSNVSSLFLQNNQLTGSLNNLISLPLTTLNVANNHFSGWIPQELKSIENFISDGNSFDNSPAPPPPAFTPPPPGRSRNSPKHPGSGGGTHTPPSSDGSSSHSNKGLPVLAIVGIILGAIIFVLIVLVAFAVCIQKRKRKNIGLRASSGRLSIGTSVNAEVQEPRVKSIAAVADIKPLPAEKMNPERLQAKNGSVKRIKSPITATSYTVASLQSATNSFSQECIVGEGSLGRVYKAEFQNGKTMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHTNIVTLNGYCAEHGQRLLVYEFIGNGSLHDMLHFVEDSCKTLTWNARVRVALGTARALEYLHEVCLPSVVHRNLKTANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHSSDESGFSYKTPDHDAVELPF 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 54699284 54705279 - Hsped.07g15800.1 Hepe07g1580 574975

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1580 712 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 482 692 - -
Hepe07g1580 712 MobiDBLite consensus disorder prediction 268 288 - -
Hepe07g1580 712 ProSiteProfiles Protein kinase domain profile. 404 681 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1580 712 Pfam Protein kinase domain 407 676 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1580 712 SUPERFAMILY Protein kinase-like (PK-like) 384 678 IPR011009 -
Hepe07g1580 712 CDD STKc_IRAK 410 681 - -
Hepe07g1580 712 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 369 481 - -
Hepe07g1580 712 MobiDBLite consensus disorder prediction 241 288 - -
Hepe07g1580 712 Gene3D Transferase(Phosphotransferase) domain 1 482 705 - -
Hepe07g1580 712 MobiDBLite consensus disorder prediction 245 264 - -
Hepe07g1580 712 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 207 683 IPR046959 -
Hepe07g1580 712 Gene3D Phosphorylase Kinase; domain 1 365 481 - -
Hepe07g1580 712 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 27 254 - -
Hepe07g1580 712 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Hepe07g1580 712 Pfam Leucine Rich Repeat 212 232 IPR001611 GO:0005515(InterPro)
Hepe07g1580 712 Pfam Leucine Rich Repeat 166 187 IPR001611 GO:0005515(InterPro)
Hepe07g1580 712 Pfam Leucine Rich Repeat 117 138 IPR001611 GO:0005515(InterPro)
Hepe07g1580 712 SUPERFAMILY L domain-like 26 233 - -
Hepe07g1580 712 Gene3D Ribonuclease Inhibitor 26 255 IPR032675 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1580 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1584 Hepe-Chr2:21031314 Hepe07g1580 Hepe-Chr7:54699284 6.96e-183 dispersed
Hepe03g1378 Hepe-Chr3:70423070 Hepe07g1580 Hepe-Chr7:54699284 1.99e-145 dispersed
Hepe04g1828 Hepe-Chr4:73243272 Hepe07g1580 Hepe-Chr7:54699284 9.05e-106 dispersed
Hepe05g0548 Hepe-Chr5:7566881 Hepe07g1580 Hepe-Chr7:54699284 6.51e-122 dispersed
Hepe05g0549 Hepe-Chr5:7576090 Hepe07g1580 Hepe-Chr7:54699284 3.79e-41 dispersed
Hepe07g1580 Hepe-Chr7:54699284 Hepe01g2343 Hepe-Chr1:87975029 2.20e-82 dispersed
Hepe04g0052 Hepe-Chr4:21615158 Hepe07g1580 Hepe-Chr7:54699284 7.87e-17 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe02g0159 . 34 783 Strubbelig Receptor Gene Family AT4G03390 61.7 3.8e-208 721.8
Hepe04g1828 . 29 752 Strubbelig Receptor Gene Family AT4G03390 55.1 8.7e-160 561.2
Hepe02g2146 . 22 616 Strubbelig Receptor Gene Family AT1G78980 52.0 3.1e-164 575.9
Hepe02g1584 . 30 715 Strubbelig Receptor Gene Family AT1G78980 52.2 7.1e-153 538.1
Hepe03g1378 . 18 702 Strubbelig Receptor Gene Family AT1G78980 51.3 6.9e-132 468.4
Hepe03g1378 . 18 697 Strubbelig Receptor Gene Family AT3G13065 50.1 4.3e-110 396.0
Hepe07g1580 . 389 682 Strubbelig Receptor Gene Family AT1G11130 53.7 2.1e-85 313.9
Hepe02g0159 . 34 783 Strubbelig Receptor Gene Family AT4G03390 61.7 3.8e-208 721.8
Hepe04g1828 . 29 752 Strubbelig Receptor Gene Family AT4G03390 55.1 8.7e-160 561.2
Hepe03g1378 . 18 697 Strubbelig Receptor Gene Family AT3G13065 50.1 4.3e-110 396.0
Hepe02g2146 . 22 616 Strubbelig Receptor Gene Family AT1G78980 52.0 3.1e-164 575.9
Hepe02g1584 . 30 715 Strubbelig Receptor Gene Family AT1G78980 52.2 7.1e-153 538.1
Hepe03g1378 . 18 702 Strubbelig Receptor Gene Family AT1G78980 51.3 6.9e-132 468.4
Hepe02g1584 . 11 715 Strubbelig Receptor Gene Family AT1G53730 60.9 7.4e-214 740.7
Hepe03g1378 . 12 710 Strubbelig Receptor Gene Family AT1G53730 61.4 1.8e-191 666.4
Hepe02g1584 . 13 710 Strubbelig Receptor Gene Family AT3G14350 51.5 1.2e-184 643.7
Hepe03g1378 . 21 714 Strubbelig Receptor Gene Family AT3G14350 53.3 8.5e-167 584.3
Hepe07g1580 . 150 712 Strubbelig Receptor Gene Family AT4G22130 64.0 4.8e-176 614.8
Hepe02g1584 . 394 722 Strubbelig Receptor Gene Family AT4G22130 62.8 1.1e-119 427.6
Hepe03g1378 . 403 716 Strubbelig Receptor Gene Family AT4G22130 64.9 1.9e-116 416.8
Hepe02g0159 . 480 775 Strubbelig Receptor Gene Family AT4G22130 61.3 6.2e-107 385.2
Hepe04g1828 . 439 752 Strubbelig Receptor Gene Family AT4G22130 56.2 6.8e-98 355.1
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72955 PF00069 Pkinase 4.20E-44 CL0016 Hepe PK