Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1580 ATGGCTTTGTGGGACTTCTTTCTATTGGGGTTTTTCTTCTTCATCTTTGGTTCTTTTTCACTTGCTCGTGCTCTCACTGATGCTTCTGATGTTCAAGCTTTGCAAGTTATATACACCTCATTGAATAGTCCTCCTCAGCTGACTGGTTGGATTAGTAGTGGCGGCGATCCATGTGCAGGGTCATGGAAAGGGGTGACTTGTGATGGCTCTAAAGTTGTTTCCATTGAGATTTCTGGGTTAGGGCTGAATGGCACAATGGGTTATGCGCTCTCGAGTCTCTTGTCATTGAAAAATCTTGATATGAGCGACAACGATATTCATGACACGATTCCTTACCAATTACCGCCGAACCTCATGAGCCTAAATATGGCAAAAAACAACTTAAGTGGTAATCTTCCTTATTCCATTTCCACCATGGCTTCTCTCAATTATCTGAATATGAGCCGTAATATGCTATCTCAGGCGATAGGAGATGTTTTCACCAATATTACTACCCTGGGGACCTTGGACCTTTCTTTCAACAACTTTACTGGGGATCTTCCTAAATCCTTGAGCTCATTATCCAACGTTTCTTCCCTCTTTTTGCAGAACAACCAATTGACTGGTTCTCTCAACAATCTTATCAGTTTGCCTCTGACCACTCTAAATGTAGCAAATAATCATTTCAGTGGATGGATACCTCAAGAACTGAAGTCAATTGAAAATTTCATATCCGATGGAAATTCATTTGACAATAGTCCTGCACCTCCTCCACCAGCTTTTACTCCACCTCCTCCTGGTAGATCTCGTAACAGCCCCAAACATCCTGGGTCTGGCGGTGGCACCCATACTCCCCCAAGTTCTGATGGAAGCTCATCCCACTCGAACAAAGGCTTGCCAGTTTTGGCTATAGTGGGGATAATTTTGGGTGCTATAATTTTTGTCCTCATTGTGTTAGTTGCTTTTGCTGTATGCATCCAGAAGAGAAAACGGAAGAACATTGGTCTAAGAGCTTCCAGTGGAAGGCTGTCTATTGGCACTAGTGTGAATGCTGAGGTGCAAGAGCCTCGGGTAAAAAGCATTGCTGCTGTTGCAGACATTAAGCCTCTTCCTGCAGAGAAAATGAATCCGGAGAGATTACAAGCGAAAAATGGATCAGTGAAAAGAATAAAGTCCCCTATTACTGCTACTTCTTACACTGTTGCTTCTCTTCAAAGTGCAACAAATAGCTTTAGCCAAGAATGCATAGTTGGTGAAGGTTCTCTCGGCCGTGTTTACAAAGCTGAGTTTCAAAACGGGAAGACAATGGCAATTAAGAAAATCGACAATGCAGCATTGTCACTACAGGAAGAAGACAATTTTCTTGAAGCGGTTTCAAACATGTCAAGATTAAGGCATACAAACATTGTCACACTAAATGGTTATTGTGCAGAGCATGGTCAGCGTCTTCTAGTTTATGAGTTCATTGGAAATGGAAGTTTACATGACATGCTCCATTTTGTTGAAGATAGTTGTAAGACACTGACTTGGAATGCACGTGTCCGGGTAGCACTTGGAACCGCTAGAGCTTTAGAATACTTGCATGAGGTTTGCTTGCCTTCTGTTGTACATAGAAATTTGAAGACTGCAAACATATTACTTGATGAAGAACTCAACCCCCATTTGTCAGATTGTGGCTTGGCTGCTTTAACACCCAACACAGAGCGGCAGGTTTCTACTCAGATGGTTGGTTCCTTTGGCTATAGTGCTCCGGAATTCGCCTTGTCAGGAATATACACGGTCAAAAGTGACGTGTACAGCTTTGGGGTGGTGATGTTGGAGCTCTTGACTGGCCGAAAGCCGCTTGACAGTTCCAGGGCGAGATCAGAGCAGTCACTAGTGAGATGGGCTACTCCCCAACTTCATGATATCGACGCCTTAGCAAAAATGGTAGATCCTACTTTGAACGGAATGTACCCTGCAAAGTCTCTGTCGCGCTTTGCCGATATCATTGCTCTCTGTGTTCAGCCTGAGCCCGAGTTTCGACCTCCGATGTCTGAAGTAGTACAAGCATTGGTGCGTTTAGTGCAAAGAGCCAGTGTGGTAAAAAGGCATTCGAGCGACGAGTCGGGTTTCTCTTACAAAACGCCCGACCACGATGCAGTTGAGTTGCCATTTTGA 2139 43.99 MALWDFFLLGFFFFIFGSFSLARALTDASDVQALQVIYTSLNSPPQLTGWISSGGDPCAGSWKGVTCDGSKVVSIEISGLGLNGTMGYALSSLLSLKNLDMSDNDIHDTIPYQLPPNLMSLNMAKNNLSGNLPYSISTMASLNYLNMSRNMLSQAIGDVFTNITTLGTLDLSFNNFTGDLPKSLSSLSNVSSLFLQNNQLTGSLNNLISLPLTTLNVANNHFSGWIPQELKSIENFISDGNSFDNSPAPPPPAFTPPPPGRSRNSPKHPGSGGGTHTPPSSDGSSSHSNKGLPVLAIVGIILGAIIFVLIVLVAFAVCIQKRKRKNIGLRASSGRLSIGTSVNAEVQEPRVKSIAAVADIKPLPAEKMNPERLQAKNGSVKRIKSPITATSYTVASLQSATNSFSQECIVGEGSLGRVYKAEFQNGKTMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHTNIVTLNGYCAEHGQRLLVYEFIGNGSLHDMLHFVEDSCKTLTWNARVRVALGTARALEYLHEVCLPSVVHRNLKTANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHSSDESGFSYKTPDHDAVELPF 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 54699284 54705279 - Hsped.07g15800.1 Hepe07g1580 574975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1580 712 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 482 692 - -
Hepe07g1580 712 MobiDBLite consensus disorder prediction 268 288 - -
Hepe07g1580 712 ProSiteProfiles Protein kinase domain profile. 404 681 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1580 712 Pfam Protein kinase domain 407 676 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1580 712 SUPERFAMILY Protein kinase-like (PK-like) 384 678 IPR011009 -
Hepe07g1580 712 CDD STKc_IRAK 410 681 - -
Hepe07g1580 712 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 369 481 - -
Hepe07g1580 712 MobiDBLite consensus disorder prediction 241 288 - -
Hepe07g1580 712 Gene3D Transferase(Phosphotransferase) domain 1 482 705 - -
Hepe07g1580 712 MobiDBLite consensus disorder prediction 245 264 - -
Hepe07g1580 712 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 207 683 IPR046959 -
Hepe07g1580 712 Gene3D Phosphorylase Kinase; domain 1 365 481 - -
Hepe07g1580 712 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 27 254 - -
Hepe07g1580 712 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Hepe07g1580 712 Pfam Leucine Rich Repeat 212 232 IPR001611 GO:0005515(InterPro)
Hepe07g1580 712 Pfam Leucine Rich Repeat 166 187 IPR001611 GO:0005515(InterPro)
Hepe07g1580 712 Pfam Leucine Rich Repeat 117 138 IPR001611 GO:0005515(InterPro)
Hepe07g1580 712 SUPERFAMILY L domain-like 26 233 - -
Hepe07g1580 712 Gene3D Ribonuclease Inhibitor 26 255 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1584 Hepe-Chr2:21031314 Hepe07g1580 Hepe-Chr7:54699284 6.96e-183 dispersed
Hepe03g1378 Hepe-Chr3:70423070 Hepe07g1580 Hepe-Chr7:54699284 1.99e-145 dispersed
Hepe04g1828 Hepe-Chr4:73243272 Hepe07g1580 Hepe-Chr7:54699284 9.05e-106 dispersed
Hepe05g0548 Hepe-Chr5:7566881 Hepe07g1580 Hepe-Chr7:54699284 6.51e-122 dispersed
Hepe05g0549 Hepe-Chr5:7576090 Hepe07g1580 Hepe-Chr7:54699284 3.79e-41 dispersed
Hepe07g1580 Hepe-Chr7:54699284 Hepe01g2343 Hepe-Chr1:87975029 2.20e-82 dispersed
Hepe04g0052 Hepe-Chr4:21615158 Hepe07g1580 Hepe-Chr7:54699284 7.87e-17 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72955 PF00069 Pkinase 4.20E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1580 - - - 0.0