Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1622 ATGGATTTTCAGCTTGGTTTTGCACCGGGGTACTTGTGCCCTATTATTGTTTACTCCACCATTCCGTGGAGGGTTAAGTCGCCAGCAGCAACGAGGTGCCGCTCGCAGCTCTCAGCCTTGCCACTCGCCGCCGTCTCTGGCAAGTCTCCGTCGCCCTCCGCCTCGCCGTCGTCGCTCTCAGTCTCCGTCGCCCGCCGCTCTCAGCCGCCGCTCGTTCTGCCAAAGATTTCGCCTAACCGTCGCTCGACGGCGAAGCACACAAGAGCTTTGTTCAAGGCCCTCGCAGTCGCCGCTCGCCGCCGTCGATCTCCACCTCGCCGCTCTCCGCCTTTGAGAGAAACCAAAGTCACCCTCCGGCCACCAGAAGGAGCGAAGGAATTCATCCAGTTGACATTAATGGCCGCCAAAGATGCAGAGCAAGTCTTGGACGTGCAGTCGGTTGTCGAAGCAGTAGTTGCAGCCGGAGACGCCGATGTTCCTAGCTTCGAAGTAGAAAGCCTCTGCATGCGCTGTGGCGAAAACGGGACAACAAGATTTTTGTTAACTTCAATTCCGAACTTCAGAAAGATCTTGTTGTCGGCCTTTGAATGTCCACATTGTAATGAGAGGAACAATGAAGTCCAGTTTGCTGGTGAGATCCAGCCACGAGGCAGTTGCTACTCTTTGGAGGTTTCTGCTGGCGACAAGAAGATGCTCAATCGACAAGTGGTGAAATCTGAATCTGCCATTATTAAGATCCCTGAATTGGATTTCGAGATTCCAGCAGAGGCTCAACGTGGAACTCTATCAACAGTGGAAGGTATATTGGTACGAGCCGTGGATGGATTGGAAGCCCTTCAAGAGGAACGTAGGAAGGTGGATCCTCAGACTGCTGAAGCAATAGACCAGTTTCTCTTGAAACTGAAAGCTTGTGCCATAGGAGATTCATCTTTCTCCTTCATCTTGGATGATCCAGCTGGAAACAGCTTCATTGAGAACCCATTTGCACCATCCAAAGATCCATCATTAAGTATCAAGTTTTATGAGCGGACTCCAGAACAACAAGCATCGTTGGGTTATTACGTTGAATCATCACAATCAGAAGAGGCCCAGGGTGGAGCATCAACAAATAGAGTTGATGCTTCTAATCAAGTTAGAGGAGAGGCACATGGATCTGTAGGAGCAGTGGCTGGTCATCGGGCAATAGCTCAAAGTAACAGTGCAGAGATTGCTGATGCCTTGTTTCGTTACAGTGCACCAGAAGAAGTGATGACTTTCCCAACAACATGTGGAGCTTGTGCAGCTATGTGTGAGACTCGAATGTTCGTAACTAAAATTCCCTACTTCCAAGAAGTGATTGTCATGGCATCTACTTGTGATGCTTGTGGTTACCGTAATTCTGAGGTGAAGCCTGGTGGGCGAATCCCTGAAAAAGGAAAGATAATTAGTATTTGTGTGAAGAATGTTAGAGATCTCAGTCGAGATGTGATTAAGTCAGATACTGCAAGTGTAAAAGTCCCAGATCTTGACTTGGAGCTGACTAGTGGCACTCTTGGGGGAATTGTTACAACTATTGAAGGTTTAATCACAAAAATAAGTGAAAATCTAGAGAGAGTACATGGATTTACTTTTGGAGACAGTCTTGATGAAAATAGAAGAAACAAATGGCTGGACTTCAAAACAAGACTAACCAAGCTCTTGAGTTTGGAAGAGCCTTGGACTCTAATCCTTGATGATGCATTAGCAAACTCGTTTATTGCACCAGTGACTGATGATATAAAAGATGACCATCAGTTAACATATGAGGAGTACGAGCGGTCCTGGGAACAGAATGAGGAACTCGGTTTGAACGACATGGACACCTCGGCTGCGGATGGTGCTTATAAGTAA 1869 47.57 MDFQLGFAPGYLCPIIVYSTIPWRVKSPAATRCRSQLSALPLAAVSGKSPSPSASPSSLSVSVARRSQPPLVLPKISPNRRSTAKHTRALFKALAVAARRRRSPPRRSPPLRETKVTLRPPEGAKEFIQLTLMAAKDAEQVLDVQSVVEAVVAAGDADVPSFEVESLCMRCGENGTTRFLLTSIPNFRKILLSAFECPHCNERNNEVQFAGEIQPRGSCYSLEVSAGDKKMLNRQVVKSESAIIKIPELDFEIPAEAQRGTLSTVEGILVRAVDGLEALQEERRKVDPQTAEAIDQFLLKLKACAIGDSSFSFILDDPAGNSFIENPFAPSKDPSLSIKFYERTPEQQASLGYYVESSQSEEAQGGASTNRVDASNQVRGEAHGSVGAVAGHRAIAQSNSAEIADALFRYSAPEEVMTFPTTCGACAAMCETRMFVTKIPYFQEVIVMASTCDACGYRNSEVKPGGRIPEKGKIISICVKNVRDLSRDVIKSDTASVKVPDLDLELTSGTLGGIVTTIEGLITKISENLERVHGFTFGDSLDENRRNKWLDFKTRLTKLLSLEEPWTLILDDALANSFIAPVTDDIKDDHQLTYEEYERSWEQNEELGLNDMDTSAADGAYK 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 56756159 56776749 - Hsped.07g16220.1 Hepe07g1622 575017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1622 622 Pfam ZPR1 jelly-roll domain 484 609 - -
Hepe07g1622 622 Pfam ZPR1 jelly-roll domain 231 353 - -
Hepe07g1622 622 PANTHER ZINC FINGER PROTEIN ZPR1 138 618 IPR040141 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Hepe07g1622 622 Gene3D ZPR1, A/B domain 212 353 IPR042451 -
Hepe07g1622 622 Gene3D ZPR1, A/B domain 467 609 IPR042451 -
Hepe07g1622 622 FunFam Zinc finger protein ZPR1 156 211 - -
Hepe07g1622 622 FunFam zinc finger protein ZPR1 212 353 - -
Hepe07g1622 622 SMART zpr1 166 326 IPR004457 GO:0008270(InterPro)
Hepe07g1622 622 SMART zpr1 421 581 IPR004457 GO:0008270(InterPro)
Hepe07g1622 622 FunFam Zinc finger protein ZPR1 467 609 - -
Hepe07g1622 622 Pfam ZPR1 zinc-finger domain 415 470 IPR004457 GO:0008270(InterPro)
Hepe07g1622 622 Pfam ZPR1 zinc-finger domain 163 215 IPR004457 GO:0008270(InterPro)
Hepe07g1622 622 Gene3D ZPR1, zinc finger domain 411 466 IPR042452 -
Hepe07g1622 622 Gene3D ZPR1, zinc finger domain 158 211 IPR042452 -
Hepe07g1622 622 NCBIfam ZPR1 zinc finger domain 168 351 IPR004457 GO:0008270(InterPro)
Hepe07g1622 622 NCBIfam ZPR1 zinc finger domain 422 613 IPR004457 GO:0008270(InterPro)
Hepe07g1622 622 FunFam Zinc finger protein ZPR1 412 466 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1622 K06874 - csv:101208000 883.634