Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1643 ATGGCGTTCGTTTCTACTGCTGGTATCATCGGCCGGAGTGGTTCTTCGTCTTCCTCGTCGTGGACTCGCCAGAGGAAGGATTGTTTCAGTTCGAGGAATCGCGTTAGGGTTTCTTGTTCTTCTTATTCCTCTTCTTCTACGGTCGATCCTTACCAGACTCTCCGGATTCAACCTGGTGCATCTGAATCTGAGGTCAAAAAGGCCTTCCGAAACCTCGCTCTTCAGTATCATCCAGACGTTTGCAGAGGAACCAACTGCGGCGTGCAATTTCATCAAATCAATGAAGCTTACGATAATCATAGATCAAGAGGAGACTGGGAAAGTACCCTACACAATAACCGACGGACACGTGGCGAAAGAAGAGAGGACGGGATGAAGGAGAATAATGAAAAAAAACAGCAAGGGGGAGCAGCGCCATGCGCAGCATGCAAGCTATTGAGAAGAAGATGTGCAGAAGAGTGTGTATTTGCGCCATATTTTCCGGCAGACCAACCCCGCAAATTCGCCAATGTTCATAAAGTCTTCGGCGCTAGCAATGTCAACAAAATGCTTCAGGAGTTGCCCGTTGACCAACGAGGAGATGCAGTGAGCAGTTTGGTATATGAAGCAAACGCTCGGGTGCGTGACCCGGTCTACGGGTGCGTCGGAGCCATATCGTCTCTGCAACAGCAGATAGACGCCCTCCAAACTCAGTTGGCTCTGGCTCAAGCCGAGGTGGTGCACCTGCGGGTTCGTCAGACAACATCGTTTTCAAACTATGGGCTAAGCCCAACAAGCCCAAGTAACAGTGGGTCGCCCTCATCCAGGCTCATGGGCTCACAATCCAGGCCCATGTTTGAGATGGATATGGTTGTGGACCAAGCCATGGGGGACTCCATGTGGTGA 885 50.85 MAFVSTAGIIGRSGSSSSSSWTRQRKDCFSSRNRVRVSCSSYSSSSTVDPYQTLRIQPGASESEVKKAFRNLALQYHPDVCRGTNCGVQFHQINEAYDNHRSRGDWESTLHNNRRTRGERREDGMKENNEKKQQGGAAPCAACKLLRRRCAEECVFAPYFPADQPRKFANVHKVFGASNVNKMLQELPVDQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTTSFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 57647791 57657531 - Hsped.07g16430.1 Hepe07g1643 575038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1643 294 ProSiteProfiles dnaJ domain profile. 49 124 IPR001623 -
Hepe07g1643 294 MobiDBLite consensus disorder prediction 251 274 - -
Hepe07g1643 294 CDD DnaJ 49 98 IPR001623 -
Hepe07g1643 294 Pfam DnaJ domain 49 98 IPR001623 -
Hepe07g1643 294 MobiDBLite consensus disorder prediction 104 130 - -
Hepe07g1643 294 ProSiteProfiles LOB domain profile. 138 239 IPR004883 -
Hepe07g1643 294 Pfam Lateral organ boundaries (LOB) domain 139 236 IPR004883 -
Hepe07g1643 294 Coils Coil 218 245 - -
Hepe07g1643 294 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 138 249 - -
Hepe07g1643 294 MobiDBLite consensus disorder prediction 251 276 - -
Hepe07g1643 294 PRINTS DnaJ domain signature 69 84 IPR001623 -
Hepe07g1643 294 PRINTS DnaJ domain signature 85 105 IPR001623 -
Hepe07g1643 294 PRINTS DnaJ domain signature 51 69 IPR001623 -
Hepe07g1643 294 MobiDBLite consensus disorder prediction 9 23 - -
Hepe07g1643 294 SMART dnaj_3 48 115 IPR001623 -
Hepe07g1643 294 MobiDBLite consensus disorder prediction 1 23 - -
Hepe07g1643 294 SUPERFAMILY Chaperone J-domain 43 98 IPR036869 -
Hepe07g1643 294 Gene3D DnaJ domain 21 103 IPR036869 -
Hepe07g1643 294 MobiDBLite consensus disorder prediction 104 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0029 Hepe-Chr2:441251 Hepe07g1643 Hepe-Chr7:57647791 2.81e-34 dispersed
Hepe02g1288 Hepe-Chr2:16141372 Hepe07g1643 Hepe-Chr7:57647791 1.79e-51 dispersed
Hepe07g1643 Hepe-Chr7:57647791 Hepe08g0630 Hepe-Chr8:5603072 3.52e-68 dispersed
Hepe07g1643 Hepe-Chr7:57647791 HepeContig66g0098 Hepe-ChrContig66:6830429 1.98e-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55982 PF03195 LOB 4.70E-43 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1643 - - - 0.0