Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1659 ATGGACAATAATAATAATTATCAGCAAGCCGGTGATTTGACTGATGTAATTCGAGCCACTTCCGCCGCCACCGCCGGTGCTCTCTCCTCGGAGTTCTCTCTCAACCTCGACCCTTCTTCCGGCGACCGGCGCCTCTGGCCTCACCTTCCCCTCGATGAATCTTCCATGAGTTTTGGAGATCCATTATTGTTTCCGACTGGTACTGCTCGAGATCCGTTTCTTCATCCCAATTTTTCTGCCTTCAATTTTGCTTCTGACGGCGGCGGTGGTGGCGGCGGAGGGGGGTTGGCGGCGGTGGACCGCCCATGTAATATATTTTCTCGGATGTTGCAGATCTCTCCGAGTTCGAAACTGGGTGATGGTGTAATTAGTAGTACTCCTCCATGTGAGTCCCCGTTGGCGGTGAGGAGTTCTTCGAGCTCGACTTCCGCTAAAGCTTCTGCTTGCGGCGGCGGCGAAGTGGTTCCGAGCGGTGGCTCGAACCCACTTTACTTAATGGATAATTCCGGGATGCAGATCTCTTCCCCGCGAAATCCTGCCATTAAAAGAAGGAAGAGCCAAGTGAAGAAGGTGGTGTGCATTCCGGCGCCGGCGCCGGCGAACAGCCGATCAAGCACCGGCGAAGTGGTTCCTTCTGATCTATGGGCATGGAGGAAGTACGGACAAAAACCCATCAAAGGATCTCCATATCCAAGGGGATATTACAGGTGCAGCAGCTCCAAGGGCTGCTCTGCCCGAAAGCAGGTCGAGCGCAGCCGCACCGACCCCAACATGCTCGTCATCACCTACACCTCGGAGCACAACCACCCATGGCCCACTCAACGCAACGCCCTCGCAGGCTCAACACGTTCCCACTCTTCCCGAACCACCACCGCCACCGCCACCGCCACAACCCGTAAAACAAGCCCGAAACGTGACGACGGGAACCTGGAGACCGCAGGCATAAAGGAGGAAGAGATGGATGAAGACCAGGCAACAGAGAAAACAACAACAAACGATCATCAGGAGGAGGGAGATCATCATCAGGAGTTCCCCTACGACTTAATTTTTTCTGAATTTGCCGATCAAATAAACGACCACGACCACGATCATCATCATCATCATCATTCAGCGGACCCTCTGAACAACGACATGCTGCTGTTCAGTAGCCATGGCTTTAGTACAGGAAATGATGAAGAGGGCAGTAAAGATCCATTTTTGGAGCTCTATGATTGGGCTGAGAATTCAAATGGGAGCTTGTTCAAAGAAGCCAAGGGAGGTTGA 1263 53.05 MDNNNNYQQAGDLTDVIRATSAATAGALSSEFSLNLDPSSGDRRLWPHLPLDESSMSFGDPLLFPTGTARDPFLHPNFSAFNFASDGGGGGGGGGLAAVDRPCNIFSRMLQISPSSKLGDGVISSTPPCESPLAVRSSSSSTSAKASACGGGEVVPSGGSNPLYLMDNSGMQISSPRNPAIKRRKSQVKKVVCIPAPAPANSRSSTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSHSSRTTTATATATTRKTSPKRDDGNLETAGIKEEEMDEDQATEKTTTNDHQEEGDHHQEFPYDLIFSEFADQINDHDHDHHHHHHSADPLNNDMLLFSSHGFSTGNDEEGSKDPFLELYDWAENSNGSLFKEAKGG 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 57982642 57986399 + Hsped.07g16590.1 Hepe07g1659 575054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1659 420 SMART WRKY_cls 211 271 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g1659 420 Pfam WRKY DNA -binding domain 213 270 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g1659 420 MobiDBLite consensus disorder prediction 263 339 - -
Hepe07g1659 420 MobiDBLite consensus disorder prediction 300 339 - -
Hepe07g1659 420 FunFam probable WRKY transcription factor 14 184 265 - -
Hepe07g1659 420 SUPERFAMILY WRKY DNA-binding domain 209 272 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g1659 420 Gene3D WRKY domain 184 265 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g1659 420 MobiDBLite consensus disorder prediction 263 299 - -
Hepe07g1659 420 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 84 369 IPR044810 GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe07g1659 420 ProSiteProfiles WRKY domain profile. 206 272 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g2070 Hepe-Chr4:75521484 Hepe07g1659 Hepe-Chr7:57982642 4.27e-66 dispersed
Hepe05g1977 Hepe-Chr5:70248354 Hepe07g1659 Hepe-Chr7:57982642 1.18e-13 dispersed
Hepe07g0767 Hepe-Chr7:9275384 Hepe07g1659 Hepe-Chr7:57982642 6.49e-36 dispersed
Hepe07g1659 Hepe-Chr7:57982642 Hepe07g1840 Hepe-Chr7:61214847 1.12e-32 dispersed
Hepe07g1659 Hepe-Chr7:57982642 Hepe06g0728 Hepe-Chr6:53314997 2.92e-34 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55984 PF03106 WRKY 2.20E-25 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1659 - - - 0.0