Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1714 ATGGTTGAATTTATGGGATTACTGAAAGTCAAGGTGATTAAAGGCACAAACTTAGCCGTGAGAGATGTGAAATCCAGTGATCCTTTCATTGTCTTGACTCTTGGGCAACAGACTGCTAAAACAACGATGATAAAGTGCAACTTGAATCCAGTTTGGAACGAGGAACTCATGCTGTCGGTTCCTCAGGAATATGGACCCTTGAAGTTGCAAGTGTTCGATCACGACGTTATTACGACTAATGACAGAATGGGTGAAGCAGAAATCGACCTCCAGCCGATGATAACATCAGCAATGGCATTTGGAGATGCTGAAATGCTTCGGAATATGCAGATAGGAAAATGGTTGAAGTCAGATGACAACGCCCTCATCGATGACAGTGCCGTCATCGTCGTCGACGGGAAGGTGAAACAAGAAGTGTCGCTCAAGCTCCAAAATGTAGAATCAGGTGAAGTGTATTTGGAACTAGAGTGGATTCCTCTTGATCAGTAG 489 43.97 MVEFMGLLKVKVIKGTNLAVRDVKSSDPFIVLTLGQQTAKTTMIKCNLNPVWNEELMLSVPQEYGPLKLQVFDHDVITTNDRMGEAEIDLQPMITSAMAFGDAEMLRNMQIGKWLKSDDNALIDDSAVIVVDGKVKQEVSLKLQNVESGEVYLELEWIPLDQ 162
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 58986660 58987600 - Hsped.07g17140.1 Hepe07g1714 575109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1714 162 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 4 162 - -
Hepe07g1714 162 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Hepe07g1714 162 CDD C2_ArfGAP 6 149 - -
Hepe07g1714 162 Gene3D C2 domain 4 162 IPR035892 -
Hepe07g1714 162 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 160 IPR035892 -
Hepe07g1714 162 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 1 162 IPR044518 GO:0005096(InterPro)|GO:0005543(InterPro)
Hepe07g1714 162 SMART C2_3c 7 102 IPR000008 -
Hepe07g1714 162 Pfam C2 domain 6 93 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2498 Hepe-Chr2:71554621 Hepe07g1714 Hepe-Chr7:58986660 1.17e-59 dispersed
Hepe07g1714 Hepe-Chr7:58986660 Hepe07g2353 Hepe-Chr7:67880684 1.40e-41 dispersed
Hepe04g2050 Hepe-Chr4:75364914 Hepe07g1714 Hepe-Chr7:58986660 1.42e-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1714 K12486 - csv:101211569 292.352