Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1715 ATGAGTAATTTTGCAGTGGATTTCAGGAGGCCTGAATCAGCTAAAAGTAGATTAAAAGATTTATTGCTTCAGAAAGATAATCAACTTTGTGCAGATTGTGATGCCCCAGATCCTAAATGGGCCTCTGCAAATATTGGTGTGTTTTTATGCTTAAAATGTAGCGGCGTGCACAGAAGCCTTGGAACACACATATCAAAGGTTTTGTCAATGACATTGGATGAATGGTCTGATGATGAGGTTGATGCAATGATAGAGGTTGGAGGAAATGGTTATGCTAATTCAATATATGAGGCTTTTATCCCTGATGGATATACAAAGCCTGGACCAAGTGCCAGCCACGAGGAGCGTTTAAAGTTCATTCGGTCTAAGTATGAACTTCAAGAATTTTTAAAACCGAGCTTGCGAATTATATCCAATACCTCAAAGAGTCCCGAGGAGCCAAGTTATTTTCAAGAGATTGCTGATAGCTTTCGAAGCTCAAGTTCTTCAAAGAAATCAGTAAGTTCTATTATGTCTTCTATTTTATACCACTTGATACAATGTAATTTTTCAAACTGTTTCAAGCTTTACATAGTGATCGGTTTTGAATAA 591 37.23 MSNFAVDFRRPESAKSRLKDLLLQKDNQLCADCDAPDPKWASANIGVFLCLKCSGVHRSLGTHISKVLSMTLDEWSDDEVDAMIEVGGNGYANSIYEAFIPDGYTKPGPSASHEERLKFIRSKYELQEFLKPSLRIISNTSKSPEEPSYFQEIADSFRSSSSSKKSVSSIMSSILYHLIQCNFSNCFKLYIVIGFE 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 58987792 58989624 - Hsped.07g17150.1 Hepe07g1715 575110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1715 196 SMART arf_gap_3 15 137 IPR001164 GO:0005096(InterPro)
Hepe07g1715 196 Pfam Putative GTPase activating protein for Arf 16 131 IPR001164 GO:0005096(InterPro)
Hepe07g1715 196 FunFam Arf-GAP with dual PH domain-containing protein 1 10 138 - -
Hepe07g1715 196 SUPERFAMILY ArfGap/RecO-like zinc finger 15 132 IPR037278 -
Hepe07g1715 196 Gene3D Arf GTPase activating protein 3 136 IPR038508 -
Hepe07g1715 196 PRINTS HIV Rev interacting protein signature 67 88 IPR001164 GO:0005096(InterPro)
Hepe07g1715 196 PRINTS HIV Rev interacting protein signature 27 46 IPR001164 GO:0005096(InterPro)
Hepe07g1715 196 PRINTS HIV Rev interacting protein signature 46 63 IPR001164 GO:0005096(InterPro)
Hepe07g1715 196 ProSiteProfiles ARF GTPase-activating proteins domain profile. 15 129 IPR001164 GO:0005096(InterPro)
Hepe07g1715 196 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 7 172 IPR044518 GO:0005096(InterPro)|GO:0005543(InterPro)
Hepe07g1715 196 CDD ArfGap 18 124 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g2050 Hepe-Chr4:75364914 Hepe07g1715 Hepe-Chr7:58987792 1.99e-74 dispersed
Hepe07g1715 Hepe-Chr7:58987792 Hepe07g2326 Hepe-Chr7:67591010 3.09e-24 dispersed
Hepe01g0435 Hepe-Chr1:58165004 Hepe07g1715 Hepe-Chr7:58987792 2.68e-21 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1715 K12486 - csv:101211569 278.87