Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1716 ATGGCTGTTGCCATTCATAGAGATTCCTTGAATAAGCAGATGGATTCAAGCAAGTATGTGAGATATACGCCTGAACAAGTCGATGCATTAGAGAGGGTTTATGCTGAATGTCCAAAACCCAGTTCGTTGAGAAGGCAACAGCTCATTCGAGAGTGTCCCATTCTCTCTAATATTGAGCCTAAGCAGATCAAAGTTTGGTTCCAAAATCGCAGATGTCGTGAAAAGCAAAGGAAGGAATCTTCTCGTCTTCAAACTGTTAATAGGAAGCTGACTGCGATGAACAAGTTGTTGATGGAAGAGAATGACCGTCTGCAGAAGCAGGTCTCTCGTTTGGTTTACGACAACGGATACATGAAACAGCAGCTGCATACTGCATCTGGAACAACCACAGACAATAGCTGTGAGTCTGTGGTCATGAGTGGTCAACACCATCAACAGCAAAACCCAACTAAGCATACCCAAAAGGATGCTAATAACCCAGCTGGTCTTCTTGCGATAGCCGAGGAGACCTTGGCAGAGTTCCTTTCCAAGGCAACAGGAACTGCTGTCGACTGGGTTCAAATGATTGGGATGAAGCCTGGTCCGGATTCAATTGGGATTGTTGCTGTTTCCCGCAACTGCAATGGGGTAGCAGCACGAGCCTGTGGTTTAGTGAGTCTTGAGCCAACGAAGGTGGCCGAAATTCTCAAAGATCGTCTGTCATGGTTTCGTGACTGCCGTTGTGTTGATGTATTAAGTGTAATCTCTACAGGAAATGGGGGGACTATAGAACTCTTATATATGCAGACATATGCACCTACAACTTTGGCAGCAGCACGTGACTTTTGGACTCTTCGATACACTACAAGCTTGGAAGATGGAAGCCTAGTGATATGTGAGAGATCTTTGACGTCGTCTACTGGTGGCCCGTTGGGGCCTCCTCCATCCAGTTTCATAAGAGCTGAAATGCTTCCAAGCGGGTATCTTATTCGAGCTTGTGAGGGCGGTTCCCTTATTCACATTGTTGATCATGTTGATTTAGATCCTTGGAGTGTTCCTGAAGTTCTAAGGCCACTTTATGAATCAACAAAGATTCTAGCTCAGAGAATAACTGTTGCTGCCTTACGCTATGTTCGGCAAATTTCTCAAGAGGCGAGTGGAGAAATTCAGTTGGGTGGGGGACGCCAACCAGCTGTTTTAAGGACTTTCAGTCAAAGGCTCTGTAGGGGTTTTAATGATGCAGTAAATGGATTTGTGGATGATGGTTGGTCGCTTATGGAGAGTGATGGAGTAGACGATGTGACGGTTGTTATTAATTCATCTCCAAACAAATTCCTCGGTTCGCAATATAACACATCATTGTATCCTACTTTTGGAGGCGTGTTGTGTGCAAAGGCATCAATGTTGCTGCAGAATGTCCCCCCAGCTTTGCTTGTTCGTTTCCTGCGGGAGCATCGTTCAGAATGGGCTGATTATGGAGTTGATGCATACTCTGCTGCGTGTCTTAAATCCAGTGCATATGCTGTTCCCTGTGCGAGACCTGGGGGCTTCCCGAGTGGTCAGGTCATTTTACCACTTGCGCATACTGTTGAGAATGAGGAGTTTTTGGAGGTTGTTCGGTTAGAGGGCCATGCTATGTTCCCTGAAGAAGCTGCTTTAGGTGGACGCGATATGTACTTATTGCAGCTGTGTAGTGGGGTTGATGAAAATGCAGTTGGTGCCTGTGCTCAGCTTGTATTTGCACCTATAGACGAATCGTTTGCCGATGATGCTCCCTTGCTGCCATCTGGTTTTCGTGTCATACCATTGGAGTCCAAAACGGATGCGCCTGCTGCAACTCGAACTTTGGATTTGGCATCTACTTTAGAAGTCCGGCCTGGCACTGCCCGTCCAGGCGGTGAAAATGAGGCTACAAATTATAACCTCAGGTCAGTCTTGACTATTGCATTCCAATTCACTTTTGAGAACCACATGCGGGATAGTGTGGCTGCTATGGCGAGACAATATGTGCGAACCGTTGTGGGATCAGTTCAGAGGGTTGCCATGGCTATTGCCCCCTCGCCCCTTGGCTCCCAAATCGGTTCAAAAAGCCTTCCTGGCTCCCCGGAGGCTCTCACATTGGCCCAGTGGATCTCTCGAAGCTACAGGATCCACACTGGGGCAGAGCTCTTTCAGGTTCAATCCCAGTCTGATGATGCTGTCTTGAAACAGCTTTGGCACCATTCAGATACAATCTTGTGCTGCTCTGTCAAAACTAATGCATCTCCTGTGTTCACATTTGCAAACCAAGCTGGACTTGACATGCTCGAAACTACCCTTGTCGCTCTTCAAGATATAACGCTCGACAAGATCCTTGACGATGCTGGTCGGAAGATACTGTGCTCCGAGTTCTCCAAGATAATGCAACAGGGATATGCATACCTTCCAGCAGGAATATGCGTCTCGAGTATGGGCAGGCCGGTGTCGTATGAACAAGCAATTGCATGGAAAGTTCTGAATGATGATGATGTTCATCACTGTCTGGCTTTCATGTTCGTTAACTGGTCCTTTATGTGA 2535 46.94 MAVAIHRDSLNKQMDSSKYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYDNGYMKQQLHTASGTTTDNSCESVVMSGQHHQQQNPTKHTQKDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCNGVAARACGLVSLEPTKVAEILKDRLSWFRDCRCVDVLSVISTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPLGPPPSSFIRAEMLPSGYLIRACEGGSLIHIVDHVDLDPWSVPEVLRPLYESTKILAQRITVAALRYVRQISQEASGEIQLGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMESDGVDDVTVVINSSPNKFLGSQYNTSLYPTFGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKSSAYAVPCARPGGFPSGQVILPLAHTVENEEFLEVVRLEGHAMFPEEAALGGRDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFRVIPLESKTDAPAATRTLDLASTLEVRPGTARPGGENEATNYNLRSVLTIAFQFTFENHMRDSVAAMARQYVRTVVGSVQRVAMAIAPSPLGSQIGSKSLPGSPEALTLAQWISRSYRIHTGAELFQVQSQSDDAVLKQLWHHSDTILCCSVKTNASPVFTFANQAGLDMLETTLVALQDITLDKILDDAGRKILCSEFSKIMQQGYAYLPAGICVSSMGRPVSYEQAIAWKVLNDDDVHHCLAFMFVNWSFM 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 59032528 59040524 + Hsped.07g17160.1 Hepe07g1716 575111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1716 844 SMART HOX_1 15 81 IPR001356 GO:0003677(InterPro)
Hepe07g1716 844 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 12 844 IPR044830 GO:0003700(InterPro)
Hepe07g1716 844 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677(InterPro)
Hepe07g1716 844 Gene3D - 185 367 IPR023393 -
Hepe07g1716 844 Coils Coil 87 107 - -
Hepe07g1716 844 SUPERFAMILY Bet v1-like 166 373 - -
Hepe07g1716 844 Pfam START domain 166 373 IPR002913 GO:0008289(InterPro)
Hepe07g1716 844 SUPERFAMILY Homeodomain-like 18 79 IPR009057 -
Hepe07g1716 844 FunFam Homeobox-leucine zipper protein REVOLUTA 18 73 - -
Hepe07g1716 844 CDD START_ArGLABRA2_like 160 374 - -
Hepe07g1716 844 Gene3D - 10 84 - -
Hepe07g1716 844 ProSiteProfiles START domain profile. 156 383 IPR002913 GO:0008289(InterPro)
Hepe07g1716 844 CDD bZIP 70 109 - -
Hepe07g1716 844 MobiDBLite consensus disorder prediction 137 157 - -
Hepe07g1716 844 SMART START_1 165 374 IPR002913 GO:0008289(InterPro)
Hepe07g1716 844 CDD homeodomain 18 78 IPR001356 GO:0003677(InterPro)
Hepe07g1716 844 Pfam MEKHLA domain 699 843 IPR013978 -
Hepe07g1716 844 Pfam Homeodomain 18 76 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1517 Hepe-Chr3:72054457 Hepe07g1716 Hepe-Chr7:59032528 0.0 dispersed
Hepe07g1716 Hepe-Chr7:59032528 Hepe08g0890 Hepe-Chr8:8076955 0.0 dispersed
Hepe04g2047 Hepe-Chr4:75327603 Hepe07g1716 Hepe-Chr7:59032528 0.0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55988 PF01852 START 6.10E-51 CL0209 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1716 K09338 - csv:101211318 1595.87