Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1785 ATGGCGGCCTCAACAATGGCTCTGTCGTCTTCTTCACTCGCCGGAAAGGCAGTCAAACTCACTCCCTCCTCCCCGGAGCTTTTCGGCAACGGCAGAGTCAGCATGAGGAAGTCTGCCTCCAAATCTGTTTCTTCTGGTAGCCCATGGTACGGACCCGACCGTGTTAAGTATTTGGGACCATTTTCCGGCGAGTCTCCGTCCTACCTCACTGGAGAATTCCCCGGCGACTACGGCTGGGATACTGCCGGACTTTCTGCAGACCCCGAGACCTTCGCCAAGAACCGGGAGCTCGAAGTCATCCACTCCAGATGGGCTATGCTCGGAGCCTTGGGTTGCGTCTTTCCTGAGCTTCTGTCCCGCAATGGCGTGAAATTCGGTGAAGCAGTCTGGTTCAAGGCGGGTTCTCAGATCTTTAGTGAAGGTGGGCTCGACTACTTGGGGAACCCAAGCTTGGTTCACGCACAAAGCATTCTCGCCATTTGGGCCACACAGGTGGTTCTCATGGGGGCCGTCGAGGGATACCGTATTGCCGGTGGCCCACTTGGCGAGGTGATCGACCCAATCTACCCGGGTGGGAGCTTCGACCCGTTGGGGCTTGCAGATGACCCAGAAGCTTTTGCAGAGTTGAAAGTGAAGGAGCTGAAGAATGGGAGATTGGCCATGTTCTCCATGTTTGGTTTCTTCGTCCAAGCCATCGTCACCGGAAAGGGTCCACTAGAGAATCTAGCCGACCACCTTGCTGACCCAGTCAACAATAATGCGTGGGCTTTTGCTACCAACTTTGCTCCTGGAAAATGA 798 55.26 MAASTMALSSSSLAGKAVKLTPSSPELFGNGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVIDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFAPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 60430990 60432369 - Hsped.07g17850.1 Hepe07g1785 575180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1785 265 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Hepe07g1785 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Hepe07g1785 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
Hepe07g1785 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Hepe07g1785 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 265 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0532 Hepe-Chr3:9768512 Hepe07g1785 Hepe-Chr7:60430990 9.38e-190 dispersed
Hepe03g0533 Hepe-Chr3:9858236 Hepe07g1785 Hepe-Chr7:60430990 9.38e-190 dispersed
Hepe03g0534 Hepe-Chr3:9932796 Hepe07g1785 Hepe-Chr7:60430990 2.11e-63 dispersed
Hepe06g0214 Hepe-Chr6:7695887 Hepe07g1785 Hepe-Chr7:60430990 1.35e-69 dispersed
Hepe07g1095 Hepe-Chr7:18324693 Hepe07g1785 Hepe-Chr7:60430990 1.16e-120 dispersed
Hepe07g1785 Hepe-Chr7:60430990 Hepe09g1201 Hepe-Chr9:14807166 1.61e-36 dispersed
Hepe07g1783 Hepe-Chr7:60407578 Hepe07g1785 Hepe-Chr7:60430990 2.58e-187 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1785 K08912 - csv:101211276 496.123