Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1794 ATGCCATGTTCTTCGTGTACGAAGCACTTCTTCAAGCGCTTTTTCACGGATGAGTTTCAAATGAATGGCGCTCTTCAAAGCACTTTCTTGTCTCCTCATCTCTTGCCATCCCTTGGAGCTACCATCAACCACACCACCAAGCTTCGTAAACACATCATTTCCCCTTTCAATCCTCGTTATCGTGCTTGGGAGATGTGGCTGGTGATTCTAGTGATTTACTCCGCTTGGATTTGTCCTTTTGAATTTGCGTTTCTTCCTTACAAGCAAAATGCTCTTTTCATAATCGACCACATCGTCAACGCCTTTTTTGCCATCGATATCGTTTTGACATTTTTCGTTGCATATCTCGATAGTCAATCCTATCTTCTCGTCGACGACCACAAACAGATTGCAGTCAGGTATTTAACTACATGGTTTATTTTCGACGTTTGTTCTACTGCGCCATTACAGCCAATCAGTTTCATATTTACGAATCAAAGTGGGGAAGTTGGGTTTAAGCTTCTCAATATGCTCCGGCTATGGCGGCTCCGACGGGTCAGCTCTCTCTTTGCAAGGCTAGAAAAGGACATCAGGTTCAATTATTTCTGGACCCGTTGCACAAAGCTCATTTCTGTTACATTATTTGCAGTACACTGTGCTGGATGCTTTAATTTCGTAATAGCAGATAAATATCCAGACTCAAAACGAACATGGATTGGCGCAGTGAACCCAAATTTCAAAGAAGACAGTGTGTGGAATCTTTATATTACTTCAATTTACTGGTCCATTACCACCTTAACAACCACTGGCTATGGCGATCTCCACGCTGAGAACCCAACTGAAATGCTGTTTGATATCTTTTACATGCTCTTCAACTTGGGTTTGACTTCTTATCTCATTGGCAACATGACGAATCTCGTCGTCCATTGGACTAGTCGCACCCGAAACTTCAGAGATTCCGTACGAGCTGCGACGGAGTTTGCGATGAGAAACCAGTTACCGGATCGCATACAAGACCAAATGTTATCGCATATATGTCTCAAGTTCAGAACCGAGGGGTTGAAGCAGCAAGACACCTTGAATGACCTTCCAAAGGCCATTAGAGCTTCCATAGCTCACTATCTCTTCTATCCTATTGTTCAAAATGCCTACCTTTTTCAAGGAGTTTCTCATAACTTTCTTTTCCAATTGGTGTCAGATGTGGAGGCTGAGTACTTCCCACCAAAGGAAGATGTTATACTCCAAAATGAGGTTCAAACAGATCTCTATATATTAGTCTCAGGCAGTGTGGATCTAATATCCAATATTGATGGGCATGAGCAAGTTATAGGAGAAGCAACTGCTGGAGATATGTTTGGAGAATTTGGAGTGTTGTGTCAAAAGCCACAACCTTTCACAATTAAAACCACAAAGCTTTCTCAAATCTTAAGGCTCAAGAGAACTTCTTTATTGTATATTATTCAATCAAATTCACAAGATGGGGATATTATAACCAATAACTTTTTCAAGAAAATGAAGGAATATGAAAGGATGGGCAATATTTGGTGTGATGGTGGGCTAAAGAGACTTGAAAATTATCATTCTAAAGATGATGATGATGTTATAGATCAACAAGATGAATTGGGAAAGCAAAGAAATGAAAATGTGGGAAGTTTAGATGAACATAGAATTGAGTTTGATGAGCTTGAAGGAGATGAGAATGACATTTTTTCTCATAACAAATTACAAGGAAGAAATAATGGAGGTGGTTCGAAATTCATAATTTCCTCATTAGAAAATTTGCCAACAACTTCTTGCTCCAACGTCTCTAGACAAATCAAGAAAAGGGTTACGATATACATGCAATCTCGAGATAAAAGCGAGGTTAAAAGCCAATATGGGAAGTTAATGCTTCTCCCTAGTTCGATAGAAGAGCTCTGCAGAATCGCAGGTGAAAAGTTTGGAGGGGAAATGCCCACAAAAGTGATGAGTGCAGATAATGCAGAAATTGATGATATAGGTGTGATTCGTGATGGTGACCATTTGTTTCTTCTTTATAATAATGATATCCAAAAATGTGGTCTCCAATGA 2049 39.78 MPCSSCTKHFFKRFFTDEFQMNGALQSTFLSPHLLPSLGATINHTTKLRKHIISPFNPRYRAWEMWLVILVIYSAWICPFEFAFLPYKQNALFIIDHIVNAFFAIDIVLTFFVAYLDSQSYLLVDDHKQIAVRYLTTWFIFDVCSTAPLQPISFIFTNQSGEVGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLISVTLFAVHCAGCFNFVIADKYPDSKRTWIGAVNPNFKEDSVWNLYITSIYWSITTLTTTGYGDLHAENPTEMLFDIFYMLFNLGLTSYLIGNMTNLVVHWTSRTRNFRDSVRAATEFAMRNQLPDRIQDQMLSHICLKFRTEGLKQQDTLNDLPKAIRASIAHYLFYPIVQNAYLFQGVSHNFLFQLVSDVEAEYFPPKEDVILQNEVQTDLYILVSGSVDLISNIDGHEQVIGEATAGDMFGEFGVLCQKPQPFTIKTTKLSQILRLKRTSLLYIIQSNSQDGDIITNNFFKKMKEYERMGNIWCDGGLKRLENYHSKDDDDVIDQQDELGKQRNENVGSLDEHRIEFDELEGDENDIFSHNKLQGRNNGGGSKFIISSLENLPTTSCSNVSRQIKKRVTIYMQSRDKSEVKSQYGKLMLLPSSIEELCRIAGEKFGGEMPTKVMSADNAEIDDIGVIRDGDHLFLLYNNDIQKCGLQ 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 60604530 60609861 - Hsped.07g17940.1 Hepe07g1794 575189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1794 682 Gene3D Jelly Rolls 345 506 IPR014710 -
Hepe07g1794 682 FunFam Potassium channel KAT2 366 502 - -
Hepe07g1794 682 Pfam Cyclic nucleotide-binding domain 397 483 IPR000595 -
Hepe07g1794 682 ProSiteProfiles cAMP/cGMP binding motif profile. 378 497 IPR000595 -
Hepe07g1794 682 SUPERFAMILY Voltage-gated potassium channels 55 301 - -
Hepe07g1794 682 PANTHER POTASSIUM CHANNEL AKT1 18 526 IPR045319 GO:0005249(InterPro)|GO:0006813(InterPro)
Hepe07g1794 682 CDD CAP_ED 378 485 IPR000595 -
Hepe07g1794 682 ProSiteProfiles KHA domain profile. 602 682 IPR021789 -
Hepe07g1794 682 SMART cnmp_10 378 495 IPR000595 -
Hepe07g1794 682 Pfam KHA, dimerisation domain of potassium ion channel 601 670 IPR021789 -
Hepe07g1794 682 Pfam Ion transport protein 60 307 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g1794 682 PRINTS EAG/ELK/ERG potassium channel family signature 73 80 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe07g1794 682 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe07g1794 682 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe07g1794 682 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe07g1794 682 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe07g1794 682 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe07g1794 682 SUPERFAMILY cAMP-binding domain-like 305 496 IPR018490 -
Hepe07g1794 682 Gene3D - 61 301 - -
Hepe07g1794 682 FunFam Potassium channel KAT3 62 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2041 Hepe-Chr1:85082695 Hepe07g1794 Hepe-Chr7:60604530 9.57e-180 dispersed
Hepe01g2061 Hepe-Chr1:85258751 Hepe07g1794 Hepe-Chr7:60604530 4.20e-167 dispersed
Hepe02g2365 Hepe-Chr2:68446417 Hepe07g1794 Hepe-Chr7:60604530 1.88e-80 dispersed
Hepe07g0504 Hepe-Chr7:5350399 Hepe07g1794 Hepe-Chr7:60604530 6.59e-162 dispersed
Hepe07g1794 Hepe-Chr7:60604530 Hepe09g0689 Hepe-Chr9:6524761 4.33e-209 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1794 K21867 - csv:101215858 1103.58