Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1814 ATGGTAGTCGAAGAGACGATCAAAGCTACAACGACGGAAGATCTTTCCAATTCCATCGCAAATCAAAACCCTAGGGGCCGAGGCGCCGAGGAAGACGAGGAGCTTGAGGAAGGAGAGATCATCGGAGACGATGACCTAGACTCTTCCAATTTATTACCGCCGATTGTGCACCATCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAATCCCTCCGCCAAGTCCAAGCAAGCCACCTGGGGTGCGTCTATCCGACCGATCTATACCTTCTCTACTGTTGAGGAGTTCTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACAAACAATTGAGCCTAAATGGGAGGATCCTGTTTGTGCAAATGGAGGGAAATGGACTGTAAACTTTCAGAGGGGTAAATCTGATCATGGCTGGCTGTACACGCTGCTCGCTATGATTGGAGAACAGTTCGACTGTGGTGATGAAATTTGTGGAGCAGTTGTTAATGTTAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTCTCAATGAAGCTGCGCAGGTGAGCATCGGGAAACAGTGGAAGGAGTTCCTTGATTACAGTGACACCATTGGCTTTATATTCCACGATGATGCAAAGAAACACGACAGACATGCGAAGAACAAATATTCGTTATGA 708 46.19 MVVEETIKATTTEDLSNSIANQNPRGRGAEEDEELEEGEIIGDDDLDSSNLLPPIVHHPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKQTIEPKWEDPVCANGGKWTVNFQRGKSDHGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNALNEAAQVSIGKQWKEFLDYSDTIGFIFHDDAKKHDRHAKNKYSL 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 60893308 60896366 + Hsped.07g18140.1 Hepe07g1814 575209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1814 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Hepe07g1814 235 MobiDBLite consensus disorder prediction 1 36 - -
Hepe07g1814 235 SUPERFAMILY eIF4e-like 56 230 IPR023398 -
Hepe07g1814 235 MobiDBLite consensus disorder prediction 9 24 - -
Hepe07g1814 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 54 235 IPR023398 -
Hepe07g1814 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 22 228 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Hepe07g1814 235 Pfam Eukaryotic initiation factor 4E 61 212 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe07g1814 235 FunFam Eukaryotic translation initiation factor 4E 53 235 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0309 Hepe-Chr3:4272612 Hepe07g1814 Hepe-Chr7:60893308 9.30e-73 dispersed
Hepe07g1814 Hepe-Chr7:60893308 Hepe05g0938 Hepe-Chr5:41181896 4.97e-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1814 K03259 - csv:101206312 424.091