Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g1822 | ATGGAAACGAATAACGGTTGCAACGGGGTGAGGTTTTTGCTGGGGAAGCAATCGTCGATGGCGCCGGAGCGGCAGGCGGAGGAGGCGGTGGAGGACGGGGAGGAAATCGATCCGGGGGTGAGATTGATGTATTCGGCGAATGAAGGCGATTTGGAAGGGATTAAGGAGCTTCTAGATTCTGGAATTGATGTTAATTTTCACGATGTTGATTATCGGACGGCGCTTCATATTGCTGCTTGTCAAGGCTGCTCGGAAATCGTCGATTTGTTGCTCCGGCGAGGCGCTGAGATTGACCCTAAAGATCGCTGGGGTAGTACGCCTCTTGCAGATGCAATATTCTACAAAAACCATGAAGTTATCAAATTGTTAGAAAAAAGTGGCGCAAAACATCTGAATGCTCCCATGCTCGTCAAACATGCTCGTGAAGTCCCAGAATATGAAATTGATCCTAAAGAATTTGACTTCACAAACAGTGTCAACTTGACCAAGGGAACCTTCCATCTAGCATCATGGCGCGGAATCCAAGTTGCAGTCAAAGAGCTTCCAGAAGATGTAATTTTAGAGAAGGACAAAGTGAATGCTTTTAGAGATGAGCTTGCGTTGCTTCAGAAGATTCGGCATCCTAATGTAGTTCAATTTCTTGGTGCTGTCACTCAAAGTAGTCCCATGATGATTGTTACTGAATTTTTGCCAAAGGGAGATCTTTGTCAACTTTTACAGAGAAAAGGAGCATTAAAACCAATTGTAGCTGTGAAATTTGCCCTTGATATTGCAAGGGGAATGAACTATTTGCACGAAAACAAACCTGCACCGATCATCCACCGCGATCTTGAGCCATCAAATATATTGCGAGATGACACTGGGAACCTGAAAGTTGCAGACTTTGGTGTTAGCAAGTTGCTCACAGTCAAGGAGGATAAGCCTCTAACTTGTCAAGACACTGCTTGCCGATATGTCGCTCCAGAAGTTTTCAAAAACAATGGATACGATACCAAAGTAGATGTTTTCTCCTTTGCTTTAATTCTACAAGAGATGATTGAAGGGCAACCGCCATTTTCAACCAAGAAAGAAAATGCCATTCTTAAAGAGTATGCATCCGGAGTACGCCCAGCCTTCCAAGCTCCAGCTAAATTATACGCCCATGGAATTAAAGAGTTGATTGAAGATTGCTGGAATGAGAAGCCATCAAAGAGACCAACTTTTAGACAGATAATCACAAGGCTGGAAACCATTCATCACAGTCTTAGCCACAGAAGGCGTTGGAAGGGTAAATCTCAGCCTCCACTTGGCCGACGAATGATCGAAGGTACAGAAATGGAGTTTCCCGAGTGCCCAGTTTGCCTGCAAACATACGACGGCGAATCCACAGTTCCTCGTGTTCTCTCTTGTGGCCACTCAGCCTGCGGAATCTGCCTCCAGAATCTCCCTCAGCGATACCCCGAAACCATTAGATGTCCCGCCTGCAACGTTCTCGTCAAATTCCCCTTTCAAGGCGCTTCAGCGCTCCCCAAAAACATCGATCTCCTCAGACTCTGCCCCCAGCTGAACGCCGATGATCAAACTTCCAAAAAACCTCTCAAACGACGACCCATCGATCAAAACTACGAGTTGTTCCCTCGGGTTTGGTCCGATGAATTCTACAAAGCTTGGAAGCAATGGATCCTGCCGCACGACGCCGTTTCGATCGACCGGAGAGATGGCGATGACGGAGTGGGAAGAATTGGTTCCGTTTCAGATTCAGGTTCTTCTTTCCCAATCAGGGTTGGAGACGACCGGACTGTAAGTCTTGTTCGAGTCGTTTCGTTGCCTTGTTCGAATAGTGATTCTGTGCTCAAGTTTAGTTATATTTCAATGGTTTTGAAATGCTTGAGTGAATTGAAGGATGGGGAGAGGAATGAACTGGGTTTGGTTTTGGGAACTGGTTTTGTGAATGGTGGAAGATTTTGTAGAACTTATGGGTTGTGGGGTAATTTGGAGGATGGGTTTCTGTACTTGGTATGTGAGAAACGAACTGAGGACGTAGTGGAGAGGATTAACAATTGGATAAAGAAACTTGATATCAGAAATAAGGTTGGTTTGAATAAAGATGAGATGTGCAGTTTCGCCATGATTGCCATTGAGTTATGTGAAGCAATCATCGGTATGCATTCTCTGAGGTTAAGTACTGGCTTTTTGAGTCTTTCATGTTTTAGTGTTGGTGAATTTGGTGGTGTTTGTGTTGATGTAAATGGGGTTTTGGTGATGGGAAGAACTGTTCGGGAGATGGTGGTGGAAGCTGTTTCTACCGGATCAAAACTCGACTCCAAGGAATTGGGAATTCTTATTAGTAATCTGATAAAGAAAGAGGTTTTTGTCAGCCCAGAAGTTTTGCTCAAATTACTGCATAAAGAAGGCATTGAGCTGGAATGTGGCACGACTCTATGTTCGGTCGGGAACAAGTGCGATATTTGGTCCTTAGTTTTTGTTTTGCTGAGTCTTCTTCTTGGAAAGGAATGCTTTGAAGAGACACTGGGGACTCTAGAAGGAATTCATTCTGATTTCTCTGCCTTTTATGGGAGTTGGATGGAGAAAGTTAATTCTTGTTTGGACATGAAGTTAGGTTTGGAGTATGCATCGTTGAGACAGGCACTCTGCAAGTCTTTAAGTTTCGTTCCTGAAAACCGTACGTGTGTTGTTGAATTGTTGAGATGCTTTAGGGAACTGATTGTTAGTTCTGAGTTGGATGCTTTGGCCAGTTTGAAACTTGCAGTTAATGAATATGGTGTTCATCATTGCTTGGTTTTGGGGGACCTCATTCAACTTCCCAACAAATTGATTGAAACTCAAAGCGATGATACGGATCAAATCGTGGAGGAGAAAACAACAAAAGATTTTGTTGATGGGCTATCAGTTGGAATGGTGAAGTCTAGAGACATGCTGAGCCATCGTGATAGTATTACTGGTTTAGTAGTTGGTGGGGATTATCTGTTTAGCTCGTCATATGATAAGACTGTCCAAGCATGGTCTTTGCAAGACTTCTCTCATGTACACACATTTATCGGTCACGAGCATCGAGTAATGGATTTGGCATATATTGCTGAAGAACAACCATTATGTGTAAGTGCTGATATTGGAGGTGGTATATTTGTCTGGAGCATTGCTCTTCCTCTCAAGCAAGATCCATTAAAGAAATGGTACGAGGAGAAGGATTGGCGCTACGATGGCATTCATGCCTTGGCCTACTCAGGAAATGGGTACCTTTATACCGGTGGAGGCGATAAATCTATTAAAGCGTGGTCATTAAAGGATGGCACCTTATCAAGCACTATGCACGGTCATAAATCGGTAGTTTCCGCTCTTGTAGCAAGTAATGGCATTCTTTATAGTGGCAGTTGGGATGGAACCGTTCGATTATGGAGTCTTGCCGATCATAGTCAGTTGACCGTACTCGGGGAAGAATCATCTGGAAGTTTGGGTTCTATCCTATGTCTGGCTGCTAACATGGACATGCTTGTTGCAAGTCATGAAAAAGGATCCATAAAGGTTTGGAGGAATGATGTATTTATGAAAACCTTGAAGTTGCATGATGGTGCCATTTTTGCCACCAGCATGCAGGGGAAGCAACTCATCACGGGGGGTCGAGATAAAGCCGTAAATGTACAGGAGTTATCAGGCGACGAGTTCGAGATTGATTGTAGACATCTTGGATCTATCCCTTCAAATTCTACAGTAACAGCATTATTGTGTTGGCAAAGCAAACTTTATGTTGGATATGCAGATAGGTATATTAAGACCCCGAAGCTACAACGACGTTCATTTTTTCGTCTTAAAGACGAAAAATTGAACAATTGA | 3831 | 43.7 | METNNGCNGVRFLLGKQSSMAPERQAEEAVEDGEEIDPGVRLMYSANEGDLEGIKELLDSGIDVNFHDVDYRTALHIAACQGCSEIVDLLLRRGAEIDPKDRWGSTPLADAIFYKNHEVIKLLEKSGAKHLNAPMLVKHAREVPEYEIDPKEFDFTNSVNLTKGTFHLASWRGIQVAVKELPEDVILEKDKVNAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEFLPKGDLCQLLQRKGALKPIVAVKFALDIARGMNYLHENKPAPIIHRDLEPSNILRDDTGNLKVADFGVSKLLTVKEDKPLTCQDTACRYVAPEVFKNNGYDTKVDVFSFALILQEMIEGQPPFSTKKENAILKEYASGVRPAFQAPAKLYAHGIKELIEDCWNEKPSKRPTFRQIITRLETIHHSLSHRRRWKGKSQPPLGRRMIEGTEMEFPECPVCLQTYDGESTVPRVLSCGHSACGICLQNLPQRYPETIRCPACNVLVKFPFQGASALPKNIDLLRLCPQLNADDQTSKKPLKRRPIDQNYELFPRVWSDEFYKAWKQWILPHDAVSIDRRDGDDGVGRIGSVSDSGSSFPIRVGDDRTVSLVRVVSLPCSNSDSVLKFSYISMVLKCLSELKDGERNELGLVLGTGFVNGGRFCRTYGLWGNLEDGFLYLVCEKRTEDVVERINNWIKKLDIRNKVGLNKDEMCSFAMIAIELCEAIIGMHSLRLSTGFLSLSCFSVGEFGGVCVDVNGVLVMGRTVREMVVEAVSTGSKLDSKELGILISNLIKKEVFVSPEVLLKLLHKEGIELECGTTLCSVGNKCDIWSLVFVLLSLLLGKECFEETLGTLEGIHSDFSAFYGSWMEKVNSCLDMKLGLEYASLRQALCKSLSFVPENRTCVVELLRCFRELIVSSELDALASLKLAVNEYGVHHCLVLGDLIQLPNKLIETQSDDTDQIVEEKTTKDFVDGLSVGMVKSRDMLSHRDSITGLVVGGDYLFSSSYDKTVQAWSLQDFSHVHTFIGHEHRVMDLAYIAEEQPLCVSADIGGGIFVWSIALPLKQDPLKKWYEEKDWRYDGIHALAYSGNGYLYTGGGDKSIKAWSLKDGTLSSTMHGHKSVVSALVASNGILYSGSWDGTVRLWSLADHSQLTVLGEESSGSLGSILCLAANMDMLVASHEKGSIKVWRNDVFMKTLKLHDGAIFATSMQGKQLITGGRDKAVNVQELSGDEFEIDCRHLGSIPSNSTVTALLCWQSKLYVGYADRYIKTPKLQRRSFFRLKDEKLNN | 1276 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 60994318 | 61004805 | - | Hsped.07g18220.1 | Hepe07g1822 | 575217 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g1822 | 1276 | ProSiteProfiles | Ankyrin repeat region circular profile. | 70 | 102 | - | - | |
Hepe07g1822 | 1276 | Gene3D | - | 937 | 1049 | IPR015943 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | Gene3D | - | 15 | 142 | IPR036770 | - | |
Hepe07g1822 | 1276 | ProSiteProfiles | Protein kinase domain profile. | 120 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g1822 | 1276 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 435 | 524 | IPR013083 | - | |
Hepe07g1822 | 1276 | FunFam | Integrin-linked protein kinase family | 22 | 146 | - | - | |
Hepe07g1822 | 1276 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 1103 | 1134 | - | - | |
Hepe07g1822 | 1276 | ProSiteProfiles | Ankyrin repeat profile. | 70 | 102 | IPR002110 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | SMART | ring_2 | 444 | 488 | IPR001841 | - | |
Hepe07g1822 | 1276 | SUPERFAMILY | RING/U-box | 442 | 494 | - | - | |
Hepe07g1822 | 1276 | FunFam | Integrin-linked protein kinase family | 231 | 424 | - | - | |
Hepe07g1822 | 1276 | Pfam | RING-type zinc-finger | 444 | 486 | IPR027370 | - | |
Hepe07g1822 | 1276 | SUPERFAMILY | WD40 repeat-like | 969 | 1263 | IPR036322 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | Gene3D | - | 1051 | 1272 | IPR015943 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | SMART | ANK_2a | 103 | 133 | IPR002110 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | SMART | ANK_2a | 70 | 99 | IPR002110 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | SMART | ANK_2a | 37 | 66 | IPR002110 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | FunFam | serine/threonine-protein kinase STY46-like | 148 | 231 | - | - | |
Hepe07g1822 | 1276 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 972 | 1011 | IPR001680 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 1103 | 1142 | IPR001680 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | SUPERFAMILY | Protein kinase-like (PK-like) | 164 | 410 | IPR011009 | - | |
Hepe07g1822 | 1276 | Pfam | WD domain, G-beta repeat | 1098 | 1133 | IPR001680 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | CDD | STKc_MAP3K-like | 164 | 408 | - | - | |
Hepe07g1822 | 1276 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 417 | - | - | |
Hepe07g1822 | 1276 | SUPERFAMILY | Protein kinase-like (PK-like) | 659 | 904 | IPR011009 | - | |
Hepe07g1822 | 1276 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 73 | 409 | IPR051681 | GO:0004674(PANTHER) | |
Hepe07g1822 | 1276 | Pfam | Ankyrin repeats (3 copies) | 42 | 129 | IPR002110 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | Pfam | Protein tyrosine and serine/threonine kinase | 167 | 408 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe07g1822 | 1276 | CDD | RING-HC_TRIM32_C-VII | 442 | 491 | - | - | |
Hepe07g1822 | 1276 | ProSiteProfiles | Zinc finger RING-type profile. | 444 | 489 | IPR001841 | - | |
Hepe07g1822 | 1276 | SMART | WD40_4 | 1005 | 1045 | IPR001680 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | SMART | WD40_4 | 1096 | 1133 | IPR001680 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | SMART | WD40_4 | 1178 | 1215 | IPR001680 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | SMART | WD40_4 | 966 | 1002 | IPR001680 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | SMART | WD40_4 | 1136 | 1177 | IPR001680 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | SMART | WD40_4 | 1051 | 1093 | IPR001680 | GO:0005515(InterPro) | |
Hepe07g1822 | 1276 | SUPERFAMILY | Ankyrin repeat | 41 | 129 | IPR036770 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g1822 | Hepe-Chr7:60994318 | Hepe08g0608 | Hepe-Chr8:5332018 | 1.18e-159 | dispersed | |
Hepe02g0791 | Hepe-Chr2:9019031 | Hepe07g1822 | Hepe-Chr7:60994318 | 5.43e-92 | transposed | |
Hepe04g1948 | Hepe-Chr4:74362356 | Hepe07g1822 | Hepe-Chr7:60994318 | 4.19e-163 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72961 | PF07714 | PK_Tyr_Ser-Thr | 3.50E-53 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g1822 | - | - | - | 0.0 |