Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1822 ATGGAAACGAATAACGGTTGCAACGGGGTGAGGTTTTTGCTGGGGAAGCAATCGTCGATGGCGCCGGAGCGGCAGGCGGAGGAGGCGGTGGAGGACGGGGAGGAAATCGATCCGGGGGTGAGATTGATGTATTCGGCGAATGAAGGCGATTTGGAAGGGATTAAGGAGCTTCTAGATTCTGGAATTGATGTTAATTTTCACGATGTTGATTATCGGACGGCGCTTCATATTGCTGCTTGTCAAGGCTGCTCGGAAATCGTCGATTTGTTGCTCCGGCGAGGCGCTGAGATTGACCCTAAAGATCGCTGGGGTAGTACGCCTCTTGCAGATGCAATATTCTACAAAAACCATGAAGTTATCAAATTGTTAGAAAAAAGTGGCGCAAAACATCTGAATGCTCCCATGCTCGTCAAACATGCTCGTGAAGTCCCAGAATATGAAATTGATCCTAAAGAATTTGACTTCACAAACAGTGTCAACTTGACCAAGGGAACCTTCCATCTAGCATCATGGCGCGGAATCCAAGTTGCAGTCAAAGAGCTTCCAGAAGATGTAATTTTAGAGAAGGACAAAGTGAATGCTTTTAGAGATGAGCTTGCGTTGCTTCAGAAGATTCGGCATCCTAATGTAGTTCAATTTCTTGGTGCTGTCACTCAAAGTAGTCCCATGATGATTGTTACTGAATTTTTGCCAAAGGGAGATCTTTGTCAACTTTTACAGAGAAAAGGAGCATTAAAACCAATTGTAGCTGTGAAATTTGCCCTTGATATTGCAAGGGGAATGAACTATTTGCACGAAAACAAACCTGCACCGATCATCCACCGCGATCTTGAGCCATCAAATATATTGCGAGATGACACTGGGAACCTGAAAGTTGCAGACTTTGGTGTTAGCAAGTTGCTCACAGTCAAGGAGGATAAGCCTCTAACTTGTCAAGACACTGCTTGCCGATATGTCGCTCCAGAAGTTTTCAAAAACAATGGATACGATACCAAAGTAGATGTTTTCTCCTTTGCTTTAATTCTACAAGAGATGATTGAAGGGCAACCGCCATTTTCAACCAAGAAAGAAAATGCCATTCTTAAAGAGTATGCATCCGGAGTACGCCCAGCCTTCCAAGCTCCAGCTAAATTATACGCCCATGGAATTAAAGAGTTGATTGAAGATTGCTGGAATGAGAAGCCATCAAAGAGACCAACTTTTAGACAGATAATCACAAGGCTGGAAACCATTCATCACAGTCTTAGCCACAGAAGGCGTTGGAAGGGTAAATCTCAGCCTCCACTTGGCCGACGAATGATCGAAGGTACAGAAATGGAGTTTCCCGAGTGCCCAGTTTGCCTGCAAACATACGACGGCGAATCCACAGTTCCTCGTGTTCTCTCTTGTGGCCACTCAGCCTGCGGAATCTGCCTCCAGAATCTCCCTCAGCGATACCCCGAAACCATTAGATGTCCCGCCTGCAACGTTCTCGTCAAATTCCCCTTTCAAGGCGCTTCAGCGCTCCCCAAAAACATCGATCTCCTCAGACTCTGCCCCCAGCTGAACGCCGATGATCAAACTTCCAAAAAACCTCTCAAACGACGACCCATCGATCAAAACTACGAGTTGTTCCCTCGGGTTTGGTCCGATGAATTCTACAAAGCTTGGAAGCAATGGATCCTGCCGCACGACGCCGTTTCGATCGACCGGAGAGATGGCGATGACGGAGTGGGAAGAATTGGTTCCGTTTCAGATTCAGGTTCTTCTTTCCCAATCAGGGTTGGAGACGACCGGACTGTAAGTCTTGTTCGAGTCGTTTCGTTGCCTTGTTCGAATAGTGATTCTGTGCTCAAGTTTAGTTATATTTCAATGGTTTTGAAATGCTTGAGTGAATTGAAGGATGGGGAGAGGAATGAACTGGGTTTGGTTTTGGGAACTGGTTTTGTGAATGGTGGAAGATTTTGTAGAACTTATGGGTTGTGGGGTAATTTGGAGGATGGGTTTCTGTACTTGGTATGTGAGAAACGAACTGAGGACGTAGTGGAGAGGATTAACAATTGGATAAAGAAACTTGATATCAGAAATAAGGTTGGTTTGAATAAAGATGAGATGTGCAGTTTCGCCATGATTGCCATTGAGTTATGTGAAGCAATCATCGGTATGCATTCTCTGAGGTTAAGTACTGGCTTTTTGAGTCTTTCATGTTTTAGTGTTGGTGAATTTGGTGGTGTTTGTGTTGATGTAAATGGGGTTTTGGTGATGGGAAGAACTGTTCGGGAGATGGTGGTGGAAGCTGTTTCTACCGGATCAAAACTCGACTCCAAGGAATTGGGAATTCTTATTAGTAATCTGATAAAGAAAGAGGTTTTTGTCAGCCCAGAAGTTTTGCTCAAATTACTGCATAAAGAAGGCATTGAGCTGGAATGTGGCACGACTCTATGTTCGGTCGGGAACAAGTGCGATATTTGGTCCTTAGTTTTTGTTTTGCTGAGTCTTCTTCTTGGAAAGGAATGCTTTGAAGAGACACTGGGGACTCTAGAAGGAATTCATTCTGATTTCTCTGCCTTTTATGGGAGTTGGATGGAGAAAGTTAATTCTTGTTTGGACATGAAGTTAGGTTTGGAGTATGCATCGTTGAGACAGGCACTCTGCAAGTCTTTAAGTTTCGTTCCTGAAAACCGTACGTGTGTTGTTGAATTGTTGAGATGCTTTAGGGAACTGATTGTTAGTTCTGAGTTGGATGCTTTGGCCAGTTTGAAACTTGCAGTTAATGAATATGGTGTTCATCATTGCTTGGTTTTGGGGGACCTCATTCAACTTCCCAACAAATTGATTGAAACTCAAAGCGATGATACGGATCAAATCGTGGAGGAGAAAACAACAAAAGATTTTGTTGATGGGCTATCAGTTGGAATGGTGAAGTCTAGAGACATGCTGAGCCATCGTGATAGTATTACTGGTTTAGTAGTTGGTGGGGATTATCTGTTTAGCTCGTCATATGATAAGACTGTCCAAGCATGGTCTTTGCAAGACTTCTCTCATGTACACACATTTATCGGTCACGAGCATCGAGTAATGGATTTGGCATATATTGCTGAAGAACAACCATTATGTGTAAGTGCTGATATTGGAGGTGGTATATTTGTCTGGAGCATTGCTCTTCCTCTCAAGCAAGATCCATTAAAGAAATGGTACGAGGAGAAGGATTGGCGCTACGATGGCATTCATGCCTTGGCCTACTCAGGAAATGGGTACCTTTATACCGGTGGAGGCGATAAATCTATTAAAGCGTGGTCATTAAAGGATGGCACCTTATCAAGCACTATGCACGGTCATAAATCGGTAGTTTCCGCTCTTGTAGCAAGTAATGGCATTCTTTATAGTGGCAGTTGGGATGGAACCGTTCGATTATGGAGTCTTGCCGATCATAGTCAGTTGACCGTACTCGGGGAAGAATCATCTGGAAGTTTGGGTTCTATCCTATGTCTGGCTGCTAACATGGACATGCTTGTTGCAAGTCATGAAAAAGGATCCATAAAGGTTTGGAGGAATGATGTATTTATGAAAACCTTGAAGTTGCATGATGGTGCCATTTTTGCCACCAGCATGCAGGGGAAGCAACTCATCACGGGGGGTCGAGATAAAGCCGTAAATGTACAGGAGTTATCAGGCGACGAGTTCGAGATTGATTGTAGACATCTTGGATCTATCCCTTCAAATTCTACAGTAACAGCATTATTGTGTTGGCAAAGCAAACTTTATGTTGGATATGCAGATAGGTATATTAAGACCCCGAAGCTACAACGACGTTCATTTTTTCGTCTTAAAGACGAAAAATTGAACAATTGA 3831 43.7 METNNGCNGVRFLLGKQSSMAPERQAEEAVEDGEEIDPGVRLMYSANEGDLEGIKELLDSGIDVNFHDVDYRTALHIAACQGCSEIVDLLLRRGAEIDPKDRWGSTPLADAIFYKNHEVIKLLEKSGAKHLNAPMLVKHAREVPEYEIDPKEFDFTNSVNLTKGTFHLASWRGIQVAVKELPEDVILEKDKVNAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEFLPKGDLCQLLQRKGALKPIVAVKFALDIARGMNYLHENKPAPIIHRDLEPSNILRDDTGNLKVADFGVSKLLTVKEDKPLTCQDTACRYVAPEVFKNNGYDTKVDVFSFALILQEMIEGQPPFSTKKENAILKEYASGVRPAFQAPAKLYAHGIKELIEDCWNEKPSKRPTFRQIITRLETIHHSLSHRRRWKGKSQPPLGRRMIEGTEMEFPECPVCLQTYDGESTVPRVLSCGHSACGICLQNLPQRYPETIRCPACNVLVKFPFQGASALPKNIDLLRLCPQLNADDQTSKKPLKRRPIDQNYELFPRVWSDEFYKAWKQWILPHDAVSIDRRDGDDGVGRIGSVSDSGSSFPIRVGDDRTVSLVRVVSLPCSNSDSVLKFSYISMVLKCLSELKDGERNELGLVLGTGFVNGGRFCRTYGLWGNLEDGFLYLVCEKRTEDVVERINNWIKKLDIRNKVGLNKDEMCSFAMIAIELCEAIIGMHSLRLSTGFLSLSCFSVGEFGGVCVDVNGVLVMGRTVREMVVEAVSTGSKLDSKELGILISNLIKKEVFVSPEVLLKLLHKEGIELECGTTLCSVGNKCDIWSLVFVLLSLLLGKECFEETLGTLEGIHSDFSAFYGSWMEKVNSCLDMKLGLEYASLRQALCKSLSFVPENRTCVVELLRCFRELIVSSELDALASLKLAVNEYGVHHCLVLGDLIQLPNKLIETQSDDTDQIVEEKTTKDFVDGLSVGMVKSRDMLSHRDSITGLVVGGDYLFSSSYDKTVQAWSLQDFSHVHTFIGHEHRVMDLAYIAEEQPLCVSADIGGGIFVWSIALPLKQDPLKKWYEEKDWRYDGIHALAYSGNGYLYTGGGDKSIKAWSLKDGTLSSTMHGHKSVVSALVASNGILYSGSWDGTVRLWSLADHSQLTVLGEESSGSLGSILCLAANMDMLVASHEKGSIKVWRNDVFMKTLKLHDGAIFATSMQGKQLITGGRDKAVNVQELSGDEFEIDCRHLGSIPSNSTVTALLCWQSKLYVGYADRYIKTPKLQRRSFFRLKDEKLNN 1276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 60994318 61004805 - Hsped.07g18220.1 Hepe07g1822 575217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1822 1276 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Hepe07g1822 1276 Gene3D - 937 1049 IPR015943 GO:0005515(InterPro)
Hepe07g1822 1276 Gene3D - 15 142 IPR036770 -
Hepe07g1822 1276 ProSiteProfiles Protein kinase domain profile. 120 415 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1822 1276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 435 524 IPR013083 -
Hepe07g1822 1276 FunFam Integrin-linked protein kinase family 22 146 - -
Hepe07g1822 1276 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1103 1134 - -
Hepe07g1822 1276 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515(InterPro)
Hepe07g1822 1276 SMART ring_2 444 488 IPR001841 -
Hepe07g1822 1276 SUPERFAMILY RING/U-box 442 494 - -
Hepe07g1822 1276 FunFam Integrin-linked protein kinase family 231 424 - -
Hepe07g1822 1276 Pfam RING-type zinc-finger 444 486 IPR027370 -
Hepe07g1822 1276 SUPERFAMILY WD40 repeat-like 969 1263 IPR036322 GO:0005515(InterPro)
Hepe07g1822 1276 Gene3D - 1051 1272 IPR015943 GO:0005515(InterPro)
Hepe07g1822 1276 SMART ANK_2a 103 133 IPR002110 GO:0005515(InterPro)
Hepe07g1822 1276 SMART ANK_2a 70 99 IPR002110 GO:0005515(InterPro)
Hepe07g1822 1276 SMART ANK_2a 37 66 IPR002110 GO:0005515(InterPro)
Hepe07g1822 1276 FunFam serine/threonine-protein kinase STY46-like 148 231 - -
Hepe07g1822 1276 ProSiteProfiles Trp-Asp (WD) repeats profile. 972 1011 IPR001680 GO:0005515(InterPro)
Hepe07g1822 1276 ProSiteProfiles Trp-Asp (WD) repeats profile. 1103 1142 IPR001680 GO:0005515(InterPro)
Hepe07g1822 1276 SUPERFAMILY Protein kinase-like (PK-like) 164 410 IPR011009 -
Hepe07g1822 1276 Pfam WD domain, G-beta repeat 1098 1133 IPR001680 GO:0005515(InterPro)
Hepe07g1822 1276 CDD STKc_MAP3K-like 164 408 - -
Hepe07g1822 1276 Gene3D Transferase(Phosphotransferase) domain 1 151 417 - -
Hepe07g1822 1276 SUPERFAMILY Protein kinase-like (PK-like) 659 904 IPR011009 -
Hepe07g1822 1276 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 73 409 IPR051681 GO:0004674(PANTHER)
Hepe07g1822 1276 Pfam Ankyrin repeats (3 copies) 42 129 IPR002110 GO:0005515(InterPro)
Hepe07g1822 1276 Pfam Protein tyrosine and serine/threonine kinase 167 408 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1822 1276 CDD RING-HC_TRIM32_C-VII 442 491 - -
Hepe07g1822 1276 ProSiteProfiles Zinc finger RING-type profile. 444 489 IPR001841 -
Hepe07g1822 1276 SMART WD40_4 1005 1045 IPR001680 GO:0005515(InterPro)
Hepe07g1822 1276 SMART WD40_4 1096 1133 IPR001680 GO:0005515(InterPro)
Hepe07g1822 1276 SMART WD40_4 1178 1215 IPR001680 GO:0005515(InterPro)
Hepe07g1822 1276 SMART WD40_4 966 1002 IPR001680 GO:0005515(InterPro)
Hepe07g1822 1276 SMART WD40_4 1136 1177 IPR001680 GO:0005515(InterPro)
Hepe07g1822 1276 SMART WD40_4 1051 1093 IPR001680 GO:0005515(InterPro)
Hepe07g1822 1276 SUPERFAMILY Ankyrin repeat 41 129 IPR036770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1822 Hepe-Chr7:60994318 Hepe08g0608 Hepe-Chr8:5332018 1.18e-159 dispersed
Hepe02g0791 Hepe-Chr2:9019031 Hepe07g1822 Hepe-Chr7:60994318 5.43e-92 transposed
Hepe04g1948 Hepe-Chr4:74362356 Hepe07g1822 Hepe-Chr7:60994318 4.19e-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72961 PF07714 PK_Tyr_Ser-Thr 3.50E-53 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1822 - - - 0.0