Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1830 ATGGTGGCCAAGAGCTTCTTCGTTTTCATTGTTCTTGCGGTGGATTGCTTCATGTTCTTGAGATTTGCAGATTCTAAGCTTCCCCAAGAAGAGGTTGATGCACTACAGCAAATTACGAGAACATTGGGTGCAGTTTATTGGAAATTCAATAGTGACTCCTGTGCCGTTGAAATGTTTGGGATCACAGAAAAACCTCCGAGGGGATCTGAGGCTAGAATTGGTTGTGATTGCAACCTCGAGAACAGCACAATTTGTCATGTCGTAAGGATAGAATTAAAAAATCACAATCTGCCCGGTGTTCTTCCACCTGAAATAGTCAAGCTTCCTTACCTGCAAGAAGTTGATTTTGCTTACAACTACCTTCATGGTAATATACCTCGGGAGTGGGCTTCAATGCGGCTGACTAAAATCTCTCTTCTTGTAAATCGGTTATCAGGGGAAATACCATCGGAATTAGGGAATATTACTACTTTAACATACCTAACCCTTGAAGCTAACCAATTTACTGGTGCAATTCCATCACAACTTGGGAGGTTAAGCAACCTGCAAACCTTGATGCTATCATCTAATCAACTGACTGGCACATTGCCGACAACGTTTGCTGGATTGAAAAACCTAACAGATTTTCGAATGAATGATAACAACCTCAATGGAACCATACCTGGCTTCATACAGAATTGGAAACTACTCAAAAGATTAGAACTACATGCAAGTGGACTTCAGGGACCAATTCCTGCAAAAATATCCCTCCTGAGTAACTTAGAAGAGTTGAGGATCAGTGATATTAATGGGCCAAAGCAGGATTTTCCTGAGTTGACAAACATGACGGGCATAATTAGATTGGTTCTGAGAAATTGTAACATTGCTGGAAAGATTCCTTCATATGTGTGGACGATACCAACTATGGAAATGCTGGACCTCAGCTTTAACCAGATGACTGGGGAGGTTCCAGAAAATATAAACATGGAGCGCATTAGATTTCTCTTCTTAAGTGGCAATATGCTGAGTGGCAACCTACCAGAGTCAATCTTGAAGGATGGAACTAATGTCGATCTTTCATACAATAACTTGGCATGGCAAGGCCCTGAGGAGCATGCTTGTAGAAAGAATTTGAATATGAATCTGAACTTGTTTCGAAGTTCTTCCACCAGCAACACCTCACAGGAAAGTCTCCCCTGCTTGAAGGATTCCATCTGTTCAAGATATTCAAAATGTTGGTTCATCAATTCTGGTGGGAATGACTTAACCTTGAAGGTAAACAACAAAAACATTCTCTACAATGGGGATGGAGATGTTGAAGGTGGGACGGCAAAATTCTATATTGATCATGATAGCTACTGGGGATTGAGTAGTACTGGAGATTTCATGGATGATTTTGATTACCAAAATACGCGTTACACTTTATCCCTGCCTTCATCAAATTTGTCCGAGCTATATTCAACAGCGCGTCGTAGTCCAATTTCGCTCTCTTATTTCCATCATTGCTTGGATAATGGAAACTACTCAGTGAAGCTTCATTTTGCAGAGATACAATTTACAGATGATAAGACATATGCAAGTCTTGGAAGGCGGAAATTTGATATCTACATTCAGGATAGGTTGATATTGGAGAATTTTGATATTGAAGAGAGGGCGGGAGGAGCTCGAAAACCAACAGAAATGCAGTTTGCTAACATTACTGTAACTAATCATGTCCTGGAAATCCGATTCTATTGGGCTGGAAAAGGGACAACTAGGATTCCTGATAGAGGAGTTTATGGTCCACTTATATCAGCTATTTCTGTTTATTCTGATCTTAAATATTGTTCAATCCGTGGAAGTGGTAAAAAGAAAACTGTAGCTCTCGCCGTTGGAGTTACGGTTGGCTTATTATGTCTTGCTGCAATCATCATAATGGGTCTTCTTTGGAGGAAAGGCACCCTTAGAGCAATCAGGCGGAGTAAAGGTGGTACAGATCTTGCAGGAATAGAGGTGCAAACTGGAATTTTTACCTTGAAACAAATAAAAGCTGCCACCAATAATTTTGATTCTTGTAATAAAATTGGAGAAGGTGGTTTTGGCCCTGTTTATAAGGGTCAATTGGCTGATGGTACCTTCGTAGCAATTAAGCAGCTCTCATCCAAATCAAAGCAGGGAAATCGCGAATTTCTGAATGAGATAGGAATGATCTCTTGTTTGCAACACCCAAATCTAGTGAAGCTCCATGGATGCTGTATTGAAGGGAATCAATTGTTGTTGGTGTATGAATATTTGGAAAACAATAGTCTTGCCCGAGCATTATTTGGTCCAGATTACAGTCGGCTAAATCTAGATTGGCCAACCCGGCTTAGAATTTGTATCGGTATAGCGAAAGGCTTAACATATCTCCATGAGGAATCGAGCCTTAAAATTGTTCACAGAGACATCAAAGCTACTAATGTGCTACTGGATGGCGAATTGAATCCTAAAATATCTGATTTTGGTTTGGCTAAGCATGACGATGAGGAGAAGACTCACATGACCACCAGAGTGGCCGGGACCATAGGATATATGGCCCCAGAATATGCACTTTGGGGTTATCTGACCCACAAAGCAGATGTCTATAGTTTTGGAGTTGTGGCCTTGGAAATGATCAGTGGAAGAAGCAACAATGATTATGTACCAAGTGAAACTTGTGTTTGCCTTCTAGATTGGGCCTGTCACTTGCAACAATCTGGGAACCTCATGGAGATGGTTGATGAGAAGTTGAGGCCAGAAATCGACAGGAAAGAAGCGGAAAATATGGTGAAAATAGCTCTTATCTGCACCAATGCTTCACCATCGGTAAGGCCAGCAATGTCGGAAGTGGTGAACATGCTCGAAGGACAAATGGAAATTCCAGAACTGATCCCGGAACCGAGTTCTTATAGTGAAGATCTGAGGTTCAAGGCGATGAGAGATATGCGTAAACAGCAACAGAGCCAAAGCCTGAGTGAAAGCCAGACACAAAATAATTCCACAATGCAAACATTTGGGTCTTCCTCTACATCTGGAAATGATTTCTATGACATCAACTCAGAGCCAAGATCATCCTAA 3054 41.19 MVAKSFFVFIVLAVDCFMFLRFADSKLPQEEVDALQQITRTLGAVYWKFNSDSCAVEMFGITEKPPRGSEARIGCDCNLENSTICHVVRIELKNHNLPGVLPPEIVKLPYLQEVDFAYNYLHGNIPREWASMRLTKISLLVNRLSGEIPSELGNITTLTYLTLEANQFTGAIPSQLGRLSNLQTLMLSSNQLTGTLPTTFAGLKNLTDFRMNDNNLNGTIPGFIQNWKLLKRLELHASGLQGPIPAKISLLSNLEELRISDINGPKQDFPELTNMTGIIRLVLRNCNIAGKIPSYVWTIPTMEMLDLSFNQMTGEVPENINMERIRFLFLSGNMLSGNLPESILKDGTNVDLSYNNLAWQGPEEHACRKNLNMNLNLFRSSSTSNTSQESLPCLKDSICSRYSKCWFINSGGNDLTLKVNNKNILYNGDGDVEGGTAKFYIDHDSYWGLSSTGDFMDDFDYQNTRYTLSLPSSNLSELYSTARRSPISLSYFHHCLDNGNYSVKLHFAEIQFTDDKTYASLGRRKFDIYIQDRLILENFDIEERAGGARKPTEMQFANITVTNHVLEIRFYWAGKGTTRIPDRGVYGPLISAISVYSDLKYCSIRGSGKKKTVALAVGVTVGLLCLAAIIIMGLLWRKGTLRAIRRSKGGTDLAGIEVQTGIFTLKQIKAATNNFDSCNKIGEGGFGPVYKGQLADGTFVAIKQLSSKSKQGNREFLNEIGMISCLQHPNLVKLHGCCIEGNQLLLVYEYLENNSLARALFGPDYSRLNLDWPTRLRICIGIAKGLTYLHEESSLKIVHRDIKATNVLLDGELNPKISDFGLAKHDDEEKTHMTTRVAGTIGYMAPEYALWGYLTHKADVYSFGVVALEMISGRSNNDYVPSETCVCLLDWACHLQQSGNLMEMVDEKLRPEIDRKEAENMVKIALICTNASPSVRPAMSEVVNMLEGQMEIPELIPEPSSYSEDLRFKAMRDMRKQQQSQSLSESQTQNNSTMQTFGSSSTSGNDFYDINSEPRSS 1017
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 61087546 61098244 - Hsped.07g18300.1 Hepe07g1830 575225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1830 1017 Gene3D Ribonuclease Inhibitor 197 394 IPR032675 -
Hepe07g1830 1017 Pfam Malectin domain 405 593 IPR021720 -
Hepe07g1830 1017 SUPERFAMILY L domain-like 83 318 - -
Hepe07g1830 1017 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 972 IPR051824 -
Hepe07g1830 1017 Gene3D Transferase(Phosphotransferase) domain 1 751 955 - -
Hepe07g1830 1017 SMART serkin_6 675 927 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1830 1017 CDD STKc_IRAK 681 948 - -
Hepe07g1830 1017 MobiDBLite consensus disorder prediction 972 1017 - -
Hepe07g1830 1017 Gene3D Ribonuclease Inhibitor 31 196 IPR032675 -
Hepe07g1830 1017 FunFam Putative LRR receptor-like serine/threonine-protein kinase 751 958 - -
Hepe07g1830 1017 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 196 - -
Hepe07g1830 1017 MobiDBLite consensus disorder prediction 975 1017 - -
Hepe07g1830 1017 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 598 - -
Hepe07g1830 1017 SUPERFAMILY Protein kinase-like (PK-like) 659 983 IPR011009 -
Hepe07g1830 1017 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 263 - -
Hepe07g1830 1017 Gene3D - 404 599 - -
Hepe07g1830 1017 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 265 386 - -
Hepe07g1830 1017 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 645 750 - -
Hepe07g1830 1017 Pfam Protein tyrosine and serine/threonine kinase 679 946 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1830 1017 Gene3D Phosphorylase Kinase; domain 1 640 750 - -
Hepe07g1830 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 797 809 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1830 1017 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515(InterPro)
Hepe07g1830 1017 ProSiteProfiles Protein kinase domain profile. 675 955 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1463 Hepe-Chr1:79934998 Hepe07g1830 Hepe-Chr7:61087546 2.18e-260 dispersed
Hepe01g1464 Hepe-Chr1:79952648 Hepe07g1830 Hepe-Chr7:61087546 1.68e-260 dispersed
Hepe07g0962 Hepe-Chr7:12912952 Hepe07g1830 Hepe-Chr7:61087546 5.61e-221 dispersed
Hepe07g1830 Hepe-Chr7:61087546 Hepe07g1930 Hepe-Chr7:63081193 2.31e-89 dispersed
Hepe01g1593 Hepe-Chr1:81241146 Hepe07g1830 Hepe-Chr7:61087546 9.59e-72 transposed
Hepe07g0502 Hepe-Chr7:5285970 Hepe07g1830 Hepe-Chr7:61087546 8.23e-77 transposed
Hepe02g0061 Hepe-Chr2:705993 Hepe07g1830 Hepe-Chr7:61087546 1.79e-220 wgd
Hepe02g0134 Hepe-Chr2:1493036 Hepe07g1830 Hepe-Chr7:61087546 3.59e-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72962 PF07714 PK_Tyr_Ser-Thr 2.90E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1830 - - - 0.0