Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1834 ATGACATCGGGGTCCGGGTCGAGAATGCCGACTTGGAAGGAGAGGGAGAACAACAAGCGCCGTGAGAGACGCCGCCGTGCCATCGCCGCTAAGATCTTTCTTGGCTTGCGTATGTACGGCAACTACAAGCTCCCCAAGCACTGCGACAATAATGAAGTCCTCAAAGCCCTCTGCGATGAAGCTGGATGGACTGTCGAGGAAGATGGCACTACCTATCGGAAGGGATGCAAGCCTCTGGAACGTGATATCATGGGCGGATCAGCTTCTGCAAGTCCATGTTCATCTTACCAGCCAAGCCCATGTGCATCTTATAACCCAAGTCCTGCGTCTTCTTCCTTCCCTAGCCCCACCTCTTCCCGTTACGCGATGAAAGGTAATGACAATGCTGCTGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTCTCCTCAGGTTCATCATCAGCTTCCTCCAGGCTCCCTCACCATAATCTTTACATAACTGGCTCCATAAGTGCGCCTGTCACCCCTCCATCGAGCTCCCCCACAGCTCGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGCTGCTCCTGCTTGGGCTGCACAGCGCTTCTTATGCTTGCCTGCATCAACCCCACAGAGCCCTGGTCGTCATCAAGTGTTGCCTGATTCAGCATGGCTTGATAGTATGCGGATTCCTCAGAGTGGACCATCGTCTCCAACCTTCAGCCTTGTGGCAAGGAATCCGTTCGGGTTTAAGGAGGCAATGTCCGCTGGAGCGTCTCGTAATTGGACTCCTACACAGAGCGGGACTTGCTCGCCCACGATTGCTGCAGGCACTGATCAAACTTCAGATGTTCCAATGGCGGATGGAACTGCAGCAGAGTTTGCCTTCGGGAGTTGTTCGATTGGGTTAGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAGTTTGTCTCTGATGATCTTGAACTTACACTAGGGAATTCAAGAACAAGATAA 993 52.27 MTSGSGSRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPLERDIMGGSASASPCSSYQPSPCASYNPSPASSSFPSPTSSRYAMKGNDNAADPNSLIPWLKNLSSGSSSASSRLPHHNLYITGSISAPVTPPSSSPTARTPRKPNDWDNHPAAAPAWAAQRFLCLPASTPQSPGRHQVLPDSAWLDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGASRNWTPTQSGTCSPTIAAGTDQTSDVPMADGTAAEFAFGSCSIGLVKPWEGERIHEEFVSDDLELTLGNSRTR 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 61122013 61124890 - Hsped.07g18340.1 Hepe07g1834 575229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1834 330 MobiDBLite consensus disorder prediction 104 126 - -
Hepe07g1834 330 MobiDBLite consensus disorder prediction 162 190 - -
Hepe07g1834 330 MobiDBLite consensus disorder prediction 1 23 - -
Hepe07g1834 330 MobiDBLite consensus disorder prediction 104 124 - -
Hepe07g1834 330 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 143 IPR008540 -
Hepe07g1834 330 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 5 330 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0964 Hepe-Chr7:12953406 Hepe07g1834 Hepe-Chr7:61122013 6.17e-139 dispersed
Hepe07g1834 Hepe-Chr7:61122013 Hepe10g0663 Hepe-Chr10:8780424 3.77e-52 dispersed
Hepe07g1834 Hepe-Chr7:61122013 Hepe04g1483 Hepe-Chr4:70471002 2.71e-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55997 PF05687 BES1_N 1.00E-66 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1834 - - - 0.0