Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1840 ATGGATGATGCTACCTTCAACAATATTAATAACAACCATGCCCAATTCTATTATTCTGCTGATCATTTAGAAGATAGTGACGAAAAAGCCCCTGATTCTCCTCCTCCTCCTCCTCCTCCTCATTCCACCGCCGCCGCCGCCGCCGCCAAAAAGGGCAGACGAGGGATGAAGAAGAAAGTGGTGTCGGTGAGAATCAACGGTGACACCCCAAGGAATTCTTCTGGTTCTACTACTCCTCCTTCTGATTCTTGGGCTTGGAGAAAGTACGGTCAAAAACCCATCAAAGGCTCCCCTTATCCAAGGGCGTATTATCGGTGTAGTAGTTCGAAAGGATGTCCAGCTAGGAAACAAGTAGAGAGGAATCGGCTTGATCCAACCATGTTGGTCATTACATATTCGTGTGAGCATAATCATTCCGGTCCGGTTTCCCGAAACAACAACAATCACCACCAAGCCGCGGCGGCCACCGCCGCGACCAAACCCGGTTCTCCAGAGACTCATATCCCGGTTCAACCAGAACCCGAACCGGAAGTCGAAGAGAAATTCGTGGATATGGGAGAGGAGTCGTTGATAACCGGAGACGAGTTCAGTTGGTTCGGGGAAATGGAAACGACGTCGTCGACGGTGCTCGAAAGCTCCATTTTCTCCGGCAGATCCAGCGGAGTTGGAGATTCGATTTCCAGTGACGTGGCAATGCTTTTTCCGATGGTGGGGGATGATGACGTCGACGAATCGCTGTTTGCCGATCTCGGTGAGTTGCCGGAGTGCTCGGTTGTTTTCCGGCGCGGCGGAGGCCGGGGATTGACGGTGGATGAACAACCGCCTGCAGACCAGCGGCGGATCACTCCGTGGTGCGGAACCACCACCTGA 870 52.76 MDDATFNNINNNHAQFYYSADHLEDSDEKAPDSPPPPPPPHSTAAAAAAKKGRRGMKKKVVSVRINGDTPRNSSGSTTPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSSKGCPARKQVERNRLDPTMLVITYSCEHNHSGPVSRNNNNHHQAAAATAATKPGSPETHIPVQPEPEPEVEEKFVDMGEESLITGDEFSWFGEMETTSSTVLESSIFSGRSSGVGDSISSDVAMLFPMVGDDDVDESLFADLGELPECSVVFRRGGGRGLTVDEQPPADQRRITPWCGTTT 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 61214847 61216403 - Hsped.07g18400.1 Hepe07g1840 575235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1840 289 MobiDBLite consensus disorder prediction 265 289 - -
Hepe07g1840 289 Pfam WRKY DNA -binding domain 82 138 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g1840 289 Gene3D WRKY domain 68 142 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g1840 289 MobiDBLite consensus disorder prediction 16 88 - -
Hepe07g1840 289 MobiDBLite consensus disorder prediction 66 84 - -
Hepe07g1840 289 SUPERFAMILY WRKY DNA-binding domain 77 140 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g1840 289 ProSiteProfiles WRKY domain profile. 81 141 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g1840 289 SMART WRKY_cls 80 140 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g1840 289 FunFam WRKY transcription factor 65 64 141 - -
Hepe07g1840 289 MobiDBLite consensus disorder prediction 139 175 - -
Hepe07g1840 289 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 43 257 IPR044810 GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe07g1840 289 MobiDBLite consensus disorder prediction 139 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1659 Hepe-Chr7:57982642 Hepe07g1840 Hepe-Chr7:61214847 1.12e-32 dispersed
Hepe07g1840 Hepe-Chr7:61214847 Hepe08g1152 Hepe-Chr8:11676588 1.84e-26 dispersed
Hepe02g0116 Hepe-Chr2:1353391 Hepe07g1840 Hepe-Chr7:61214847 2.61e-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55999 PF03106 WRKY 6.20E-25 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1840 - - - 0.0