Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1867 ATGATGATGATGACAGAGAGAAAGAACAATAATCAAGAAGATCATGAGGGTGGAATTAAGCTTTTTGGTGCAACAATTATGTTGCAGCAAAATAATAATAGAGATCAAGTGAAAGAAGAGGATAATCAAGAAGAAGAAGAAGAAGAAGAGGCTGAGAAATCATCATCAGCTGAAAAAAAGCCTGAGAAGATCATTGGTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTACTTCAACAATTACAATGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGTCAGCGCTACTGGACGGCCGGTGGCGCCCTCCGCAACGTCCCCGTTGGAGCCGGCCGCCGCAAAACCAAGCCGCCGTGCCGCTCCTTCGGTGGCTTGCCGGAGAATTGTGTCTTTGATTCTTCAGGGGTGGTCGCGGTGCAACCCTTTGAGTTGGAGGGTATGGTCGAGGAGTGGCATGTCGCCACCGCGCAGGGTGGTTTCCGGCAAATTTTACCGGTGAAGCGGCGGAGGGATTGCCAAGACGGTCAAGCCTGTTGA 543 48.99 MMMMTERKNNNQEDHEGGIKLFGATIMLQQNNNRDQVKEEDNQEEEEEEEAEKSSSAEKKPEKIIGCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRSFGGLPENCVFDSSGVVAVQPFELEGMVEEWHVATAQGGFRQILPVKRRRDCQDGQAC 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 62206063 62206796 + Hsped.07g18670.1 Hepe07g1867 575262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1867 180 Coils Coil 27 57 - -
Hepe07g1867 180 MobiDBLite consensus disorder prediction 1 60 - -
Hepe07g1867 180 Pfam Dof domain, zinc finger 63 118 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe07g1867 180 ProSitePatterns Zinc finger Dof-type signature. 67 103 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe07g1867 180 ProSiteProfiles Zinc finger Dof-type profile. 65 119 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe07g1867 180 PANTHER CYCLIC DOF FACTOR 2 29 119 IPR045174 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1867 Hepe-Chr7:62206063 Hepe07g2505 Hepe-Chr7:69383785 1.71e-35 dispersed
Hepe04g1859 Hepe-Chr4:73552504 Hepe07g1867 Hepe-Chr7:62206063 4.55e-23 wgd
Hepe04g1916 Hepe-Chr4:74059517 Hepe07g1867 Hepe-Chr7:62206063 3.31e-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56001 PF02701 zf-Dof 1.30E-31 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1867 - - - 0.0