Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1885 ATGCCTGTCCTCTGTTTTCTCACTCTGCTCCTCATTTTCCACACACCATCAAAATGTGTAGCTACTGCAGCACCACCACCTAAACAAGCAGCCCGCCGCCCCCGCCTCCTCTCCGTCGATTACTACAACAAAACATGCCCGCACCTCGACCAACTCATCTCCTCAATCACCACCCAACAGTTCAGAGACGCACCAGTCTCTGCTCCAGCAACACTACGCCTCTTCTTCCATGATTGCTTTGTAGAAGGCTGTGATGGGTCGATTCTGATATCGACGAAGCCAGGCAGCAAACTGGCGGCCGAGAAGGATGCAGCGGACAACAAGGGGCTGAGAGTGGAAGGGTTTGAAAGCATCAAGAAGGCCAAGGCGTTGGTTGAGAGCAAGTGCCCCGGCGTTGTGTCTTGTGCTGACATCCTCGCAATTGCAGCCAGAGATTTTATCCATTTGGCAGGAGGTCCGTATTACCAGGTGAAGAAGGGACGATGGGACGGGAAGATATCAATGGCGTCCAGAGTAGGTTCCAATCTGCCGCGAGCAAATTCCACCGTCGATCAGATTCTCAAACTCTTCAATTCCAAAGGTCTATCGACCGATGACCTCGTTGTCCTCTCCGGTGCGCACACGATCGGATTTGCGCACTGCGAGCACTTCACAAGCCGTCTCTACGACTACAGAGGCACGAAGCAACCGGATCCGGCAATCGACGGAAGGCTGCTGAAGGAGCTGAAAATGTCGTGCCCTCGCTACGGCGGGAATACGGATATAGTGGCGCCGTTCGACGTGACGACGCCGTTTGTGTTCGATCATGCGTACTACGGAAATTTGGAAAGTAAATTGGGACTGTTGGCTACGGATCAAGCTCTGGTTTCGGATGCGAGGATGAAGACGATGGTGCAGAGTTTGGCGAAGGATAAGCAGAAGTTTTTTCAAGCTTTCGCGGCGGCGATGGAGAAAATGGGGTCGATTGGGGTGAAGAGGGGACGAAGACATGGAGAGTGGAGGACGGATTGTAGCATTCATCAGAGTTGA 1029 52.96 MPVLCFLTLLLIFHTPSKCVATAAPPPKQAARRPRLLSVDYYNKTCPHLDQLISSITTQQFRDAPVSAPATLRLFFHDCFVEGCDGSILISTKPGSKLAAEKDAADNKGLRVEGFESIKKAKALVESKCPGVVSCADILAIAARDFIHLAGGPYYQVKKGRWDGKISMASRVGSNLPRANSTVDQILKLFNSKGLSTDDLVVLSGAHTIGFAHCEHFTSRLYDYRGTKQPDPAIDGRLLKELKMSCPRYGGNTDIVAPFDVTTPFVFDHAYYGNLESKLGLLATDQALVSDARMKTMVQSLAKDKQKFFQAFAAAMEKMGSIGVKRGRRHGEWRTDCSIHQS 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 62458456 62461183 + Hsped.07g18850.1 Hepe07g1885 575280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1885 342 ProSiteProfiles Plant heme peroxidase family profile. 36 341 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 SUPERFAMILY Heme-dependent peroxidases 37 339 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PANTHER - 32 339 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 FunFam Peroxidase 177 319 - -
Hepe07g1885 342 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 Gene3D Peroxidase, domain 2 177 319 - -
Hepe07g1885 342 FunFam Peroxidase 40 186 - -
Hepe07g1885 342 CDD secretory_peroxidase 37 338 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe07g1885 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Hepe07g1885 342 Pfam Peroxidase 57 304 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g1885 342 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601(InterPro)
Hepe07g1885 342 Gene3D - 40 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1885 Hepe-Chr7:62458456 Hepe07g2248 Hepe-Chr7:66877944 1.42e-87 dispersed
Hepe02g0108 Hepe-Chr2:1300189 Hepe07g1885 Hepe-Chr7:62458456 6.09e-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1885 K00430 - csv:101216263 618.616