Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1890 ATGCTTCTCCACCCACTCTTCCTCCTCCTCTTCACCTTCCTCTCAAACCCTTCTCTCCTCTCCCTCTCTCTTACTCAAGAAGGCCTCTATCTCCATTCCATCAAGCTCTCTCTCGACGATCCCGATTCCTCCCTCCGTTCATGGAACGACCGCGACGACACTCCCTGCTCCTGGTTCGGCGTCTCCTGCAACCCCCAAACCAACTCCGTCCACTCTCTCGACCTCTCCAGCACCAACATCGCCGGCCCATTTCCTTCTCTCCTTTGCCGTCTCCAGAATCTCTCATTCCTTTCTCTTTACAACAATTCCATCAACATGTCCCTTCCCTCTGTAATTTCAGAGTGTTCTACTCTCCAGCATCTCGACCTCTCCCAGAATCTCCTCACCGGCGCGCTTCCGTCTTCGATTTCCGATCTCCCCAACCTCCGATATCTGGATTTGACCGGGAATAACTTCTCCGGCGACATTCCACCGAGCTTCGCTCGGTTTCGGAAACTGGAGGTTTTGTCTCTTGTTTATAATCTTCTCGATGGGCCGCTGCCGGCGTTTCTCGGCAACATTACGTCGTTGAAGATGTTGAACCTGTCTTACAATCCGTTTTCGCCGAGCTTGATCCCGCTGGAGTTCGGGAATTTGACGAATCTTGAAGTGCTTTGGCTGACTCAGTGTAGTTTGATTGGGGAAATTCCGCACTCTCTTGGACGGTTGAAACGGCTCACTGATTTGGACTTGGCGTTGAATAATCTTCACGGTCCGATTCCGAAGTCGCTGATGGAATTGAGTAGTGTGGTTCAGATTGAGTTGTATAATAACTCGTTAACCGGTGATTTGCCCTCTGGATTTTCGAATCTGACCTCGTTGCGACTGTTTGACGCGTCGATGAATGGTTTGACTGGGGCGATTCCGGATGAGTTGTGTCGGTTGCCGCTTGAGAGCCTCAATCTCTATGAGAATAAGTTTGAAAGGAAGTTGCCGGAAAGCATTGCGAAATCGCCGGGTTTGTACGAACTGAGACTGTTCAGTAACCGGCTCACCGGCGAGTTACCGCGAAATCTCGGGAAGAACTCGCCGTTGAGATGGATTGATGTTTCTGACAACCAGTTTTCCGGTGAAATCCCGGAGAGTTTGTGTGAGAAGAGAGAGTTGGAGGAGCTTCTGATGATCAACAACCAGTTTTCCGGGGAGATTCCGGCGAGTTTGGGTGGGTGCGAGAGTCTGACGAGGGTGCGATTAGGATACAATCGATTTTCCGGCGAGGTTCCGGCGGGATTTTGGGGGCTCCCACATGTGTATCTTTTGGAGCTGGTGAGTAACTCGTTTTCTGGGGGAATTTCCGATGCCATTGCCTCTGCGAAGAACCTTTCGATTTTCATTATCTCTAAGAACAACTTCACGGGCACGATTCCGGCGGAGTTGGGGCGGTTGGAGACTCTTGTTAAGTTGCTAGCGACTGATAACAATCTCAATGGATCATTACCAGAGAGTCTTGTGAATCTTAGGCAGCTTTCGAGTTTGGATCTTCGAAATAATGATCTCTCTGGGGCACTTCCCACTGGAATCAAGTCGTGGAAGAATCTCAACGAACTCAATTTAGCAAACAACGAATTTTCCGGCGAAATCCCTGAAGAAATTGGGACTTTGCCTGTTCTTAATTACCTTGATCTGTCTGGAAATTTGTTTTCTGGGAAAATCCCACTTGGGTTACAGAATCTGAATCTGAATCTGCTCAATTTATCCAACAATCACTTATCCGGTGAGCTTCCTCCGTTTTTAGACAAGGGAAACTACAGAAATAGCTTCTTGGGGAATCCAGATTTGTGTGGACATTTGGAAAGCTTGTGCAACAGCAAAGGTGAAGCTAAAAGCGAAGGCTATCTCTGGTTGCTGCGATCAATCTTCTTCCTTGCTGGTGTCGTGTTTATCGTCGGTGTTGTCTGGTTTTACCTCAAGTACAGGAAGTTTAAGATGGCAAGGAGAGAAATAGAGAAGAGTAAATGGACATTGATGTCCTTCCACAAGTTGGATTTCAGTGAATATGAGATCTTGGATTGCCTTGATGAAGACAACATCATAGGCAGTGGATCTTCTGGTAAAGTTTACAAGGTTGTGCTCAACAATGGCGAGGCTGTTGCAGTAAAGAAGCTGTTTGGAGGAGGGATGAGGAAAGACGGCGAAAAAGGCGATGTCGAGAAGGGTCAAGTTCAAGACAATGGCTTCGAAGCTGAAATCGATACGCTGGGAAAGATTAGGCACAAGAACATTGTGAAGTTGTGGTGCTGCTGCGTTACAAGAGACTACAAGATGTTGGTCTATGAATATATGCCCAATGGAAGTTTGGGAGATTTGCTTCATAGTAGTAAAAAAGGACTGCTTGATTGGCCTACAAGGTTTAAGGTAGCTTTGGATGCTGCAGAAGGGCTTTCTTATCTTCATCACGATTGCGTCCCTCCGATCGTACATCGAGACGTTAAATCCAACAATATCTTGTTGGATGGTGATTTTGGAGCACGGTTGGCCGATTTCGGTGTAGCTAAGGTCATCGATTCAACTCCAAAGGGGCCTAAATCCATGTCGGTCATCGCGGGATCTTGCGGTTACATTGCTCCAGAGTATGCTTATACACTTCGAGTAAACGAAAAAAGCGACATATACAGTTTCGGAGTGGTGATCCTCGAGCTAATAACAGGGAGACTCCCAATCGATCCAGAGTTCGGGGAGAAAGACTTGGTGAAGTGGGTGTGTTTCACATTAGATCAAGACGGGATCGATCAAGTGATCGACCCTAAACTAGATAGTTGTTTCAAGGAAGAAATTTGCAGAGTCCTCAACCTTGGGCTGCTATGCACCAGCCCTCTTCCCATCAACCGCCCATCAATGAGAAAAGTGGTAAAAATGCTACAAGAAGTTGGGGCAGAGAACCAATTCAAAACCAACACTAAAGATGGAAAGTTAACTCCTTATTATTACGAAGATGCCTCAGATCAGGGAAGTGTAGCATAG 3000 47.13 MLLHPLFLLLFTFLSNPSLLSLSLTQEGLYLHSIKLSLDDPDSSLRSWNDRDDTPCSWFGVSCNPQTNSVHSLDLSSTNIAGPFPSLLCRLQNLSFLSLYNNSINMSLPSVISECSTLQHLDLSQNLLTGALPSSISDLPNLRYLDLTGNNFSGDIPPSFARFRKLEVLSLVYNLLDGPLPAFLGNITSLKMLNLSYNPFSPSLIPLEFGNLTNLEVLWLTQCSLIGEIPHSLGRLKRLTDLDLALNNLHGPIPKSLMELSSVVQIELYNNSLTGDLPSGFSNLTSLRLFDASMNGLTGAIPDELCRLPLESLNLYENKFERKLPESIAKSPGLYELRLFSNRLTGELPRNLGKNSPLRWIDVSDNQFSGEIPESLCEKRELEELLMINNQFSGEIPASLGGCESLTRVRLGYNRFSGEVPAGFWGLPHVYLLELVSNSFSGGISDAIASAKNLSIFIISKNNFTGTIPAELGRLETLVKLLATDNNLNGSLPESLVNLRQLSSLDLRNNDLSGALPTGIKSWKNLNELNLANNEFSGEIPEEIGTLPVLNYLDLSGNLFSGKIPLGLQNLNLNLLNLSNNHLSGELPPFLDKGNYRNSFLGNPDLCGHLESLCNSKGEAKSEGYLWLLRSIFFLAGVVFIVGVVWFYLKYRKFKMARREIEKSKWTLMSFHKLDFSEYEILDCLDEDNIIGSGSSGKVYKVVLNNGEAVAVKKLFGGGMRKDGEKGDVEKGQVQDNGFEAEIDTLGKIRHKNIVKLWCCCVTRDYKMLVYEYMPNGSLGDLLHSSKKGLLDWPTRFKVALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARLADFGVAKVIDSTPKGPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELITGRLPIDPEFGEKDLVKWVCFTLDQDGIDQVIDPKLDSCFKEEICRVLNLGLLCTSPLPINRPSMRKVVKMLQEVGAENQFKTNTKDGKLTPYYYEDASDQGSVA 999
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 62523144 62526727 - Hsped.07g18900.1 Hepe07g1890 575285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1890 999 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524(InterPro)
Hepe07g1890 999 SMART LRR_sd22_2 91 108 - -
Hepe07g1890 999 SMART LRR_sd22_2 212 231 - -
Hepe07g1890 999 SMART LRR_sd22_2 115 141 - -
Hepe07g1890 999 SMART LRR_sd22_2 236 262 - -
Hepe07g1890 999 SMART LRR_sd22_2 499 528 - -
Hepe07g1890 999 Gene3D Transferase(Phosphotransferase) domain 1 774 992 - -
Hepe07g1890 999 Pfam Leucine Rich Repeat 189 212 IPR001611 GO:0005515(InterPro)
Hepe07g1890 999 Pfam Leucine Rich Repeat 214 236 IPR001611 GO:0005515(InterPro)
Hepe07g1890 999 Pfam Leucine Rich Repeat 382 403 IPR001611 GO:0005515(InterPro)
Hepe07g1890 999 Pfam Leucine Rich Repeat 572 591 IPR001611 GO:0005515(InterPro)
Hepe07g1890 999 Pfam Leucine Rich Repeat 358 377 IPR001611 GO:0005515(InterPro)
Hepe07g1890 999 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 24 187 - -
Hepe07g1890 999 Pfam Leucine rich repeat 500 559 IPR001611 GO:0005515(InterPro)
Hepe07g1890 999 FunFam Receptor-like protein kinase HSL1 668 773 - -
Hepe07g1890 999 FunFam Receptor-like protein kinase HSL1 309 616 - -
Hepe07g1890 999 SUPERFAMILY Protein kinase-like (PK-like) 676 966 IPR011009 -
Hepe07g1890 999 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 774 983 - -
Hepe07g1890 999 Pfam Leucine Rich repeats (2 copies) 117 158 IPR025875 -
Hepe07g1890 999 SUPERFAMILY RNI-like 277 593 - -
Hepe07g1890 999 Gene3D Ribonuclease Inhibitor 181 280 IPR032675 -
Hepe07g1890 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1890 999 Gene3D Phosphorylase Kinase; domain 1 650 773 - -
Hepe07g1890 999 SUPERFAMILY RNI-like 72 378 - -
Hepe07g1890 999 Gene3D Ribonuclease Inhibitor 310 618 IPR032675 -
Hepe07g1890 999 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Hepe07g1890 999 SMART LRR_typ_2 212 236 IPR003591 -
Hepe07g1890 999 SMART LRR_typ_2 139 162 IPR003591 -
Hepe07g1890 999 SMART LRR_typ_2 91 115 IPR003591 -
Hepe07g1890 999 SMART LRR_typ_2 499 522 IPR003591 -
Hepe07g1890 999 SMART LRR_typ_2 284 308 IPR003591 -
Hepe07g1890 999 Pfam Protein kinase domain 688 907 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1890 999 SMART serkin_6 685 952 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1890 999 ProSiteProfiles Protein kinase domain profile. 685 976 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1890 999 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Hepe07g1890 999 PANTHER RECEPTOR-LIKE PROTEIN 55 67 200 - -
Hepe07g1890 999 FunFam Leucine-rich receptor-like protein kinase family protein 205 303 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2215 Hepe-Chr1:86839893 Hepe07g1890 Hepe-Chr7:62523144 5.80e-23 dispersed
Hepe04g0325 Hepe-Chr4:49899240 Hepe07g1890 Hepe-Chr7:62523144 3.91e-56 dispersed
Hepe07g0268 Hepe-Chr7:2694704 Hepe07g1890 Hepe-Chr7:62523144 6.59e-89 dispersed
Hepe07g0583 Hepe-Chr7:6307627 Hepe07g1890 Hepe-Chr7:62523144 1.52e-92 dispersed
Hepe07g0584 Hepe-Chr7:6351894 Hepe07g1890 Hepe-Chr7:62523144 6.25e-94 dispersed
Hepe07g1890 Hepe-Chr7:62523144 Hepe10g0383 Hepe-Chr10:4209839 7.23e-83 dispersed
Hepe02g0264 Hepe-Chr2:2601834 Hepe07g1890 Hepe-Chr7:62523144 2.65e-184 transposed
Hepe02g1156 Hepe-Chr2:14349614 Hepe07g1890 Hepe-Chr7:62523144 6.04e-56 wgd
Hepe04g1879 Hepe-Chr4:73725561 Hepe07g1890 Hepe-Chr7:62523144 4.82e-165 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72967 PF00069 Pkinase 2.40E-42 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1890 - - - 0.0