Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1910 ATGGAGGAAGAAGATGCTAATTCTTGGTTAAGAAGAACCAAGTTTTCTCACACAATATGCTACCGTTTACAGTCCTTGCAATTGGGTTCCTTTCATGAGACCAATCCTGTTCTTAACAAGCAGAGGTCTCTGTCTCCGCCTCAGCAAACTAAACTCTCCGGCGCATTTAAAGATGCGCGTACCGATCAGAAGCGATTTTCAACTCCACAGCCTCAGAGGGTAGAATCCAGAAAAGAGAATGTTAAAAGTAAAAGGCTATTCAGTAAGAAAACTAAGGTGCACAATTCCTCAAAGGAAGAGAAGTTAAGAAGCAATGAAAAGTCCAAGTTCAAGAAGGAGTCTTCTTGCAGTTGGACCAAGTTTTTTCAGCACAGTGGAGGGAAGGTCACTGCTGTTGAAGCTGTAGGTGAATTCTCTGTTGACTTTTCGAAGTTGCTTTTTGGGCTTAAATTTGCTTATGGAGCTCATAGTCGGCTTTATTATGGAGTTTACAATAAAGAAGATGTTGCTGTTAAGATGATTATTTTACCGAACAATGACGAAAATCTCGCTCGTCGCTTATTAAAGCAGTTTGATAGGGAAGTATCCCTTTTATCTCGTCTCCACCATCCTAATGTTATAAAGTTGGTAGTAGCTGGTCAACAGCCACCCGCATATTGTATCATCACTGAGTATCTACCTCATGGTTCCTTGAGGGCATATCTTCACAAACTTGAAAAAAAACCTCTCCCACTGAAAAAACTGATTGCCATTGCCTTGGACATTGCTCGTGGGATGGAATACATCCACTCGCAAGGCGTCATTCATCGAGATCTCAAACCTGAGAACATTCTTATCGATCAAGACTTTTGCATAAAGATTGCTGATTTCGGTATCGCTTATGAGGAGGCACATTTTGATAAACTGGCCGATGACCCCGGAACTTATCGTTGGATGGCCCCCGAGATGATCAAACGTAAAACTTACGGACGAAAGGTTGATGTCTACAGCTTTGGACTTATCCTGTGGGCATTGGAGGCTGGAACAATCCCTTATGAGGGTATGACTCCAATCCAAGCAGCTTTTGCAGTTGTAAATAAGAAAATTAGACCGGTCATCCCGAGCCAGTGTCCTCCAGTGTTGCAGGCGGTTATCGAGCAATGCTGGTCGATGCAACCAGAGAAGAGGCCGGAGTTTTGGCAGGTGGTGAAAGTACTAGAGCAAGTTGAGAGTTCAATTGGAGAAGATGGTACATTGATGATGGGTGTAGAGCAGAAGCTAATTTGGGAAGATCACAAGAAAGGTCTAAGGCATTGGATACAAAAGCTTGGTCCTCATTCTCAGACTTCTCATACCTCCAGATCTAAATTCATATGA 1356 42.85 MEEEDANSWLRRTKFSHTICYRLQSLQLGSFHETNPVLNKQRSLSPPQQTKLSGAFKDARTDQKRFSTPQPQRVESRKENVKSKRLFSKKTKVHNSSKEEKLRSNEKSKFKKESSCSWTKFFQHSGGKVTAVEAVGEFSVDFSKLLFGLKFAYGAHSRLYYGVYNKEDVAVKMIILPNNDENLARRLLKQFDREVSLLSRLHHPNVIKLVVAGQQPPAYCIITEYLPHGSLRAYLHKLEKKPLPLKKLIAIALDIARGMEYIHSQGVIHRDLKPENILIDQDFCIKIADFGIAYEEAHFDKLADDPGTYRWMAPEMIKRKTYGRKVDVYSFGLILWALEAGTIPYEGMTPIQAAFAVVNKKIRPVIPSQCPPVLQAVIEQCWSMQPEKRPEFWQVVKVLEQVESSIGEDGTLMMGVEQKLIWEDHKKGLRHWIQKLGPHSQTSHTSRSKFI 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 62827043 62829847 + Hsped.07g19100.1 Hepe07g1910 575305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1910 451 PRINTS Tyrosine kinase catalytic domain signature 370 392 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1910 451 PRINTS Tyrosine kinase catalytic domain signature 307 317 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1910 451 PRINTS Tyrosine kinase catalytic domain signature 326 348 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1910 451 PRINTS Tyrosine kinase catalytic domain signature 223 236 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1910 451 PRINTS Tyrosine kinase catalytic domain signature 261 279 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1910 451 Gene3D Transferase(Phosphotransferase) domain 1 227 443 - -
Hepe07g1910 451 SUPERFAMILY Protein kinase-like (PK-like) 137 399 IPR011009 -
Hepe07g1910 451 SMART serkin_6 145 402 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1910 451 MobiDBLite consensus disorder prediction 92 106 - -
Hepe07g1910 451 PANTHER SERINE-THREONINE PROTEIN KINASE 88 401 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe07g1910 451 Gene3D Phosphorylase Kinase; domain 1 138 226 - -
Hepe07g1910 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1910 451 MobiDBLite consensus disorder prediction 38 56 - -
Hepe07g1910 451 MobiDBLite consensus disorder prediction 38 106 - -
Hepe07g1910 451 ProSiteProfiles Protein kinase domain profile. 145 406 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1910 451 Pfam Protein tyrosine and serine/threonine kinase 152 399 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1910 451 CDD STKc_MAP3K-like 154 399 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0891 Hepe-Chr6:56192594 Hepe07g1910 Hepe-Chr7:62827043 3.25e-74 dispersed
Hepe06g1491 Hepe-Chr6:65487371 Hepe07g1910 Hepe-Chr7:62827043 2.59e-21 dispersed
Hepe07g1910 Hepe-Chr7:62827043 Hepe08g2053 Hepe-Chr8:57646493 4.45e-88 dispersed
Hepe04g1922 Hepe-Chr4:74154937 Hepe07g1910 Hepe-Chr7:62827043 7.36e-24 wgd
Hepe04g1854 Hepe-Chr4:73514455 Hepe07g1910 Hepe-Chr7:62827043 2.28e-191 wgd
Hepe07g1910 Hepe-Chr7:62827043 Hepe08g0608 Hepe-Chr8:5332018 5.60e-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72968 PF07714 PK_Tyr_Ser-Thr 1.50E-60 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1910 - - - 0.0