Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1930 ATGAGTTGCATCTGCTTCGGTTCCTCTACTTTGGAGAAGAAACGGATCTCTACTCGTGCTGATAAGGAGTTGGACATTGACTTTCTTGAGAATGTTAAACAATTCTCCTTCAATGAATTAAGATCTGCTACAGAGGATTTCCATACGAACAATAGAATTGGACGTGGAGGTTTTGGAACTGTTTACAAGGGCATATTAAGGAACGGAGTACAAGTTGCGATAAAGAAACTTTCTATAGAGTCTAAGCAAGGGGCTCGGGAATTTTTGACAGAGATCAAAACCATTTCAAATGTCAAGCATCCAAACCTTGTTGAGTTGATTGGATGCTGTTCTCAAAAAGCTAACCGGATCTTGGTCTATGAATATCTGGAAAATAATAGTCTCGACCATGCTTTGCTAGATACTAAGAATACAAGTGCTGATTTGGACTGGGGGAAGAGGTCCTCTATTTGCATTGGTACTGCTAGGGGCATTCAATTTCTTCACGAGGAAGCTGTTCCACATATTGTACATAGAGACATCAAGGCTAGTAATATACTCCTTGATAGGAACTTCAATCCGAAAATTGGTGACTTTGGATTAGCCAAACTTTTCCCAGATGACATTACTCACATTAGCACAAGAATTGCAGGAACAACTGGTTACTTGGCTCCGGAGTATGCACTGGGAGGTCAGCTAACTTTGAAGGCTGATGTATATAGCTTTGGAGTCCTCATCCTTGAAATAGTTAGTGGTAGACGTAGCAGTACAGTTTTCGGGGGAGAAATACCAATGCTCTTGCTGGAACGGGTGTGGGAGTTATATGAAGAAGGAAAACTTTTAGATATTGTGGATTCTAGACTAGGAGATTATCCTCGTGAAAAAGTGCTTAGGTACATGAAAGTGGCTCTTTTCTGCACACAAGCAGCTGCAAATCGACGGCCAGTGATGGGTCAAGTCGTTGACATGCTTACAAAGAATATCAAGCTTAACGAGAAGCTACTTACCGCCCCGGGGTTCTATGGAAGCTTGGGGCTTAGTGACATTCCTTCTGTGAGCAAGAAGACCTCCAACACGTCCACTAGCAACGAGATGAGCTCCGCAGACGTCTCTATAACTCAAATCACCCCCAGATGA 1116 42.56 MSCICFGSSTLEKKRISTRADKELDIDFLENVKQFSFNELRSATEDFHTNNRIGRGGFGTVYKGILRNGVQVAIKKLSIESKQGAREFLTEIKTISNVKHPNLVELIGCCSQKANRILVYEYLENNSLDHALLDTKNTSADLDWGKRSSICIGTARGIQFLHEEAVPHIVHRDIKASNILLDRNFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTLKADVYSFGVLILEIVSGRRSSTVFGGEIPMLLLERVWELYEEGKLLDIVDSRLGDYPREKVLRYMKVALFCTQAAANRRPVMGQVVDMLTKNIKLNEKLLTAPGFYGSLGLSDIPSVSKKTSNTSTSNEMSSADVSITQITPR 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 63081193 63090080 + Hsped.07g19300.1 Hepe07g1930 575325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1930 371 ProSiteProfiles Protein kinase domain profile. 47 323 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1930 371 ProSitePatterns Protein kinases ATP-binding region signature. 53 76 IPR017441 GO:0005524(InterPro)
Hepe07g1930 371 FunFam cold-responsive protein kinase 1 18 122 - -
Hepe07g1930 371 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 329 - -
Hepe07g1930 371 CDD STKc_IRAK 53 319 - -
Hepe07g1930 371 SUPERFAMILY Protein kinase-like (PK-like) 26 317 IPR011009 -
Hepe07g1930 371 Pfam Protein tyrosine and serine/threonine kinase 48 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1930 371 SMART serkin_6 47 293 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1930 371 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 29 356 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Hepe07g1930 371 MobiDBLite consensus disorder prediction 345 371 - -
Hepe07g1930 371 Gene3D Transferase(Phosphotransferase) domain 1 123 329 - -
Hepe07g1930 371 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Hepe07g1930 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0096 Hepe-Chr5:1032716 Hepe07g1930 Hepe-Chr7:63081193 9.63e-143 dispersed
Hepe06g1167 Hepe-Chr6:61043045 Hepe07g1930 Hepe-Chr7:63081193 7.84e-51 dispersed
Hepe07g0984 Hepe-Chr7:13399979 Hepe07g1930 Hepe-Chr7:63081193 1.66e-112 dispersed
Hepe07g1830 Hepe-Chr7:61087546 Hepe07g1930 Hepe-Chr7:63081193 2.31e-89 dispersed
Hepe07g1930 Hepe-Chr7:63081193 Hepe09g0428 Hepe-Chr9:3878919 8.48e-94 dispersed
Hepe02g0134 Hepe-Chr2:1493036 Hepe07g1930 Hepe-Chr7:63081193 1.12e-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72970 PF07714 PK_Tyr_Ser-Thr 5.80E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1930 - - - 0.0