Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1971 ATGGAGAAGGCGACGAGGCCACGACGGAGGAGGAGGAGGAGGAGAAGAACAGGGCTGGCTGAGGCCGGGGGGTCGACGGAGAGTCTACCGAAGGATCTATCGGCGGGGAGAGTGCCGACGGTGATCGTGGAGAGGTTTTTGGAGTTGGAGAAATCGGCGGTGTTGCGGTGGCTGCTGCAGTTCGGTGGATTTAAAGAACGGCTTCTGGTGGATATAACTTGTTCTTGGCTAAGTTCAACATCCACTTTCAAGGAGCAGCTTGTATTAGAAGACAATCTTGAAGAACATACACAAGGCTTTTCACGAGATACAATCACATCAACAAATTCCATTAAAGACCCTGCAACCATAATTTCCAATTCCAGTTCCTTCGAGTTGGGATTCTTCACACCTCCCAACTCTACGAACCGATATGTTGGAATTTGGTTCAATCAAATTTCTCCACAAACTGTAGTATGGGTGGCCAATACAGACAACCCTCTCAACGACACTTCTGGGATTTTCACCATTTCACAGGATGGAAATCTTGTCGTCTTAGATGGAAACAACACCGTCCTTTGGTCTTCAAACGTTTCTTCTTCTTCTTCTAGGACCAACACAAGCGCCCGAATTTTAGAATCGGGTAACCTCATTTTGGAAGATACATCTTCCAGGGTGATAATATGGGAGAGTTTCAAACACCCTTCTGATAAATTCTTGCCTTCCATGAAACTTGCAACAAACACAAGAACCAAAGAGAAATTGGAGATTACCTCATGGAACACCCCTTCCGATCCATCTACGGGTAAATTTTCTTTAACTCTGCATATTTACAATGTTCCCGAAGCTGTCATTTGGAATGAGGAACTTAACATACATTGGAGATCTGGTCCATGGGATGGTCAGACCTTTATTGGAATACCCAACATGAATTCTGTTTATCTCTTTGGATTTAACCTCGTAATCGAAGACCAAACTTACACTCTCTCTGTTGCGTATAATAGTGATGCTCCACTATTTGCTTACATGGTTTTGAGTTCACAAGGGAATGTGGAGCGAATGGAGTGGGATTTTTCAGAGTTGCAATGGAAGCATATGTGGTATGCTCTACAAACGCAATGTGATTTCTATGGTGCTTGTGGGACATTTGGGATTTGTAATGCGAAAGCATCCCCTGTTTGCAGCTGTTTGAGAGGGTTTAAGCCAAAGCATGAACAAGAATGGAATAGAGGAAATTGGAGTGATGGGTGTGTAAGAAATACGCCTTTAAAGTGTCAGAAGTTGAACAACACAGCCAGTACTGAAGAAGATGGGTTTATTAAAATGGAAATGGTTAAAGTTCCTTTTTTGGCAGAGTGGTCTAATTCCTCTGTTTCAGTAGATGATTGCAGACGCGAGTGCTTCGATAATTGTTCATGTAATGCATATGCATTTCAAAATAGTATTGGTTGCATGCTATGGGGAAATAACTTGATTGATATACAAAAGTTTGAGAGCGGTGGAGCTGATCTTTATCTTCGATTGGCGTATGCAGATTTAGCTACAAATCATCTAAAGGAAAATAAAGGAATTATCATAGCCATAGTGCTACCAATGCTTATTGTGTTCATCATTCTCATATATTTCTTATGGTGGAGATGGAAGACTCACAAACACGCAAAAGAGAAAAAGATTATAGTGTCAAGCAAAAAGGAGAAGGTTTTGAAGCTGAAAAAGAATGATATAATTGACGATGAAATTAAACTTGAGGAGCTTCCTCTTTATGATTTTGAGAAACTAGAAACCGCAACGAACAACTTTGACTTATGTCACAAGCTTGGACAGGGTGGCTTTGGCCCAGTTTATAAGGGAAAATTATCAAATGGACAGGAAATAGCAATAAAGAGGCTTTCAAAAGCTTCTAACCAAGGGTATGAAGAATTTATTAATGAAGTGAGGGTCATTTCGAAGCTGCAACATAGAAATCTTGTGCGGCTTATTGGTTGCTGTATTGAAGGAGAAGAGCAGATGTTAATTTATGAATACATGCCCAACTTAAGTTTGGATGCATTCATTTTTGATTCTATCAAACAAAAACTTCTGGATTGGAGAAAAAGATTTAATATTATCGACGGAATTGCTCGCGGTCTCCTTTACCTTCATAGAGACTCAAGATTGAGAATCATCCATAGAGATCTAAAGGCAAGTAATATTCTATTAGACCCAGATTTGAATCCTAAAATCTCGGATTTTGGCATGGCAAGAATTTTTGGTGGTAATGAAGTGCAAGCCAATACTTTAAGGGTTGTTGGAACTTACGGATATATGTCTCCTGAATATGCTATGCAAGGTCGATTTTCAGAGAAGTCAGACGTATTTAGTTTTGGAGTTTTACTACTTGAGATTATAAGTGGGAGAAGGAATACAGGATTCTACAGCCACGAACATTCCTTGAGCTTATTGGAATTTGCATGGAAGTTGTGGATAGAAAACAATCTTATTCCCTTGATTGATCTAGCAATGTATGAATTATGCTATCAATCCGAGATCTTAAGGTGCATCCAAGTGGGACTCTTATGTGTTGAAGAATTTGTAAAGGATAGACCAAATGTCTCCACCATTATTTCAATGCTCAACAGTGAAATCATAGATCTTCCTATGCCAAAACAACCTAGCTTTATTGGTAGACAACTTGAGACTAGCACAAAAACATCTCAACAATGTCGAGATAACAATTCTGTAAATAATGTTACACTTACCACAGTAATTGGCCGGTAG 2736 39.84 MEKATRPRRRRRRRRRTGLAEAGGSTESLPKDLSAGRVPTVIVERFLELEKSAVLRWLLQFGGFKERLLVDITCSWLSSTSTFKEQLVLEDNLEEHTQGFSRDTITSTNSIKDPATIISNSSSFELGFFTPPNSTNRYVGIWFNQISPQTVVWVANTDNPLNDTSGIFTISQDGNLVVLDGNNTVLWSSNVSSSSSRTNTSARILESGNLILEDTSSRVIIWESFKHPSDKFLPSMKLATNTRTKEKLEITSWNTPSDPSTGKFSLTLHIYNVPEAVIWNEELNIHWRSGPWDGQTFIGIPNMNSVYLFGFNLVIEDQTYTLSVAYNSDAPLFAYMVLSSQGNVERMEWDFSELQWKHMWYALQTQCDFYGACGTFGICNAKASPVCSCLRGFKPKHEQEWNRGNWSDGCVRNTPLKCQKLNNTASTEEDGFIKMEMVKVPFLAEWSNSSVSVDDCRRECFDNCSCNAYAFQNSIGCMLWGNNLIDIQKFESGGADLYLRLAYADLATNHLKENKGIIIAIVLPMLIVFIILIYFLWWRWKTHKHAKEKKIIVSSKKEKVLKLKKNDIIDDEIKLEELPLYDFEKLETATNNFDLCHKLGQGGFGPVYKGKLSNGQEIAIKRLSKASNQGYEEFINEVRVISKLQHRNLVRLIGCCIEGEEQMLIYEYMPNLSLDAFIFDSIKQKLLDWRKRFNIIDGIARGLLYLHRDSRLRIIHRDLKASNILLDPDLNPKISDFGMARIFGGNEVQANTLRVVGTYGYMSPEYAMQGRFSEKSDVFSFGVLLLEIISGRRNTGFYSHEHSLSLLEFAWKLWIENNLIPLIDLAMYELCYQSEILRCIQVGLLCVEEFVKDRPNVSTIISMLNSEIIDLPMPKQPSFIGRQLETSTKTSQQCRDNNSVNNVTLTTVIGR 911
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 63673465 63685934 - Hsped.07g19710.1 Hepe07g1971 575366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1971 911 SUPERFAMILY Protein kinase-like (PK-like) 578 891 IPR011009 -
Hepe07g1971 911 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 669 872 - -
Hepe07g1971 911 Gene3D Phosphorylase Kinase; domain 1 569 668 - -
Hepe07g1971 911 ProSiteProfiles Bulb-type lectin domain profile. 102 225 IPR001480 -
Hepe07g1971 911 Pfam Protein tyrosine and serine/threonine kinase 595 800 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1971 911 MobiDBLite consensus disorder prediction 1 31 - -
Hepe07g1971 911 SMART serkin_6 593 869 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1971 911 CDD STKc_IRAK 599 865 - -
Hepe07g1971 911 Pfam Domain of unknown function (DUF3403) 866 911 IPR021820 GO:0004674(InterPro)
Hepe07g1971 911 SMART blect_4 108 228 IPR001480 -
Hepe07g1971 911 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 556 668 - -
Hepe07g1971 911 SUPERFAMILY alpha-D-mannose-specific plant lectins 151 259 IPR036426 -
Hepe07g1971 911 Gene3D - 99 226 IPR036426 -
Hepe07g1971 911 CDD PAN_AP_plant 414 502 - -
Hepe07g1971 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1971 911 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 98 225 - -
Hepe07g1971 911 CDD B_lectin 108 228 IPR001480 -
Hepe07g1971 911 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 102 877 - -
Hepe07g1971 911 SMART ntp_6 427 501 IPR003609 -
Hepe07g1971 911 ProSiteProfiles Protein kinase domain profile. 593 869 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1971 911 Pfam S-locus glycoprotein domain 287 396 IPR000858 GO:0048544(InterPro)
Hepe07g1971 911 PIRSF SRK 87 911 IPR024171 GO:0004674(InterPro)
Hepe07g1971 911 Pfam D-mannose binding lectin 150 253 IPR001480 -
Hepe07g1971 911 Gene3D Transferase(Phosphotransferase) domain 1 669 871 - -
Hepe07g1971 911 ProSiteProfiles PAN/Apple domain profile. 418 502 IPR003609 -
Hepe07g1971 911 MobiDBLite consensus disorder prediction 1 17 - -
Hepe07g1971 911 Pfam PAN-like domain 427 487 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1214 Hepe-Chr2:15237505 Hepe07g1971 Hepe-Chr7:63673465 3.62e-19 dispersed
Hepe07g1971 Hepe-Chr7:63673465 Hepe07g1973 Hepe-Chr7:63690647 0.0 dispersed
Hepe08g0139 Hepe-Chr8:1159025 Hepe07g1971 Hepe-Chr7:63673465 6.07e-15 dispersed
Hepe07g1971 Hepe-Chr7:63673465 Hepe07g1972 Hepe-Chr7:63687240 0.0 tandem
Hepe07g2389 Hepe-Chr7:68230461 Hepe07g1971 Hepe-Chr7:63673465 2.60e-95 transposed
Hepe01g1334 Hepe-Chr1:78518100 Hepe07g1971 Hepe-Chr7:63673465 3.77e-208 wgd
Hepe02g0179 Hepe-Chr2:1875878 Hepe07g1971 Hepe-Chr7:63673465 5.42e-139 wgd
Hepe04g1802 Hepe-Chr4:72967135 Hepe07g1971 Hepe-Chr7:63673465 1.06e-134 wgd
Hepe07g1971 Hepe-Chr7:63673465 Hepe08g0498 Hepe-Chr8:4359002 6.18e-117 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72972 PF07714 PK_Tyr_Ser-Thr 6.50E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1971 - - - 0.0