Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1972 ATGAAACCCCAAATGAATCATTGGAGCTTTTCAGGTCGTCTTCTTCTTCTTGTTCTTTCATTTACATACTTCTTTTCACAGTTTTGCTTTGGCAGTGATACGATAACATCAACAGATTTCATCAAACACCCTGCAACTATAATTTCCAATGGCAGTTCCTTCGAGTTGGGATTCTTCTCTCCTGTTAATTCCACAGGCCAATATGTCGGAATTTGGTTCAAGCAAGTTTCTCTACAAACTGTAGTATGGGTTGCAAACAAAGACAGCCCTCTCAACAATACTTCAGACGGGATTTTCACTATTTCCAAGGATGGAAATCTTGTGGTCTTAGATGGAAACAACACCATCCTTTGGTCTACAAATGTCACTTCTCCTACCGTCAACACAACTGCTCGAATTCTAGATTCGGGCAACCTTGTTTTGTCAGATAGTTCTTCTGGGTTGATTATATGGGAGAGTTTCAAAGACCCTTCCAATTTATTCTTGCCTTCCATGGAACTTATCACAAACAGAAGAACTAAGGAGCAGCTCGAGGTTACTTCATGGAAAACCTCTTCCGATCCATCAACGGGTAACTTTTCTTTAGCCTTGGATGTTCTCAGTATCCCTGAAGCTGTCGTTTCGAATGGTGGTACCCCATATTGGAGGTCCGGTCCATGGAATGGTCAGACGTTTATCGGAGTACCTGAAATGATTTCTGTGTATCTCATTGGATTTAATCTTGCAATTCAAGACCAAACTTATCATTTCTCTATTTCTTATAACAATGCCAATCAATTAGTCAATACCATGATATTAAGCCCAGAAGGGAATCTGGAGCAAGAGTATTGGGATTTTTCGGAAGAAAGTTGGGTGGTGATTTGGTCGGCTCTTAAATCCAAGTGTGATTTCTACGGTGCTTGTGGGCCGTTTGGGATTTGTAATGCAAATGCATCCCCTGTTTGCAGCTGTTTAAAAGGGTATAAACCAAAGTTTGAATCGGAGTGGAATCGAGGAAATTGGAGTAATGGGTGCGTGAGAAATACGCCATTGCAGTGCGAGAACAAGTCCAACAACACCAACACCAACACCAGCAGCAGCGCTAATGAGGAAGATGGATTTTTAAAACTGGAATTGGTTAAAGTTCCATTTTTGGCAGAGTGGTCGATTTCCTCTACTTCAGCGGATGATTGCAAACTCGAGTGCTTGGAGAATTGCTCGTGTAGTGCTTATGCATTTGAAAATGGTATTGGTTGTATGATATGGAGAAGTGATTTAATTGATATACAGAAGTTTGAAGGCCTTGGAGCTGATCTTTATCTTCGATTGGCATATACAGACTTAGTCACAAATGATATAAAAAACAAGACAGGAATTATTATAGCCATAGTGCTACCAGCTGCAACGCTTATCATCTTCATCATTGCTATATACTTCTGGTGGAGATGGAAGGCTCGCAAAAAAGGTAACAGAAATTTGAAGTACTTGAGAAGGGATGATACGATTGGGGACCAAAGTAAATTTGAAGAACTACCTGTTTATGATTTTGAGAAGCTGGAAATTGCAACAAACAGTTTTGATTTAAGAAACAAACTTGGACAAGGTGGCTTTGGTCCCGTATATAAGGGAAGATTGTTAGATGGACAGGAAATCGCGATAAAGAGGCTTTCAAGAGCTTCTAATCAAGGGTATGAAGAATTTTTAAATGAAGTGGTGGTCATTTCAAAACTACAACATAGAAATCTTGTTCAACTTCTTGGTTGCTGCATTGAAAGAGAAGAGAAGATGCTAATATATGAGTATATGCCCAACTTAAGTTTGGATGTACTGATCTTTGATTCCATCAAACAAGAACTCTTGGATTGGAGAAAAAGATTTAATATTATTGATGGAATTGCTCGGGGTCTCCTTTACCTTCATAGAGATTCAAGATTGAGAATCATTCATCGAGATTTAAAGGCAAGTAATATTCTATTAGACAAAGATATGAATCCCAAAATCTCAGACTTCGGAATGGCAAGAATTTTTGGTGGTAATGAAGTGCAAGCCAATACTGTAAGGGTTGTTGGAACATATGGATATATGTCACCTGAATATGCAATGCAAGGTCAATTCTCAGAGAAATCAGATGTTTTTAGTTTTGGAGTTTTATTGCTCGAGATTATAAGTGGGAGAAGGAACACGGGGTTCTATCGTCATGAACATGCTTTAAGCTTAGTGGAATTTGCATGGAAGTTCTGGATGGAAGAAAATCTTGTTCCTTTGATTGATCCAACAATATACCAATTGTGTTGGCAATCAGAGATTTTGAGGTGCATCCAAGTGGGACTCTTATGTGTTGAAGAATCTATAGATGATAGGCCAAATATTTTGACCATTATTTCAATGCTCAACAGTGAAATTGTAGATCTTCCAATTCCAAAGCAGCCTAGCTTTATTGGTAGACCAGCTCAGAGCAACACAAATATCTCTCAACAATCTCTAAATAAATATTCTGTAAATAGACTTACACTTACCTCAGTTATAGGTCGATAA 2514 38.58 MKPQMNHWSFSGRLLLLVLSFTYFFSQFCFGSDTITSTDFIKHPATIISNGSSFELGFFSPVNSTGQYVGIWFKQVSLQTVVWVANKDSPLNNTSDGIFTISKDGNLVVLDGNNTILWSTNVTSPTVNTTARILDSGNLVLSDSSSGLIIWESFKDPSNLFLPSMELITNRRTKEQLEVTSWKTSSDPSTGNFSLALDVLSIPEAVVSNGGTPYWRSGPWNGQTFIGVPEMISVYLIGFNLAIQDQTYHFSISYNNANQLVNTMILSPEGNLEQEYWDFSEESWVVIWSALKSKCDFYGACGPFGICNANASPVCSCLKGYKPKFESEWNRGNWSNGCVRNTPLQCENKSNNTNTNTSSSANEEDGFLKLELVKVPFLAEWSISSTSADDCKLECLENCSCSAYAFENGIGCMIWRSDLIDIQKFEGLGADLYLRLAYTDLVTNDIKNKTGIIIAIVLPAATLIIFIIAIYFWWRWKARKKGNRNLKYLRRDDTIGDQSKFEELPVYDFEKLEIATNSFDLRNKLGQGGFGPVYKGRLLDGQEIAIKRLSRASNQGYEEFLNEVVVISKLQHRNLVQLLGCCIEREEKMLIYEYMPNLSLDVLIFDSIKQELLDWRKRFNIIDGIARGLLYLHRDSRLRIIHRDLKASNILLDKDMNPKISDFGMARIFGGNEVQANTVRVVGTYGYMSPEYAMQGQFSEKSDVFSFGVLLLEIISGRRNTGFYRHEHALSLVEFAWKFWMEENLVPLIDPTIYQLCWQSEILRCIQVGLLCVEESIDDRPNILTIISMLNSEIVDLPIPKQPSFIGRPAQSNTNISQQSLNKYSVNRLTLTSVIGR 837
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 63687240 63690219 - Hsped.07g19720.1 Hepe07g1972 575367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1972 837 SMART serkin_6 519 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1972 837 CDD B_lectin 46 157 IPR001480 -
Hepe07g1972 837 PIRSF SRK 5 837 IPR024171 GO:0004674(InterPro)
Hepe07g1972 837 Gene3D - 29 155 IPR036426 -
Hepe07g1972 837 ProSiteProfiles PAN/Apple domain profile. 346 437 IPR003609 -
Hepe07g1972 837 Pfam S-locus glycoprotein domain 215 325 IPR000858 GO:0048544(InterPro)
Hepe07g1972 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 798 - -
Hepe07g1972 837 Pfam D-mannose binding lectin 80 183 IPR001480 -
Hepe07g1972 837 SMART ntp_6 362 436 IPR003609 -
Hepe07g1972 837 CDD PAN_AP_plant 342 437 - -
Hepe07g1972 837 Gene3D Phosphorylase Kinase; domain 1 494 594 - -
Hepe07g1972 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 221 IPR036426 -
Hepe07g1972 837 SUPERFAMILY Protein kinase-like (PK-like) 503 817 IPR011009 -
Hepe07g1972 837 Gene3D Transferase(Phosphotransferase) domain 1 595 796 - -
Hepe07g1972 837 Pfam Protein tyrosine and serine/threonine kinase 521 760 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1972 837 ProSiteProfiles Bulb-type lectin domain profile. 32 154 IPR001480 -
Hepe07g1972 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1972 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 483 594 - -
Hepe07g1972 837 CDD STKc_IRAK 525 791 - -
Hepe07g1972 837 ProSiteProfiles Protein kinase domain profile. 519 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1972 837 SMART blect_4 38 157 IPR001480 -
Hepe07g1972 837 Pfam PAN-like domain 362 422 IPR003609 -
Hepe07g1972 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 154 - -
Hepe07g1972 837 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 803 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0179 Hepe-Chr2:1875878 Hepe07g1972 Hepe-Chr7:63687240 9.27e-151 dispersed
Hepe07g1011 Hepe-Chr7:14272084 Hepe07g1972 Hepe-Chr7:63687240 2.20e-11 dispersed
Hepe07g1390 Hepe-Chr7:45852904 Hepe07g1972 Hepe-Chr7:63687240 2.06e-11 dispersed
Hepe07g1972 Hepe-Chr7:63687240 Hepe07g1974 Hepe-Chr7:63703114 4.94e-205 dispersed
Hepe07g1971 Hepe-Chr7:63673465 Hepe07g1972 Hepe-Chr7:63687240 0.0 tandem
Hepe07g1972 Hepe-Chr7:63687240 Hepe07g1973 Hepe-Chr7:63690647 0.0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72973 PF07714 PK_Tyr_Ser-Thr 3.10E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1972 - - - 0.0