Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1973 ATGAAATCCAAAAGGGGTTGTAGTTCTTCAACTTCTCGTCTTCTTCTACTTCTTTCTCTTACATTCTTCTGTTCAAGATTTTCCTTTTGCAGAGATACAATCACATCATCGAATTTCATCAAAGACCCTGCAACTATAATTTCGAATGCCACTTCCTTTGAGTTAGGGTTCTTCACACCTCCTAATTCCACCAACCGATATGTCGGAATTTGGTTCAAACAACAAATTTCTGTACAAATGGTCGTATGGGTAGCCAACAGAGATAACCCTCTCAACAATACTTCTGGGATTTTCACTATTTCCAAGGATGGAAATCTTGTCGTCTTAGATGGAAACAACGCCATTCTTTGGTCTTCAAATGTCCCTGCTTCTTCTTCTTCTACAATCAACAACACAATCGCCCGGATTTTAGATACTGGTAACCTCGTTTTGGAAGATATTGCTTCCGGTGTCATTATATGGGAGAGTTTCAAACACCCTTCTCATTCATACTTGCCTTCCATGGCATTCCTCACAAACACAAGAACCCATCAGGAAATCGGGCTTACTTCATGGAGAAGCCCTTCTGATCCATCTATAGGTAACTTTTCTTTAACATTGTATGTTTATAACATTCCTGAAACTGTTATTTGGAATGGGCGTAACCCATTTTGGAGATCTGGTCCATGGAATGGTCAGACTTTTATTGGAATGCCTGAAATGAAATCTGTTTATCTCTCTGGGAATAGCCTTGTTATTGAAGATCAAACTTATCGTCTCACTAATGGCCAACAATCCATGTACATATTTTTAAGCCCACGAGGGAATGTGGAGAGGAAGGGGTGGGATTCTTCGAAGGAGCAATGGAAGGTTATTTGGTCAGCTCCACAAAGGGAGTGTGATTACTATGGTGCTTGTGGGGCATTTGGGATTTGTGATGCTAAAGCATCTCCTATTTGCAGCTGTTCAAAAGGGTTTAAGCCAAAGCAGGAAAGGGAATGGAATCGAGGGAATTGGAGTGGTGGGTGTGTGAGAAATACGCCATTGAAGTGTGAGAATTCGAAGTTGAACAATACAAGCACTGAGGAAGAAGATGGATTTTTGAAGTTGGAAATGGTTAAAGTGCCATTTTATGCAGAGTGGTCTAATTCCTCTGCTTCAGTAGATGATTGTAGACTCGAGTGTTTGAAGAATTGTTCTTGTAGTGCTTATGCATATGAGAATGGTATTCATTGCATGTTATGGAGAATAGACTTAATTGATGTAAAGAAGTTTGAGAGCGGTGGAGCTGATCTGTACATTCGAATGGCACATGCAGACTTGGATATAGATGATGTAAAAGTAAAGGATAATGTAAAAGACAAGAAAGGAATCATAATAGCCATGGTGATACCAGGAATGTTTATCTTCATCATTGCCATATACTTCGGGTGGAGATGGAAGACTCACAAACACGTGAAGAAAAACGGAAGCAAGAACATGTCATTGTTCAACTTGACGACGCATCATAGATTTGGAGACAATTTGAGCAAAGAGTTACTGACTTATGACTTTGAGAAGCTAGACATTGCGACGAATCATTTTCATTTAGATAACAAACTTGGAGAGGGTGGATTCGGCTCGGTGTATAAGGGGAGATTGGCGGATGGACAGGAAATAGCTGTAAAAAGACTTTCAAGAGTCTCTAATCAAGGGGTCGAAGAATTTTTAAATGAAGTGATAGTAATTTCAAAACTCCAACATCGAAATCTTGTTCGGCTTATTGGTTGCTGCGTTGAAGGTGAAGAAAAGATGTTGATATATGAACACATGTCAAACCAAAGTTTGGATGCTTTTATCTTTGATTCCTCCAAACAAAAACTCTTAGATTGGAGGAAAAGGTTCAACATCATTATGGGAATTGCACGAGGCCTCCTTTACCTTCACAAAGATTCTAGATTGAAGATTATCCATAGAGATTTAAAAGCAAGCAACATTCTATTGGACGAAAATTTTAATCCCAAAATTTCAGATTTTGGTATGGCACGAATTTTTGGCAACAATGAGGATCAAGCAAAAACTTTAAGAGTCGTTGGAACTTATGGCTACATGTCTCCCGAATATGCAATGCAAGGTCGATTCTCAGAGAAATCAGACGTCTTCAGTTTTGGAGTTTTGTTGCTTGAAATTATTAGTGGGAGAAAAAATACAAGTTTTGAGCATGATGAGGATGTCATAAGCCTATTAGGACTGGCATGGAAATTATGGAACGAAGATAATCTAGTTTCTTTGATTGATCAAGTAATCCTCGACTCGAGCCATCACACAGAGATTTTGAGATGCATCCATATAGGACTCTTGTGCGTTCAAGAAGCCGTGAAGGATAGGCCAGATATGTTAACCATTCTTTCCATGCTTAATAGTGAGATTATAGATCTTTATCCTCCAAAACAACCTGGTTTTATAAGCATCCAATTTGAGGGCGATACAAATTTAGCTCAACATAGTCAGGGTAAACATTCTGTAAATATGGTTACAATTTCCAAGATTGTGGGACGGTAG 2520 38.93 MKSKRGCSSSTSRLLLLLSLTFFCSRFSFCRDTITSSNFIKDPATIISNATSFELGFFTPPNSTNRYVGIWFKQQISVQMVVWVANRDNPLNNTSGIFTISKDGNLVVLDGNNAILWSSNVPASSSSTINNTIARILDTGNLVLEDIASGVIIWESFKHPSHSYLPSMAFLTNTRTHQEIGLTSWRSPSDPSIGNFSLTLYVYNIPETVIWNGRNPFWRSGPWNGQTFIGMPEMKSVYLSGNSLVIEDQTYRLTNGQQSMYIFLSPRGNVERKGWDSSKEQWKVIWSAPQRECDYYGACGAFGICDAKASPICSCSKGFKPKQEREWNRGNWSGGCVRNTPLKCENSKLNNTSTEEEDGFLKLEMVKVPFYAEWSNSSASVDDCRLECLKNCSCSAYAYENGIHCMLWRIDLIDVKKFESGGADLYIRMAHADLDIDDVKVKDNVKDKKGIIIAMVIPGMFIFIIAIYFGWRWKTHKHVKKNGSKNMSLFNLTTHHRFGDNLSKELLTYDFEKLDIATNHFHLDNKLGEGGFGSVYKGRLADGQEIAVKRLSRVSNQGVEEFLNEVIVISKLQHRNLVRLIGCCVEGEEKMLIYEHMSNQSLDAFIFDSSKQKLLDWRKRFNIIMGIARGLLYLHKDSRLKIIHRDLKASNILLDENFNPKISDFGMARIFGNNEDQAKTLRVVGTYGYMSPEYAMQGRFSEKSDVFSFGVLLLEIISGRKNTSFEHDEDVISLLGLAWKLWNEDNLVSLIDQVILDSSHHTEILRCIHIGLLCVQEAVKDRPDMLTILSMLNSEIIDLYPPKQPGFISIQFEGDTNLAQHSQGKHSVNMVTISKIVGR 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 63690647 63694037 - Hsped.07g19730.1 Hepe07g1973 575368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1973 839 SUPERFAMILY Protein kinase-like (PK-like) 505 792 IPR011009 -
Hepe07g1973 839 CDD B_lectin 37 160 IPR001480 -
Hepe07g1973 839 ProSiteProfiles Bulb-type lectin domain profile. 31 157 IPR001480 -
Hepe07g1973 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 597 800 - -
Hepe07g1973 839 SMART blect_4 37 160 IPR001480 -
Hepe07g1973 839 Pfam D-mannose binding lectin 81 186 IPR001480 -
Hepe07g1973 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1973 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 157 - -
Hepe07g1973 839 Gene3D Transferase(Phosphotransferase) domain 1 597 798 - -
Hepe07g1973 839 PIRSF SRK 6 839 IPR024171 GO:0004674(InterPro)
Hepe07g1973 839 Gene3D - 27 158 IPR036426 -
Hepe07g1973 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 191 IPR036426 -
Hepe07g1973 839 CDD STKc_IRAK 527 793 - -
Hepe07g1973 839 ProSiteProfiles PAN/Apple domain profile. 344 430 IPR003609 -
Hepe07g1973 839 Gene3D Phosphorylase Kinase; domain 1 483 596 - -
Hepe07g1973 839 SMART serkin_6 521 797 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1973 839 Pfam S-locus glycoprotein domain 218 322 IPR000858 GO:0048544(InterPro)
Hepe07g1973 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 484 596 - -
Hepe07g1973 839 ProSiteProfiles Protein kinase domain profile. 521 797 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1973 839 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524(InterPro)
Hepe07g1973 839 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 807 - -
Hepe07g1973 839 Pfam PAN-like domain 354 415 IPR003609 -
Hepe07g1973 839 CDD PAN_AP_plant 340 430 - -
Hepe07g1973 839 Pfam Protein tyrosine and serine/threonine kinase 522 756 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1973 839 SMART ntp_6 355 429 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1802 Hepe-Chr4:72967135 Hepe07g1973 Hepe-Chr7:63690647 5.97e-145 dispersed
Hepe07g1971 Hepe-Chr7:63673465 Hepe07g1973 Hepe-Chr7:63690647 0.0 dispersed
Hepe07g1973 Hepe-Chr7:63690647 Hepe07g1978 Hepe-Chr7:63767820 1.77e-217 dispersed
Hepe07g1972 Hepe-Chr7:63687240 Hepe07g1973 Hepe-Chr7:63690647 0.0 tandem
Hepe07g1973 Hepe-Chr7:63690647 Hepe07g1974 Hepe-Chr7:63703114 5.86e-199 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72974 PF07714 PK_Tyr_Ser-Thr 1.40E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1973 - - - 0.0