Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1999 ATGGCTGCAACGAGCCCAAAACTCAATTACTTCTTTAAGATGCTCAATTTTGTTACTTTCTTCTTCCTCCTCCTCAGTTTCCTTATCTATGGAAACGCTCAGACCCCTGTTTCTTACCCGTATCGCGCATGCTTATCCACCAATTTCACTCAGAATAGCACCTACCAGTCAAATCTCAATCTTCTCTTCTCAAATCTCTCCGCCAACGGCCCCGCAAGAAACAGATTCTTCAATACTTCCGTTGGCCGACCACCAAACGACGCCGTTTACGGTCTCTTCCAGTGTCGTGGAGACGTCACCGACAGATTGTGTCGAAATTGCTTGGCCACCGCTACCAGAGACATCGCCCGGCTGTACTGTCCCTTGAGTAAAGGCGCTGTGATTTGGTACGATGAATGCATCGTCCGCTATTCCGACCAACCTTTCTTTTCCACCGTCACCACAGAGCCAAATTTGCAATTACTGAATTCGGCCGATATAGACGTCGACATGGCTCGATTCAACAACCTAATCATGTCTACACTGAGAGCCACCGCGGCTCGGGCGTCCAACGCGTCTTCGGTGGGCGAATTGTTTGCAACCCAGGAGGCTAATTTCACTACAGATCTAAATCTTTACACATTAGCTCAGTGTACCGGCGATTTGGCAAATTCCGATTGCCAAGATTGCTTAACACAAGCAATCCGTTCTATTCCGAGTTGTTGTACTAATAAACGAGGTGGGAGAGTTCTGCTTCCTAGCTGTTACGTTCGTTACGAAGTTTACATGTTTTACGAAGACACGCAAACGAATTCTGTACCGCCTCCGGCAACTCCCACGCCCAATTCCACAACTCCACCGCCGCCACCTCTTCGTCCTTCTTTTCCTCCACCGGGGGAAAGAAGATCCTCAATGGTGTTAATTGTGGCCATTGTGGCTCCGATTACTGTCTCCATCCTGCTTTTTGTTGTGGGTTGCTGTTTCCTGCGCCGAAGAGCGAAGAGGAGACACTCTGCTGTAGAGGAAGATAGTGTTGTTAACGAGATGACCACTGTAGAATCTCTGCAATTTGATTTCAAAACAATCGATGCTGCTACTAACAAATTCTCAGAGGAAAACAAGTTGGGAGAAGGCGGATTTGGTGCAGTCTACAAGGGCACTCTTGATAATGGACAAGAGATAGCAGTCAAAAGATTGTCAAGAGGATCTTTACAAGGTGCAGAAGAGTTCAAGAATGAAGTTATGTTGGTTGTTAAGCTTCAACATAGAAATCTAGTGAGACTATTGGGATTCTGCTTGGAGGGTGAAGAAAAGATACTCATCTATGAATACATTCCCAACAAAAGCCTTGACTTTTTCTTATTTGATCTAGAGGGACAGAGACGGTTGGATTGGTTGAAACGATATAAGATCATCAACGGGATTGCTCGTGGAATATTATATCTGCATGAAGATTCTCGTCTTCGAATTATTCACCGTGATCTTAAAGCGAGTAACATCTTGTTAGATGGAGATATGAATGCAAAAATTTCTGACTTTGGCATGGCAAGAATTATTCAAGTGGATCAAACTCAAGGAAATACGAGTAGGATTGTTGGTACCTACGGCTACATGTCTCCCGAATATGCAATGCATGGAAACTTCTCTATGAAATCCGATGTGTATAGCTTCGGAGTCTTAGTCTTGGAGATTTTAAGTGGCAAGAAAAACAACACCTTTTACTTGTCGGATCTTGCCGAAGACATTCTGACCTATGCTTGGAAACTATGGAAGGATGGAACGCCATTAGAATTATTGGACGTGAGTCTGAGAGATAGCTACTCAAGAAATGAGGTGCTTAGATGCATTCATATTGCTTTATTATGTGTTCAGGAGGATCCTAGCAGTAGACCTTCCATGGCATCCATTGTTCTTATGCTTAATAGTTATTCGATTACTTTGTCATTGCCGGAAGAGCCAGCATTCTTCTTGCGCAGTAAAGACAATGGCATTATAATAGATAGTGATCAATCTACGAGTAAGTCTATCCCGTGGTCTGCCAATGAAACATCTATATCTGAGTTGCATCCACGATAA 2055 43.99 MAATSPKLNYFFKMLNFVTFFFLLLSFLIYGNAQTPVSYPYRACLSTNFTQNSTYQSNLNLLFSNLSANGPARNRFFNTSVGRPPNDAVYGLFQCRGDVTDRLCRNCLATATRDIARLYCPLSKGAVIWYDECIVRYSDQPFFSTVTTEPNLQLLNSADIDVDMARFNNLIMSTLRATAARASNASSVGELFATQEANFTTDLNLYTLAQCTGDLANSDCQDCLTQAIRSIPSCCTNKRGGRVLLPSCYVRYEVYMFYEDTQTNSVPPPATPTPNSTTPPPPPLRPSFPPPGERRSSMVLIVAIVAPITVSILLFVVGCCFLRRRAKRRHSAVEEDSVVNEMTTVESLQFDFKTIDAATNKFSEENKLGEGGFGAVYKGTLDNGQEIAVKRLSRGSLQGAEEFKNEVMLVVKLQHRNLVRLLGFCLEGEEKILIYEYIPNKSLDFFLFDLEGQRRLDWLKRYKIINGIARGILYLHEDSRLRIIHRDLKASNILLDGDMNAKISDFGMARIIQVDQTQGNTSRIVGTYGYMSPEYAMHGNFSMKSDVYSFGVLVLEILSGKKNNTFYLSDLAEDILTYAWKLWKDGTPLELLDVSLRDSYSRNEVLRCIHIALLCVQEDPSSRPSMASIVLMLNSYSITLSLPEEPAFFLRSKDNGIIIDSDQSTSKSIPWSANETSISELHPR 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 64049993 64053002 - Hsped.07g19990.1 Hepe07g1999 575394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1999 684 Gene3D Phosphorylase Kinase; domain 1 323 437 - -
Hepe07g1999 684 Pfam Protein tyrosine and serine/threonine kinase 365 631 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1999 684 SMART serkin_6 362 637 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1999 684 MobiDBLite consensus disorder prediction 267 290 - -
Hepe07g1999 684 ProSiteProfiles Gnk2-homologous domain profile. 148 257 IPR002902 -
Hepe07g1999 684 CDD STKc_IRAK 368 634 - -
Hepe07g1999 684 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524(InterPro)
Hepe07g1999 684 FunFam Cysteine-rich receptor-like protein kinase 10 151 257 - -
Hepe07g1999 684 ProSiteProfiles Gnk2-homologous domain profile. 37 142 IPR002902 -
Hepe07g1999 684 FunFam Cysteine-rich receptor-like protein kinase 10 323 437 - -
Hepe07g1999 684 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 37 142 - -
Hepe07g1999 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1999 684 Gene3D Transferase(Phosphotransferase) domain 1 438 642 - -
Hepe07g1999 684 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 161 649 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Hepe07g1999 684 Pfam Salt stress response/antifungal 169 254 IPR002902 -
Hepe07g1999 684 Pfam Salt stress response/antifungal 44 140 IPR002902 -
Hepe07g1999 684 FunFam cysteine-rich receptor-like protein kinase 10 438 640 - -
Hepe07g1999 684 SUPERFAMILY Protein kinase-like (PK-like) 347 664 IPR011009 -
Hepe07g1999 684 MobiDBLite consensus disorder prediction 263 291 - -
Hepe07g1999 684 Gene3D - 153 257 IPR038408 -
Hepe07g1999 684 Gene3D - 37 142 IPR038408 -
Hepe07g1999 684 MobiDBLite consensus disorder prediction 664 684 - -
Hepe07g1999 684 ProSiteProfiles Protein kinase domain profile. 362 637 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0189 Hepe-Chr2:1961315 Hepe07g1999 Hepe-Chr7:64049993 2.58e-37 dispersed
Hepe03g0438 Hepe-Chr3:6570430 Hepe07g1999 Hepe-Chr7:64049993 2.92e-20 dispersed
Hepe07g1347 Hepe-Chr7:44115769 Hepe07g1999 Hepe-Chr7:64049993 2.64e-151 dispersed
Hepe07g1997 Hepe-Chr7:64024310 Hepe07g1999 Hepe-Chr7:64049993 1.31e-61 dispersed
Hepe07g1999 Hepe-Chr7:64049993 Hepe07g2002 Hepe-Chr7:64117856 6.62e-249 dispersed
Hepe07g1998 Hepe-Chr7:64040358 Hepe07g1999 Hepe-Chr7:64049993 3.72e-72 tandem
Hepe07g1999 Hepe-Chr7:64049993 Hepe07g2000 Hepe-Chr7:64064169 8.36e-67 tandem
Hepe09g0496 Hepe-Chr9:4600628 Hepe07g1999 Hepe-Chr7:64049993 4.59e-08 transposed
Hepe04g1791 Hepe-Chr4:72856589 Hepe07g1999 Hepe-Chr7:64049993 3.67e-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72977 PF07714 PK_Tyr_Ser-Thr 9.60E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1999 - - - 0.0