Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2002 ATGCTCAACTTCCCCATTTTCATCTTCCTCCTCAGTTATTTCATCATCCATGCTCACGCTCAGACTCTTTACCGTTGCACACCCACCAATAATTTCACCACCAATACTCCCTTTCAGTCCAGCCTTAATCTTCTCCTTACAAATCTCTCCGCCAACGCCCCCGGAGCTAACGGATTCTTCAATTCTTCCGTCGTCGGCCGGACACCGAGCGACACCGTTTACGGCCTCTTCCAGTGCCGCGGCGACACCACCAACGGCTCCTGCAGAAACTGCGTCATGGAAGCTACCAGAACCATAGCCAGTCAGTTCTGTCCATTCAGCAAAGGCGCCGTGGTTTGGTATGACGACTGTATGCTGCGTTATTCAGACCATTTTTTGTTTTCCATGGTGTCTACTGAGCCAAGATACGGGTTAGAAAATCCCGGTAATATGGGCGTCGACACGCCTCGGTTCAACCAATTAGTGATGTCCACGTTGACATCCACGGCGGCTGACGCCTCTTTGGCGGTGGCCCAAATGTTTGCTACGGAGGAGGCAATGTTTACATGGAATACAACGCTTTACACATTGGCACAGTGCACCGCCGACTTGTCAAATTCAAATTGCCAAGATTGCTTAACGGGAGCTATTAGGGATATTCCCCGTTGCTGCGACAATAAAATTGGTGGCAGAGTTTTGTTTCCGAGCTGTTATGTTCGTTACGAAGTTTACCCGTTTTACCTAATCAATAGGACCAATATAGTACCGCCTCCAACTACGACTCTCCCGCCCAATTGGACAACTACATCAGAGGAACGCAGATTCTCGAGTGGCATAATAGTTGTAGCCATCGTAGCTCCGATTACTGTCTCCATTCTACTTTTCGTTCTGGGTTGGTATTTCCTACGTCGAAGAGGGGAAAATAAGTACACTGCTGAACATGAAGATAGTGTTGATTATGAGATCACCACTGTGGAATCTCTACAATTTGATTTCAAAACAATCGATGCTGCTACTAACAAATTCTCAGAGGAAAACAAGTTGGGAGAAGGTGGATTTGGTGCAGTCTACAAGGGTAGGCTTGAAAATGGACAAGAGATAGCAGTGAAAAGATTATCAAGAAGATCTTTACAAGGTTCTAAAGAGTTCAAGAATGAGGTCATGTTGGTTGCTAAGCTTCAACATAGAAATCTAGTGAGACTATTGGGATTCTGCTTGGAGGGTGAAGAAAAGATACTCATCTATGAATACATTGCCAACAAAAGCCTTGACTATTTCCTATTTGATCCCGAGCGACAGAGAGTGTTAGATTGGTTGAGACGATATAAGATCATCATTGGGATTGCTCGAGGAATGTTATATCTACATGAAGATTCCCGACTTCGAATTATTCATCGTGACCTTAAAGTCAGTAATATCTTGTTAGACAAAGATATGAATCCAAAGATTTCAGACTTTGGTATGGCAAAGATTATCCAGATTGATGAGAGTCAAGGAAATACAAATCGAATTGTTGGTACCTATGGTTACATGTCTCCTGAATATGCAATGCACGGAAATTTCTCTATGAAATCTGATGTGTATAGTTTCGGAGTCTTAGTGTTGGAGATTATAAGTGGCCAAAAAAACGGCAACTTTTATATGTCGGGTATTGCGGAAGACATCTTGACCTATGAAGATCCTTATTGCAGACCTTCCATGGCATCCATTGTTCTTATGCTAAATAGTGATTCTGTTACTTTGCCTTTGCCTAAAGAGCCACCGTTCTTCATGCGCATTAGAGGCAATGACTGCCGTGGGGACGTTACCGACAGCATCTGTCGAAATTGCTTGGCCACCGCTACCAAAGACACCGCCCGACAGTACTGTCCCCTGAGGAAAGGCGCAGTGATTTGGGGAAAGCAGAGTCTCAATGGTGATAATTCTGGCCATTTTGATTCTAGTTATTTTTTTGATGAGTTCACCACTGTGGAATCTCTACAATTTTATTTCAATACAATTGATGCTGCTACTAACAAATTCTCAGCAGAAAACAAGTTGGGTGAAGGTGGATTTGGTTCTGTCTACAAGGGTATACTTAATAATGGACCAGAGATAGCAGTGAAAAGACTGTCAAAAGGATCTTTGCAAGATCCTAAAAGAGAGAGAAAGTTGGATTGGTCAACACGATATAAAATCATCAATGGAATTACTCGAGGAATGCTATATCTACATGAAGATTCTCAACTTCGAATTATTCATCGTGATCTTAAAGCGAGTAACATCTTGCTAGATGGAGATATGAATCCAAAAATTTCAGACTTTGGTATGGCAAGAATCATCCAATTAGATCAAACTCAAGAAAATACAAGTAGAATTGTTGGTACCTACGGTTACATGTCTCCGGAATATGCAATGTATGGAAACTTTTCTCTAAAATCTGATGTGTATAGCTTTGGAGTTATAATCTTGGAGATTATAAGTGGCCAGAAAAACAAAAGATTTTACTTGTCGGATCTTGCAGAAGACATGTTAACCTATGCTTGGAAATTCTGGAAGGAGGAAACACCACTAGAGTTATTGGATCCGAGTTTGAGAGAGAATTACTCAAGAAATGAGGTGATTAGATGCCTCCATATTGCTTTGTTATGTGTTCAGGAGGATTCTAGGAGTAGACCAACCATGGCATCCATTATTCTAATGCTTAATAGTTATTCGGTTACTTTGTCATTGCCGAAACAGCCAGCATCTTTCATGGGCGGTAAATACAATGACATTGTTGTAGATAGTGATCAATCTACTACCGCCTCTTGTCTGTTCATTTGTAATTCTCTCCTACTTCGTAATAATACTGCTCTCCCTTCTGCCCGTGGACGTAGCTAA 2841 41.99 MLNFPIFIFLLSYFIIHAHAQTLYRCTPTNNFTTNTPFQSSLNLLLTNLSANAPGANGFFNSSVVGRTPSDTVYGLFQCRGDTTNGSCRNCVMEATRTIASQFCPFSKGAVVWYDDCMLRYSDHFLFSMVSTEPRYGLENPGNMGVDTPRFNQLVMSTLTSTAADASLAVAQMFATEEAMFTWNTTLYTLAQCTADLSNSNCQDCLTGAIRDIPRCCDNKIGGRVLFPSCYVRYEVYPFYLINRTNIVPPPTTTLPPNWTTTSEERRFSSGIIVVAIVAPITVSILLFVLGWYFLRRRGENKYTAEHEDSVDYEITTVESLQFDFKTIDAATNKFSEENKLGEGGFGAVYKGRLENGQEIAVKRLSRRSLQGSKEFKNEVMLVAKLQHRNLVRLLGFCLEGEEKILIYEYIANKSLDYFLFDPERQRVLDWLRRYKIIIGIARGMLYLHEDSRLRIIHRDLKVSNILLDKDMNPKISDFGMAKIIQIDESQGNTNRIVGTYGYMSPEYAMHGNFSMKSDVYSFGVLVLEIISGQKNGNFYMSGIAEDILTYEDPYCRPSMASIVLMLNSDSVTLPLPKEPPFFMRIRGNDCRGDVTDSICRNCLATATKDTARQYCPLRKGAVIWGKQSLNGDNSGHFDSSYFFDEFTTVESLQFYFNTIDAATNKFSAENKLGEGGFGSVYKGILNNGPEIAVKRLSKGSLQDPKRERKLDWSTRYKIINGITRGMLYLHEDSQLRIIHRDLKASNILLDGDMNPKISDFGMARIIQLDQTQENTSRIVGTYGYMSPEYAMYGNFSLKSDVYSFGVIILEIISGQKNKRFYLSDLAEDMLTYAWKFWKEETPLELLDPSLRENYSRNEVIRCLHIALLCVQEDSRSRPTMASIILMLNSYSVTLSLPKQPASFMGGKYNDIVVDSDQSTTASCLFICNSLLLRNNTALPSARGRS 946
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 64117856 64129348 - Hsped.07g20020.1 Hepe07g2002 575397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2002 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2002 946 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524(InterPro)
Hepe07g2002 946 FunFam cysteine-rich receptor-like protein kinase 10 411 552 - -
Hepe07g2002 946 ProSiteProfiles Protein kinase domain profile. 627 892 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2002 946 Pfam Salt stress response/antifungal 150 236 IPR002902 -
Hepe07g2002 946 Pfam Salt stress response/antifungal 26 123 IPR002902 -
Hepe07g2002 946 ProSiteProfiles Gnk2-homologous domain profile. 20 126 IPR002902 -
Hepe07g2002 946 FunFam Cysteine-rich receptor-like protein kinase 10 297 410 - -
Hepe07g2002 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2002 946 SUPERFAMILY Protein kinase-like (PK-like) 652 904 IPR011009 -
Hepe07g2002 946 CDD STKc_IRAK 341 535 - -
Hepe07g2002 946 Gene3D Transferase(Phosphotransferase) domain 1 646 700 - -
Hepe07g2002 946 ProSiteProfiles Gnk2-homologous domain profile. 132 239 IPR002902 -
Hepe07g2002 946 FunFam cysteine-rich receptor-like protein kinase 10 695 895 - -
Hepe07g2002 946 Gene3D Phosphorylase Kinase; domain 1 298 410 - -
Hepe07g2002 946 FunFam Cysteine-rich receptor-like protein kinase 25 134 239 - -
Hepe07g2002 946 SUPERFAMILY Protein kinase-like (PK-like) 323 585 IPR011009 -
Hepe07g2002 946 Pfam Protein tyrosine and serine/threonine kinase 338 535 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2002 946 Pfam Protein tyrosine and serine/threonine kinase 706 885 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2002 946 Gene3D Transferase(Phosphotransferase) domain 1 411 573 - -
Hepe07g2002 946 Gene3D Transferase(Phosphotransferase) domain 1 701 899 - -
Hepe07g2002 946 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 635 703 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Hepe07g2002 946 Gene3D - 19 125 IPR038408 -
Hepe07g2002 946 Gene3D - 588 630 IPR038408 -
Hepe07g2002 946 Gene3D - 138 239 IPR038408 -
Hepe07g2002 946 SMART serkin_6 667 892 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2002 946 SMART serkin_6 335 583 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2002 946 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524(InterPro)
Hepe07g2002 946 ProSiteProfiles Protein kinase domain profile. 335 643 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0190 Hepe-Chr2:1965656 Hepe07g2002 Hepe-Chr7:64117856 4.38e-38 dispersed
Hepe03g0355 Hepe-Chr3:5079631 Hepe07g2002 Hepe-Chr7:64117856 9.68e-76 dispersed
Hepe04g1790 Hepe-Chr4:72847699 Hepe07g2002 Hepe-Chr7:64117856 1.06e-29 dispersed
Hepe07g1999 Hepe-Chr7:64049993 Hepe07g2002 Hepe-Chr7:64117856 6.62e-249 dispersed
Hepe07g2000 Hepe-Chr7:64064169 Hepe07g2002 Hepe-Chr7:64117856 7.17e-56 dispersed
Hepe07g2002 Hepe-Chr7:64117856 Hepe08g0499 Hepe-Chr8:4373578 4.82e-94 dispersed
Hepe07g2001 Hepe-Chr7:64065652 Hepe07g2002 Hepe-Chr7:64117856 6.96e-178 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72980 PF07714 PK_Tyr_Ser-Thr 1.40E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2002 - - - 0.0