Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2012 ATGTTTGGAGCACATGATTTTGAAGATCATGATCAGGATCTACTACTACTGGAGATGACTCAAAAAAACTTTGAAAGTGAACTGGAAAAATTTGGAGAAGATGAGTTCGAGAGTCGGTCGGTGACCGACGCCATGGAAGCTCCGTCGGGAGAGGAACTAGATCTTCAGAATCAGAGTAATAAGAGGAAGCGTTACCATCGTCATACTCAGCTCCAAATCCAGGAAATGGAAGCGTTTTTTAAGGAGTGTCCTCACCCAGATGACAAACAAAGAAAGGAGCTGAGCCGTGAGCTAGGGCTCGAACCACTCCAAGTCAAGTTCTGGTTTCAAAACAAGCGCACCCAAATGAAGGCTCACAATGAACGGCATGAGAATGCAATATTGAAGGCTCAAAACGAGAAACTAAGAGCAGAGAACATGAGGTACAAGGAAGCCCTTAGCAATACGAGTTGCCCCAATTGTGGAGGTCCTTCTGCCCTTGGTGAGATGTCCTTTGATGGCCAACATTTGAGAATTGACAATGCACATTTAAGAGACGAGATTGAGAGATTAAACACAGTTAGTACGAAATATGGTGGGAAGGCATGGGGTTCCCATTCTCATATTCCATCTCATCATGTTCCTTCTCGAGCCACCCTTGATTTGGGCGTCGGCAGAATAAATCCCCAATCAGATTTCTTAGGGGAATTAATGTATGGATCATCATCAGTTGGAGATAATCAGGTGTTAAAGAAGTCAGTGACTACTGAAATTGATAAGCCAGTGATCGTTGAGCTTGCAGTTTCAGCCATGGAAGAAGTTTACAGAATGGCTCAAGCAGGTGAACCCTTGTGGCTTCCTGTTGCTGAAAACTCCATGGAAATGCTCAATGACGATGAGTACTTGAGGACTTACTCTAGAGGCATTGGCCCTAGAATTTTGGGGCTTACCTTTGAAGCTTCAAGGGAATCTTCCATTGTTGCTTTCAATCATTTGAAACTTGTCGACATTCTCATGGATGTGAATCAGTGGTCAACTATATTTTGTGGGATTGTTTCAAGAGCATTGACCCTCGAAGTTTTATCAAATGGAGTTGGCGGAAACTACAATGGAGCTATACAAGTCATGTCAGCAGAGTTCCAGGTTCCTTCTCCTCTTGTTCCAACTCGAGAAAATTACTTCGTGAGATACTGTAAGCAACAGCCCGACGGGACTTGGGCTGTGGTCGATGTTTCTCTCGACTATTTACGCCCTACTCCTATTTCAACTACTCGAAGAAGACCATCCGGTTGCTTAATCCAACAACTTCCAAACGGTTTCTCAAAGGTTATTTGGGTTGAACATGTCGAAGTGGATGATCGAGCCGTGCACAATTTGTACAAACGATTGGTTACTTGTGGGCTTGCTTTTGGCGCAAAACGATGGGTGGCTACTTTGGATCGACAATGCCAACGCCTAACCAACTCTTTGGCTACCAATATTCCTGCTGTAGACATATGTGTGGTAACAGGGCAAGAGGGGAGGAAAAGCGTAATGAAGCTAGCAGAGAGGATGAAAACGAGCTTCTGCAGTGGCGTTGGGGCTTCTTCTTCTCACAATTGGACCACATTATCCGCCATTGGTTCGGACGATGTTCGGGTTATGGCCCGAAAGAGTCTCGACGACCCTGGCCGGCCTCCTGGAATTGTTCTAAATGCAGCAACTTCCTTCTGGATTCCAATTCCCCCTAACAGGGTCTTTCATTTCCTCCGAGATCAAAACACCCGCAGTCAGTGGGATATACTTTCAAACGGTGGGCTAGTCCAAGAAATGGCTCGCATTGGCAACGATCGCAACCCGGGAAATTGCGTGTCGTTGCTTCGTGTTAACAGTGCAAATTCAAGCCAGAGCAACATGCTGATACTACAAGAAAGCTGCAGCGACATGACCGGTTGCTACATAATCTACGCACCGGTGGACAGCGCCGCCATGAACATGGTGTTAAGCGGCGGAGACCCTGATTACGTAGCTCTGTTGCCATCCGGATTCGCCATACTCCCTGATGGGCCTATTGGGCCAGGGCCCAATGGAGCAGGAGGAATCCTGGAATTCGGGTCGGGTGGTTCGTTATTGACAGTTGCATTTCAGATATTGGTTGATTCAATCCCAACTGCAAAACTGTCTCTGGGATCGGTGGCAACGGTCAACAGCTTGATCAAGTGTACGGTGGAAAGAATTAGAGCTGCAGTGATGTGTGAGAATCCATGA 2226 46.41 MFGAHDFEDHDQDLLLLEMTQKNFESELEKFGEDEFESRSVTDAMEAPSGEELDLQNQSNKRKRYHRHTQLQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAHNERHENAILKAQNEKLRAENMRYKEALSNTSCPNCGGPSALGEMSFDGQHLRIDNAHLRDEIERLNTVSTKYGGKAWGSHSHIPSHHVPSRATLDLGVGRINPQSDFLGELMYGSSSVGDNQVLKKSVTTEIDKPVIVELAVSAMEEVYRMAQAGEPLWLPVAENSMEMLNDDEYLRTYSRGIGPRILGLTFEASRESSIVAFNHLKLVDILMDVNQWSTIFCGIVSRALTLEVLSNGVGGNYNGAIQVMSAEFQVPSPLVPTRENYFVRYCKQQPDGTWAVVDVSLDYLRPTPISTTRRRPSGCLIQQLPNGFSKVIWVEHVEVDDRAVHNLYKRLVTCGLAFGAKRWVATLDRQCQRLTNSLATNIPAVDICVVTGQEGRKSVMKLAERMKTSFCSGVGASSSHNWTTLSAIGSDDVRVMARKSLDDPGRPPGIVLNAATSFWIPIPPNRVFHFLRDQNTRSQWDILSNGGLVQEMARIGNDRNPGNCVSLLRVNSANSSQSNMLILQESCSDMTGCYIIYAPVDSAAMNMVLSGGDPDYVALLPSGFAILPDGPIGPGPNGAGGILEFGSGGSLLTVAFQILVDSIPTAKLSLGSVATVNSLIKCTVERIRAAVMCENP 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 64331400 64341745 + Hsped.07g20120.1 Hepe07g2012 575407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2012 741 SUPERFAMILY Bet v1-like 505 733 - -
Hepe07g2012 741 ProSiteProfiles START domain profile. 249 481 IPR002913 GO:0008289(InterPro)
Hepe07g2012 741 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Hepe07g2012 741 Gene3D - 49 135 - -
Hepe07g2012 741 FunFam Homeobox-leucine zipper protein GLABRA 2 258 477 - -
Hepe07g2012 741 CDD homeodomain 61 120 IPR001356 GO:0003677(InterPro)
Hepe07g2012 741 Gene3D - 283 476 IPR023393 -
Hepe07g2012 741 SMART START_1 258 478 IPR002913 GO:0008289(InterPro)
Hepe07g2012 741 SUPERFAMILY Homeodomain-like 46 119 IPR009057 -
Hepe07g2012 741 Pfam Homeodomain 62 117 IPR001356 GO:0003677(InterPro)
Hepe07g2012 741 CDD START_ArGLABRA2_like 253 477 - -
Hepe07g2012 741 SUPERFAMILY Bet v1-like 249 479 - -
Hepe07g2012 741 Pfam START domain 259 478 IPR002913 GO:0008289(InterPro)
Hepe07g2012 741 Coils Coil 113 148 - -
Hepe07g2012 741 FunFam Homeobox-leucine zipper protein HDG1 49 135 - -
Hepe07g2012 741 SMART HOX_1 60 123 IPR001356 GO:0003677(InterPro)
Hepe07g2012 741 MobiDBLite consensus disorder prediction 28 61 - -
Hepe07g2012 741 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677(InterPro)
Hepe07g2012 741 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 56 738 IPR042160 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0223 Hepe-Chr1:35032907 Hepe07g2012 Hepe-Chr7:64331400 5.86e-24 dispersed
Hepe07g0176 Hepe-Chr7:1574301 Hepe07g2012 Hepe-Chr7:64331400 1.49e-221 dispersed
Hepe07g2012 Hepe-Chr7:64331400 Hepe07g2556 Hepe-Chr7:70005103 1.15e-201 dispersed
Hepe01g1298 Hepe-Chr1:78181203 Hepe07g2012 Hepe-Chr7:64331400 3.76e-120 wgd
Hepe02g0212 Hepe-Chr2:2108993 Hepe07g2012 Hepe-Chr7:64331400 0.0 wgd
Hepe04g1781 Hepe-Chr4:72715185 Hepe07g2012 Hepe-Chr7:64331400 0.0 wgd
Hepe07g2012 Hepe-Chr7:64331400 Hepe08g0472 Hepe-Chr8:4138873 0.0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56017 PF01852 START 2.00E-49 CL0209 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2012 K09338 - csv:101212604 1190.25