Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2014 ATGCGTCACCTATTTGGGACATGGTCAACTGTGTTTCCACCTTCCGTCCTTCGTAAGATTGATGCTCAACTTTCTCAGTTAACAACACAAGAGTCCCCAGGTTTGACATCCTCAAGGGCTTCTGAGTCTCCTCGGCCAACTCATGGCATTCATGTCAATCCAAAATACTTGCGTCAACTGGATCACTCAGTGGTGGATAAACATATGCAAGATGCAAGAGGGACCTCAGCTCTAAAAGTTCATGATAAAAAACTTGCTCCTGGATACGATGAGTATGACTATGAAAATGCAGATGTTCTCGAACATGGTGGAGCTCAACCATTTAATTCAATGGGAAGCATGGGTCAGGATTCTTTTGCTCTTGGAACAAATAAAGCAAATATAAAGCTACCGAAATCGTCTCTGTCTTCAAGAATTGGACACAATAGACCTCTACAATCAGTTGGTGATGAACTTGAAGCAGTTAGAGCCTCACCATCGCAGAATGTATATGATTATGAAGGTTCTAGAATGATTGATCGAAATGAGGATACAACTAAATGGAGGAGAAAACAATATCCTGATGATAATTTGAATGGACTTGAAAGTACTTCATATAATATTAGAAATGGACATGCACTTGAGGGACCAAGAGCTTTAATTGAAGCATATGGAAGCGATAAAGGAAAAGGCTATTTAAATGACAATCCACCACAGGTTGAACATTTTTCTATTAATGGTATAGACAACAAGGTGACCCCAGTAACTTGGCAGAACACTGAAGAAGAGGAGTTTGATTGGGAAGATATGAGCCCCACATTAGCTGACAGAGGCAGAAGTAATGATATGTTGAAACCACCTATCCCGCCTTCAAGATTTAGGACAAGAATAGGATTTGACAGATCAAATGCTATGTCTATAGAGCCTGGAATGAGAAGCAATTGGTCTAGTCAGGTTCAGCTGCCTACTTCTATTGATAACTCCATAGTTATTGAAGATGTGGTCCCATCAGCATCTGATATTTGGAATATGCAGAATCACCTCTCTCAGACATCCCAGAACCTCGTGAACACTAAAGGAACAGGAAGGAATTTTCAGATGCCTTTGTTGGGGAGAGGCATAGCTTCATCTGGTGGGGACAAGATTTCTCCTTTTGGCGATAAGCTTCTGACAAATGATGCTTTGCATAGGCCCCCTAGCATTGTTTCAAGATTGGGTTCTGGTCTTGACTCTAGCATGGAGTCACAATCAGTTGTACAATCTATGGGCCCAAGGCATCCTGGGAATGTTCCCAACTCTTGCCCACCCTCTAGGCCTCCATTTTTTCCTGTACCAAGACACAATAAGAGTCAGTTTGAGTCTTTAAATGGTAGCAATTCTTTCATCAACCGTGCAAATAGGTCTTTTTTGCCTGAGCAGCAGATGAATAATTTGAGAAATAAGGAGCTAAGTCTTACAACTAAGTCGCCACAAGTTGGTAATACTGGGCGTATTCCTTTGACTCAGGGAAACCAATTGCAGGCCATCCCTTTAAAACCACAATTTCTACCATCTCAGGACTTGCAGGATAATTTTAGTGCATCAGCAGTACCTCCAGCATTACAACATTTAATGACACCATCCTTGAGTCAAGGATACAGTTCACAAGGATATCGCCCTGCTAGTGAGTGTTTGTCAAGTTCTGCCCCTATCGGGCAATGGAGCTTACCTGTTCATAATAGCCTTGGTAACCCTTTGCATTTACAAGGGGGGCCGCTGCCACCTCTACCACCTGGGCCTCATCCTACTTCTGTTCAAACGATACCTATCTCTCAAAAGGCAAGATCCCTTGTTCCTGGTCAGCAACCAGGAACTGCATTTTCTGGCCTGATAAGTTCTCTCATGGCCCAGGGTTTAATCTCATTGAACAATCAAGCTTCTGTACAGGATTCTGTTGGGTTGGAATTCAATCCAGATGTACTCAAGGTGCGACATGAATCTGCAATAACTGCTCTATATGCTGATCTTCCTAGACAATGCATGACCTGTGGCCTTCGATTCAAGTCCCAGGAAGAGCATAGTAATCATATGGATTGGCATGTCACTAGAAACCGTATGTCAAAAAGTAGGAAGCAAAAGCCTTCCCGTAAGTGGTTTGTAAGTACAAGCATGTGGCTTAGTGGTGCAGAGGCTTTGGGAACCGAGGCAGTTCCAGGATTTTTGCCTGCTGAGGTCATTGTAGAGAAAAAGGATGATGAAGAACTAGCTGTTCCCGCAGATGAGGATCAGAAGACGTGTGCACTATGTGGAGAACCTTTTGATGATTTTTACAGTGATGAAACAGAGGAGTGGATGTATAGGGGTGCTGTCTACATGAACGCACCCGATGGACAAACAGCCGGCATGGATAAATCTCAGTTAGGGCCCATAGTGCATGCTAAATGCATGACTGAATCTAATGTGGTTCCCTCTGAAAATTTTGACCAAGATGAACAAGGGGGAGTTAGTGAAGAGGGTAGTCGAAGAAAACGTTTGCGGAGCTAG 2502 43.13 MRHLFGTWSTVFPPSVLRKIDAQLSQLTTQESPGLTSSRASESPRPTHGIHVNPKYLRQLDHSVVDKHMQDARGTSALKVHDKKLAPGYDEYDYENADVLEHGGAQPFNSMGSMGQDSFALGTNKANIKLPKSSLSSRIGHNRPLQSVGDELEAVRASPSQNVYDYEGSRMIDRNEDTTKWRRKQYPDDNLNGLESTSYNIRNGHALEGPRALIEAYGSDKGKGYLNDNPPQVEHFSINGIDNKVTPVTWQNTEEEEFDWEDMSPTLADRGRSNDMLKPPIPPSRFRTRIGFDRSNAMSIEPGMRSNWSSQVQLPTSIDNSIVIEDVVPSASDIWNMQNHLSQTSQNLVNTKGTGRNFQMPLLGRGIASSGGDKISPFGDKLLTNDALHRPPSIVSRLGSGLDSSMESQSVVQSMGPRHPGNVPNSCPPSRPPFFPVPRHNKSQFESLNGSNSFINRANRSFLPEQQMNNLRNKELSLTTKSPQVGNTGRIPLTQGNQLQAIPLKPQFLPSQDLQDNFSASAVPPALQHLMTPSLSQGYSSQGYRPASECLSSSAPIGQWSLPVHNSLGNPLHLQGGPLPPLPPGPHPTSVQTIPISQKARSLVPGQQPGTAFSGLISSLMAQGLISLNNQASVQDSVGLEFNPDVLKVRHESAITALYADLPRQCMTCGLRFKSQEEHSNHMDWHVTRNRMSKSRKQKPSRKWFVSTSMWLSGAEALGTEAVPGFLPAEVIVEKKDDEELAVPADEDQKTCALCGEPFDDFYSDETEEWMYRGAVYMNAPDGQTAGMDKSQLGPIVHAKCMTESNVVPSENFDQDEQGGVSEEGSRRKRLRS 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 64369130 64378696 - Hsped.07g20140.1 Hepe07g2014 575409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2014 833 MobiDBLite consensus disorder prediction 28 51 - -
Hepe07g2014 833 MobiDBLite consensus disorder prediction 807 833 - -
Hepe07g2014 833 MobiDBLite consensus disorder prediction 265 288 - -
Hepe07g2014 833 MobiDBLite consensus disorder prediction 28 44 - -
Hepe07g2014 833 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 1 824 IPR045154 GO:0000993(PANTHER)|GO:0000993(InterPro)|GO:0003729(PANTHER)|GO:0003729(InterPro)|GO:0005737(PANTHER)|GO:0005849(PANTHER)|GO:0006369(InterPro)|GO:0006369(PANTHER)|GO:0006378(PANTHER)|GO:0031124(InterPro)
Hepe07g2014 833 ProSitePatterns Zinc finger C2H2 type domain signature. 666 686 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0339 Hepe-Chr5:4149409 Hepe07g2014 Hepe-Chr7:64369130 7.43e-34 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2014 K14400 - csv:101206311 1427.92