Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2036 ATGTCTTGTTCAAATCTGACTATGTTGATGTCTTCAAAACCAACCGTCTCTGATGCATCCTCCCTTTCTTTCAGCTCTTTTCTGAGCCCTTTTCAGCTCCCTTCACAAAGCTACCCTGCCCGATCATTGTCAGTTTCGCCGATTCATTGCAGTCTTCGGGATCTCCGAGACCGTATCGAGTCGGTGAAGAACACCCAAAAGATCACTGAAGCTATGAAGCTTGTTGCTGCTGCCAAAGTCCGCAGGGCTCAAGAAGCTGTTGTTAATGGAAGACCCTTCTCAGAAGCCTTGGTTGAGGTCCTTTACAACATCAACGAGCAACTTCAAACAGAAGATGTTGATGTTCCTCTAACCAAAGTAAGACCTGTCAAGAAGGTTGCATTAGTAGTTGTCACTGGTGACCGAGGTCTTTGCGGCGGTTTCAACAACAGCATCATAAAGAAAGCTGAAGCCAGGATTTCAGAATTGAAGCAACTGGGTCTTGATTACACTGTCATCAGTGTTGGCAAAAAGGGTAACTCCTATTTCCTTCGCCGGCCTTACATCCCGGTCGATAAGTACTTTGAAGGTGGCACTCTCCCAACTGCCAAAGAAGCTCAAGCTATAGCTGATGATGTTTTCTCACTCTTTGTTAGTGAGGAGGTTGATAAAGTAGAGCTTTTGTACACGAAATTCGTGTCTTTGGTCAAATCTGATCCTATAATTCACACCCTTCTTCCTCTCTCACCCAAGGGAGAGATCTGTGATATAAATGGAATCTGTGTTGATGCTGCAGAAGATGAGTTCTTCAGGTTGACAACAAAGGAAGGGAAGTTGACAGTGGAAAGGGATACGGTGAGGACGAGCACATCGGATTTCTCTCCGATTTTGGAGTTTGAGCAAGACCCAGTTCAGATCTTGGATGCTTTGTTGCCTCTGTATTTGAACAGTCAGGTTTTGAGGTCACTGCAAGAATCACTTGCTAGTGAGCTTGCAGCTAGAATGAGTGCAATGAGCAATGCTTCTGATAATGCTTCTGAGCTGAAGAGAAATTTGTCGATTGTGTACAACAGACGGCGCCAAGCTAAGATCACTGGAGAAATATTGGAGATTGTTGCTGGTGCTAATGCTTTGACTTAA 1119 44.68 MSCSNLTMLMSSKPTVSDASSLSFSSFLSPFQLPSQSYPARSLSVSPIHCSLRDLRDRIESVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKQLGLDYTVISVGKKGNSYFLRRPYIPVDKYFEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPIIHTLLPLSPKGEICDINGICVDAAEDEFFRLTTKEGKLTVERDTVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQVLRSLQESLASELAARMSAMSNASDNASELKRNLSIVYNRRRQAKITGEILEIVAGANALT 372
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 64556874 64558244 + Hsped.07g20360.1 Hepe07g2036 575431
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2036 372 Gene3D - 119 242 - -
Hepe07g2036 372 PRINTS ATP synthase gamma subunit signature 123 142 IPR000131 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Hepe07g2036 372 PRINTS ATP synthase gamma subunit signature 349 370 IPR000131 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Hepe07g2036 372 PRINTS ATP synthase gamma subunit signature 216 233 IPR000131 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Hepe07g2036 372 PRINTS ATP synthase gamma subunit signature 318 337 IPR000131 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Hepe07g2036 372 ProSitePatterns ATP synthase gamma subunit signature. 357 370 IPR023632 -
Hepe07g2036 372 Pfam ATP synthase 51 371 IPR000131 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Hepe07g2036 372 NCBIfam ATP synthase F1 subunit gamma 51 371 IPR000131 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Hepe07g2036 372 PANTHER ATP SYNTHASE GAMMA CHAIN 1 371 IPR000131 GO:0000275(PANTHER)|GO:0009535(PANTHER)|GO:0015986(InterPro)|GO:0015986(PANTHER)|GO:0045261(InterPro)|GO:0046933(InterPro)|GO:0046933(PANTHER)
Hepe07g2036 372 FunFam ATP synthase gamma chain, chloroplastic 268 371 - -
Hepe07g2036 372 Gene3D ATP synthase, gamma subunit, helix hairpin domain 50 118 - -
Hepe07g2036 372 FunFam ATP synthase gamma chain, chloroplastic 50 117 - -
Hepe07g2036 372 Hamap ATP synthase gamma chain [atpG]. 49 371 IPR000131 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Hepe07g2036 372 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 51 371 IPR035968 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Hepe07g2036 372 CDD F1-ATPase_gamma 51 368 IPR000131 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Hepe07g2036 372 FunFam ATP synthase gamma chain, chloroplastic 119 242 - -
Hepe07g2036 372 Gene3D ATP synthase, gamma subunit, helix hairpin domain 267 371 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0578 Hepe-Chr5:8209307 Hepe07g2036 Hepe-Chr7:64556874 3.24e-125 dispersed
Hepe07g2467 Hepe-Chr7:68978243 Hepe07g2036 Hepe-Chr7:64556874 3.08e-11 transposed
Hepe04g1768 Hepe-Chr4:72617337 Hepe07g2036 Hepe-Chr7:64556874 2.18e-207 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2036 K02115 - csv:101214408 638.262