Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2082 ATGCTTTCCAGAGTTGGGAATGTTGTTTGGATGGAGAATCGCGAGGATGAAGATTCTGCTTCTTGGACCAAAAACAACAGCGAATTCCTTCTGAACCATTCTGCTAATTGCTCTGTTTTGGAGAACAGGGATGAATTGAGCTCTCTTTCTACCTTCAAATCCATGCTCGAGGTTGAAGATGACTGGTGCATCACTGGTAATTCTCTCCATAATCATAATGAACTCAATGACATTACATTTTCTCAGAATTTCAATGACCCACCTGATAATTTGTTGCTTCCCCATGGAGATTCCTCCTCTTCTTGTTCCCCTTCTTCTTCTATGTTCAATAACATTGACCCATCTCAATTGCGATTCTTCTTACCTCCAAATCGCACTCTCTCTTCATTTCACAAGGTTATTTCTAACAACCCTTTGGAGAATGGCTTCGATTTGGGGGGAGAGGTTGGGTTTCTTGACGTCCAAGCTTCAAATGCTTCGTCTCTGCTCAACAATGGAGGTGGGTTATTAACTGGGTTCACTGATTTAAGCCCAACTAGCCAGATAAACAGTCCTAATTTGTGCTTAAGCTCTCAACTAACAACCCCAAATGTGCCTCAATTGACTGATGATTGTTCGGGGTTAGCTGGATTTCAGAGTTTCGATGAGAATTTGGGAAATGCTCTGCTTCTGAATCGGTCTAAGCTTTTGAGACCACTTGAATCTTTTCCCACGGTGGGAGCTCAGCCGACTCTTTTTCAGAAGAGGGCAGCTCTTAGAAAAAGCTTAGCCGCCGATAAGGGAAGCAGTTTGGGGGTTTTGAGCTCCGATGGCGGCTGGTTTTCTAACAGGATTGAAGGGGGCATTGGAAAAAATCAAGTGGGTGATGAAATTGGGAAGAAGAGGAAAATGATTTATGCAGATGAGTTGCAAGATACTAGCATTGACACATCCCATTTCAATTATGATTCTGATGACTTTACTGAGAATAATTACACCAAGTTTGATGAGAGTGGTAGAACTCTTGGAAATACATCTAATGCCAATAGTACGGTGACCGGCGGCGACCAGAAGGGGAAGAAGAAAGGACTTCCGGCGAAGAATTTGATGGCTGAGAGACGCCGGAGGAAGAAGCTCAATGATCGGCTCTACATGCTGAGATCCGTTGTTCCCAAAATCAGCAAAATGGATAGAGCTTCAATTCTTGGGGATGCAATTGAGTACTTGAAGGAACTACTGCAAAGAATCAATGACCTCCATAATGAATTGGAGTTTACCCCTTCTGGGACAGCGTTGACACCGAGCACAAGCTTTCACCCCCTGACTCCAACTCCGCCGGGCCTCTCGAGTCGTATAAAGGAGGAGCTTTGCCCTAGCTCATATCCCAGCCCTAATGGCCAACCTGCAAGGGTCGAAGTTAGGCTACGAGAAGGACGGGCAGTAAATATACACATGTTCTGTGGTCGTCAGCCTGGTCTCTTGCTCTCCACAGTTAGGGCATTAGATAATCTTGGATTAGACATCCAGCAAGCTGTGATTAGTTGCTTCAATGGTTTTGCCATGGACATTTTCCGAGCAGAGCAATGCAGCGAAGGCCAGGATGTCCATCCTGAGAAGATAAAAGCAATACTATTGGATTCAGTTGGTTTCAATGGTGCGACATAG 1644 44.71 MLSRVGNVVWMENREDEDSASWTKNNSEFLLNHSANCSVLENRDELSSLSTFKSMLEVEDDWCITGNSLHNHNELNDITFSQNFNDPPDNLLLPHGDSSSSCSPSSSMFNNIDPSQLRFFLPPNRTLSSFHKVISNNPLENGFDLGGEVGFLDVQASNASSLLNNGGGLLTGFTDLSPTSQINSPNLCLSSQLTTPNVPQLTDDCSGLAGFQSFDENLGNALLLNRSKLLRPLESFPTVGAQPTLFQKRAALRKSLAADKGSSLGVLSSDGGWFSNRIEGGIGKNQVGDEIGKKRKMIYADELQDTSIDTSHFNYDSDDFTENNYTKFDESGRTLGNTSNANSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELEFTPSGTALTPSTSFHPLTPTPPGLSSRIKEELCPSSYPSPNGQPARVEVRLREGRAVNIHMFCGRQPGLLLSTVRALDNLGLDIQQAVISCFNGFAMDIFRAEQCSEGQDVHPEKIKAILLDSVGFNGAT 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 65083710 65087691 - Hsped.07g20820.1 Hepe07g2082 575477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2082 547 MobiDBLite consensus disorder prediction 331 356 - -
Hepe07g2082 547 Pfam Plant bHLH transcription factor, ACT-like domain 464 536 IPR054502 -
Hepe07g2082 547 Pfam Helix-loop-helix DNA-binding domain 363 405 IPR011598 GO:0046983(InterPro)
Hepe07g2082 547 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 359 424 IPR036638 GO:0046983(InterPro)
Hepe07g2082 547 SMART finulus 362 411 IPR011598 GO:0046983(InterPro)
Hepe07g2082 547 MobiDBLite consensus disorder prediction 423 461 - -
Hepe07g2082 547 MobiDBLite consensus disorder prediction 331 349 - -
Hepe07g2082 547 FunFam BHLH transcription factor 352 420 - -
Hepe07g2082 547 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 314 542 IPR051358 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Hepe07g2082 547 MobiDBLite consensus disorder prediction 423 437 - -
Hepe07g2082 547 CDD bHLH_AtAMS_like 359 422 - -
Hepe07g2082 547 Gene3D - 350 419 IPR036638 GO:0046983(InterPro)
Hepe07g2082 547 Coils Coil 395 415 - -
Hepe07g2082 547 CDD ACT_UUR-ACR-like 476 536 - -
Hepe07g2082 547 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 356 405 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2191 Hepe-Chr1:86605085 Hepe07g2082 Hepe-Chr7:65083710 1.01e-38 dispersed
Hepe02g1651 Hepe-Chr2:22340527 Hepe07g2082 Hepe-Chr7:65083710 8.55e-152 dispersed
Hepe04g1377 Hepe-Chr4:69436800 Hepe07g2082 Hepe-Chr7:65083710 2.90e-35 dispersed
Hepe06g1999 Hepe-Chr6:71149137 Hepe07g2082 Hepe-Chr7:65083710 3.75e-09 dispersed
Hepe07g2082 Hepe-Chr7:65083710 Hepe10g1639 Hepe-Chr10:53096347 4.61e-21 dispersed
Hepe07g2082 Hepe-Chr7:65083710 Hepe10g0404 Hepe-Chr10:4507374 6.53e-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56021 PF00010 HLH 2.10E-09 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2082 - - - 0.0