Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g2082 | ATGCTTTCCAGAGTTGGGAATGTTGTTTGGATGGAGAATCGCGAGGATGAAGATTCTGCTTCTTGGACCAAAAACAACAGCGAATTCCTTCTGAACCATTCTGCTAATTGCTCTGTTTTGGAGAACAGGGATGAATTGAGCTCTCTTTCTACCTTCAAATCCATGCTCGAGGTTGAAGATGACTGGTGCATCACTGGTAATTCTCTCCATAATCATAATGAACTCAATGACATTACATTTTCTCAGAATTTCAATGACCCACCTGATAATTTGTTGCTTCCCCATGGAGATTCCTCCTCTTCTTGTTCCCCTTCTTCTTCTATGTTCAATAACATTGACCCATCTCAATTGCGATTCTTCTTACCTCCAAATCGCACTCTCTCTTCATTTCACAAGGTTATTTCTAACAACCCTTTGGAGAATGGCTTCGATTTGGGGGGAGAGGTTGGGTTTCTTGACGTCCAAGCTTCAAATGCTTCGTCTCTGCTCAACAATGGAGGTGGGTTATTAACTGGGTTCACTGATTTAAGCCCAACTAGCCAGATAAACAGTCCTAATTTGTGCTTAAGCTCTCAACTAACAACCCCAAATGTGCCTCAATTGACTGATGATTGTTCGGGGTTAGCTGGATTTCAGAGTTTCGATGAGAATTTGGGAAATGCTCTGCTTCTGAATCGGTCTAAGCTTTTGAGACCACTTGAATCTTTTCCCACGGTGGGAGCTCAGCCGACTCTTTTTCAGAAGAGGGCAGCTCTTAGAAAAAGCTTAGCCGCCGATAAGGGAAGCAGTTTGGGGGTTTTGAGCTCCGATGGCGGCTGGTTTTCTAACAGGATTGAAGGGGGCATTGGAAAAAATCAAGTGGGTGATGAAATTGGGAAGAAGAGGAAAATGATTTATGCAGATGAGTTGCAAGATACTAGCATTGACACATCCCATTTCAATTATGATTCTGATGACTTTACTGAGAATAATTACACCAAGTTTGATGAGAGTGGTAGAACTCTTGGAAATACATCTAATGCCAATAGTACGGTGACCGGCGGCGACCAGAAGGGGAAGAAGAAAGGACTTCCGGCGAAGAATTTGATGGCTGAGAGACGCCGGAGGAAGAAGCTCAATGATCGGCTCTACATGCTGAGATCCGTTGTTCCCAAAATCAGCAAAATGGATAGAGCTTCAATTCTTGGGGATGCAATTGAGTACTTGAAGGAACTACTGCAAAGAATCAATGACCTCCATAATGAATTGGAGTTTACCCCTTCTGGGACAGCGTTGACACCGAGCACAAGCTTTCACCCCCTGACTCCAACTCCGCCGGGCCTCTCGAGTCGTATAAAGGAGGAGCTTTGCCCTAGCTCATATCCCAGCCCTAATGGCCAACCTGCAAGGGTCGAAGTTAGGCTACGAGAAGGACGGGCAGTAAATATACACATGTTCTGTGGTCGTCAGCCTGGTCTCTTGCTCTCCACAGTTAGGGCATTAGATAATCTTGGATTAGACATCCAGCAAGCTGTGATTAGTTGCTTCAATGGTTTTGCCATGGACATTTTCCGAGCAGAGCAATGCAGCGAAGGCCAGGATGTCCATCCTGAGAAGATAAAAGCAATACTATTGGATTCAGTTGGTTTCAATGGTGCGACATAG | 1644 | 44.71 | MLSRVGNVVWMENREDEDSASWTKNNSEFLLNHSANCSVLENRDELSSLSTFKSMLEVEDDWCITGNSLHNHNELNDITFSQNFNDPPDNLLLPHGDSSSSCSPSSSMFNNIDPSQLRFFLPPNRTLSSFHKVISNNPLENGFDLGGEVGFLDVQASNASSLLNNGGGLLTGFTDLSPTSQINSPNLCLSSQLTTPNVPQLTDDCSGLAGFQSFDENLGNALLLNRSKLLRPLESFPTVGAQPTLFQKRAALRKSLAADKGSSLGVLSSDGGWFSNRIEGGIGKNQVGDEIGKKRKMIYADELQDTSIDTSHFNYDSDDFTENNYTKFDESGRTLGNTSNANSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELEFTPSGTALTPSTSFHPLTPTPPGLSSRIKEELCPSSYPSPNGQPARVEVRLREGRAVNIHMFCGRQPGLLLSTVRALDNLGLDIQQAVISCFNGFAMDIFRAEQCSEGQDVHPEKIKAILLDSVGFNGAT | 547 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 65083710 | 65087691 | - | Hsped.07g20820.1 | Hepe07g2082 | 575477 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g2082 | 547 | MobiDBLite | consensus disorder prediction | 331 | 356 | - | - | |
Hepe07g2082 | 547 | Pfam | Plant bHLH transcription factor, ACT-like domain | 464 | 536 | IPR054502 | - | |
Hepe07g2082 | 547 | Pfam | Helix-loop-helix DNA-binding domain | 363 | 405 | IPR011598 | GO:0046983(InterPro) | |
Hepe07g2082 | 547 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 359 | 424 | IPR036638 | GO:0046983(InterPro) | |
Hepe07g2082 | 547 | SMART | finulus | 362 | 411 | IPR011598 | GO:0046983(InterPro) | |
Hepe07g2082 | 547 | MobiDBLite | consensus disorder prediction | 423 | 461 | - | - | |
Hepe07g2082 | 547 | MobiDBLite | consensus disorder prediction | 331 | 349 | - | - | |
Hepe07g2082 | 547 | FunFam | BHLH transcription factor | 352 | 420 | - | - | |
Hepe07g2082 | 547 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 314 | 542 | IPR051358 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER) | |
Hepe07g2082 | 547 | MobiDBLite | consensus disorder prediction | 423 | 437 | - | - | |
Hepe07g2082 | 547 | CDD | bHLH_AtAMS_like | 359 | 422 | - | - | |
Hepe07g2082 | 547 | Gene3D | - | 350 | 419 | IPR036638 | GO:0046983(InterPro) | |
Hepe07g2082 | 547 | Coils | Coil | 395 | 415 | - | - | |
Hepe07g2082 | 547 | CDD | ACT_UUR-ACR-like | 476 | 536 | - | - | |
Hepe07g2082 | 547 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 356 | 405 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g2191 | Hepe-Chr1:86605085 | Hepe07g2082 | Hepe-Chr7:65083710 | 1.01e-38 | dispersed | |
Hepe02g1651 | Hepe-Chr2:22340527 | Hepe07g2082 | Hepe-Chr7:65083710 | 8.55e-152 | dispersed | |
Hepe04g1377 | Hepe-Chr4:69436800 | Hepe07g2082 | Hepe-Chr7:65083710 | 2.90e-35 | dispersed | |
Hepe06g1999 | Hepe-Chr6:71149137 | Hepe07g2082 | Hepe-Chr7:65083710 | 3.75e-09 | dispersed | |
Hepe07g2082 | Hepe-Chr7:65083710 | Hepe10g1639 | Hepe-Chr10:53096347 | 4.61e-21 | dispersed | |
Hepe07g2082 | Hepe-Chr7:65083710 | Hepe10g0404 | Hepe-Chr10:4507374 | 6.53e-38 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56021 | PF00010 | HLH | 2.10E-09 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g2082 | - | - | - | 0.0 |