Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g2084 | ATGGCAGCTTTTTCTTATCAATATCAACCCTTTCTTCTTGACTCCATTTTCATGCCCAACAATCCTTTGAAAATGACTGGTTTTTTTGATGACTCAAATTGTTTCTCTCAATTCTACGAACAACAACAACAACCCATTCACCATTTTCCCGAGCTCATCTCTAAACAAAGCCCCGAGTCTTCCATTTTGCTCGACGGATCCGACTGCGCCGCCGCCGACCCCCCCGCCGGAATTCACCTCAAACCTGCCGTTACTGTAACTGTAACTTCCCCTTGTACTAAGAAAAGAAAGAGCCGTAATAATAGCTCCACCGCCAGCTCCGCCCAATCCAAGGGTACTACAGAGAGTACTGAGAAGAAGCAGAAAAACAAGGGGGAATTTGATGAAGGGAAAGAAGGAAATCAGAAGGGCAAAAGTGGAAAGAAAGAGGAGAAAAAAGCTTCAGAAGAAACGACTGGTTACATTCATGTCAGAGCTAGGAGAGGTCAAGCCACAGACAGCCACAGTCTTGCTGAGAGGGTGAGAAGAGAAAAAATTAGTGAAAGGATGAAGACATTACAACGACTTGTTCCTGGTTGCGACAAGGTTACAGGAAAGGCCCTCATGTTGGATGAAATTATCAATTATGTTCAGTCCCTACAAAATCAAGTTGAGTTTCTCTCCATGAAACTCGCTTCTTTCAACCCAATTTTCTTCGACTTCAGAATGGATTTGGATGGCTTAATGATTCAACCAGAGACGTCGTTGAGTAGTATGATTGACACCACCACCACTCCGACGAGCTCAACTCCGGCGATCTCCGCCGGAAATAGCTATCCCCTAATGGATAATTCAGCTAATTTATTTCTACTTCAACAAGGGATGAGTCCAAACGCGTATTCTCAGTCATCTCAGGATAACGTTAAAGTTTCATCATGGGATGTCGAAGACCAGAAACGAAAGCTTTTTATTTCATCAGGAATTGGCGACAACTTGTGTTACTTCCATTAA | 990 | 43.43 | MAAFSYQYQPFLLDSIFMPNNPLKMTGFFDDSNCFSQFYEQQQQPIHHFPELISKQSPESSILLDGSDCAAADPPAGIHLKPAVTVTVTSPCTKKRKSRNNSSTASSAQSKGTTESTEKKQKNKGEFDEGKEGNQKGKSGKKEEKKASEETTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASFNPIFFDFRMDLDGLMIQPETSLSSMIDTTTTPTSSTPAISAGNSYPLMDNSANLFLLQQGMSPNAYSQSSQDNVKVSSWDVEDQKRKLFISSGIGDNLCYFH | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 65134691 | 65136837 | + | Hsped.07g20840.1 | Hepe07g2084 | 575479 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g2084 | 329 | Gene3D | - | 160 | 228 | IPR036638 | GO:0046983(InterPro) | |
Hepe07g2084 | 329 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 161 | 228 | IPR036638 | GO:0046983(InterPro) | |
Hepe07g2084 | 329 | SMART | finulus | 169 | 219 | IPR011598 | GO:0046983(InterPro) | |
Hepe07g2084 | 329 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 93 | 297 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) | |
Hepe07g2084 | 329 | MobiDBLite | consensus disorder prediction | 89 | 114 | - | - | |
Hepe07g2084 | 329 | MobiDBLite | consensus disorder prediction | 115 | 171 | - | - | |
Hepe07g2084 | 329 | MobiDBLite | consensus disorder prediction | 89 | 171 | - | - | |
Hepe07g2084 | 329 | CDD | bHLH_AtBPE_like | 153 | 238 | - | - | |
Hepe07g2084 | 329 | FunFam | Basic helix-loop-helix transcription factor | 160 | 232 | - | - | |
Hepe07g2084 | 329 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 163 | 213 | IPR011598 | GO:0046983(InterPro) | |
Hepe07g2084 | 329 | Pfam | Helix-loop-helix DNA-binding domain | 167 | 214 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g2084 | Hepe-Chr7:65134691 | Hepe10g1832 | Hepe-Chr10:55051312 | 3.17e-35 | dispersed | |
Hepe07g2084 | Hepe-Chr7:65134691 | Hepe08g1014 | Hepe-Chr8:9657898 | 7.95e-36 | transposed | |
Hepe07g2084 | Hepe-Chr7:65134691 | Hepe01g1851 | Hepe-Chr1:83410454 | 9.24e-36 | transposed | |
Hepe07g2084 | Hepe-Chr7:65134691 | Hepe02g0492 | Hepe-Chr2:4842224 | 1.68e-35 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56022 | PF00010 | HLH | 6.20E-07 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g2084 | - | - | - | 0.0 |