Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2084 ATGGCAGCTTTTTCTTATCAATATCAACCCTTTCTTCTTGACTCCATTTTCATGCCCAACAATCCTTTGAAAATGACTGGTTTTTTTGATGACTCAAATTGTTTCTCTCAATTCTACGAACAACAACAACAACCCATTCACCATTTTCCCGAGCTCATCTCTAAACAAAGCCCCGAGTCTTCCATTTTGCTCGACGGATCCGACTGCGCCGCCGCCGACCCCCCCGCCGGAATTCACCTCAAACCTGCCGTTACTGTAACTGTAACTTCCCCTTGTACTAAGAAAAGAAAGAGCCGTAATAATAGCTCCACCGCCAGCTCCGCCCAATCCAAGGGTACTACAGAGAGTACTGAGAAGAAGCAGAAAAACAAGGGGGAATTTGATGAAGGGAAAGAAGGAAATCAGAAGGGCAAAAGTGGAAAGAAAGAGGAGAAAAAAGCTTCAGAAGAAACGACTGGTTACATTCATGTCAGAGCTAGGAGAGGTCAAGCCACAGACAGCCACAGTCTTGCTGAGAGGGTGAGAAGAGAAAAAATTAGTGAAAGGATGAAGACATTACAACGACTTGTTCCTGGTTGCGACAAGGTTACAGGAAAGGCCCTCATGTTGGATGAAATTATCAATTATGTTCAGTCCCTACAAAATCAAGTTGAGTTTCTCTCCATGAAACTCGCTTCTTTCAACCCAATTTTCTTCGACTTCAGAATGGATTTGGATGGCTTAATGATTCAACCAGAGACGTCGTTGAGTAGTATGATTGACACCACCACCACTCCGACGAGCTCAACTCCGGCGATCTCCGCCGGAAATAGCTATCCCCTAATGGATAATTCAGCTAATTTATTTCTACTTCAACAAGGGATGAGTCCAAACGCGTATTCTCAGTCATCTCAGGATAACGTTAAAGTTTCATCATGGGATGTCGAAGACCAGAAACGAAAGCTTTTTATTTCATCAGGAATTGGCGACAACTTGTGTTACTTCCATTAA 990 43.43 MAAFSYQYQPFLLDSIFMPNNPLKMTGFFDDSNCFSQFYEQQQQPIHHFPELISKQSPESSILLDGSDCAAADPPAGIHLKPAVTVTVTSPCTKKRKSRNNSSTASSAQSKGTTESTEKKQKNKGEFDEGKEGNQKGKSGKKEEKKASEETTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASFNPIFFDFRMDLDGLMIQPETSLSSMIDTTTTPTSSTPAISAGNSYPLMDNSANLFLLQQGMSPNAYSQSSQDNVKVSSWDVEDQKRKLFISSGIGDNLCYFH 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 65134691 65136837 + Hsped.07g20840.1 Hepe07g2084 575479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2084 329 Gene3D - 160 228 IPR036638 GO:0046983(InterPro)
Hepe07g2084 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 228 IPR036638 GO:0046983(InterPro)
Hepe07g2084 329 SMART finulus 169 219 IPR011598 GO:0046983(InterPro)
Hepe07g2084 329 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 93 297 IPR024097 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)
Hepe07g2084 329 MobiDBLite consensus disorder prediction 89 114 - -
Hepe07g2084 329 MobiDBLite consensus disorder prediction 115 171 - -
Hepe07g2084 329 MobiDBLite consensus disorder prediction 89 171 - -
Hepe07g2084 329 CDD bHLH_AtBPE_like 153 238 - -
Hepe07g2084 329 FunFam Basic helix-loop-helix transcription factor 160 232 - -
Hepe07g2084 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 213 IPR011598 GO:0046983(InterPro)
Hepe07g2084 329 Pfam Helix-loop-helix DNA-binding domain 167 214 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2084 Hepe-Chr7:65134691 Hepe10g1832 Hepe-Chr10:55051312 3.17e-35 dispersed
Hepe07g2084 Hepe-Chr7:65134691 Hepe08g1014 Hepe-Chr8:9657898 7.95e-36 transposed
Hepe07g2084 Hepe-Chr7:65134691 Hepe01g1851 Hepe-Chr1:83410454 9.24e-36 transposed
Hepe07g2084 Hepe-Chr7:65134691 Hepe02g0492 Hepe-Chr2:4842224 1.68e-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56022 PF00010 HLH 6.20E-07 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2084 - - - 0.0