Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2085 ATGTTCAACGAGTCAGTAAGTGGGCATTCGGTTGTTTCCAGAAATGAAAACCCAAAAGGACGGTGCCCCCATGGTTGGTTTATTATCCCGAACAAGACTAAGTGCTTTGGTTTCACGTCGAGTCCTCGATCATGGAATGAATCAGAGACCAAATGTAATAGTTATGGCGGGAACTTAGCAGCATTGGTAACATCTCTAGAGTTTGGCTTTGCACAAAATCTGTGTAATAAAACTCTTGGTGGCTGTTGGGTTGGTGGCAGAGTGTTCAACTCTTCGAATGATTCCATCATTCCCAGCTCAGCTTTTCAATCTAATTGCAAAAATGTCTCTTGCCGCATGAATGTTTCGGTTGAAACCTGTACTTTGATATTTGGTGGACAAACAACACCTCTCCTTAAGGCTGAGAAATGCAACAGTTCTCACCCTTTTATATGCATGATAAATCTAGATGATAGATGCCATCGCATGCACTGCCACGAGGAGTATCTAGTCATTCTAGCAGTTGTGAGTGGGTTTATATTTTGCACAACGTTAGCTGTGGTGATTTGGCTTCTTGCCTACAAGAGGAGCAAAAAGCGTAGAAGGTCTCGGAAGCCATACAACCCTGCAGCTTCTGCACTGGTACCGCCTTCATGGAAGGTGTTTACCAAAGAAGAGCTAAGATCGATTACAAAAAACTTCAGTGAGGGAAACCGTCTTCTTGGAGACACAAAAACAGGTGGTACATACAGTGGGCTTTTACCTGATGGTTCAAGAGTTGCAATTAAAAGGTTAAAGAAGTCCAACTTTCAGAGGAAAAAAGAGTTCCATTCTGAAATAGCAAGAGTTGCTAAACTTCGTCACCCAAATTTGGTTGCCCTGAAAGGATGCTGCTATGACCATGGCGACCGCTACATTGTTTATGAATTCATTGTTAATGGGCCCTTAGATAGATGGCTTCACCATGTACCAAGAGGTGGTCGAAGCTTAGATTGGACCATGAGAATGAAAATTGCCACGACTCTTGGCCAAGGGATTGCGTTCCTTCATGACAAGGTTAAGCCACACGTGGTACATCGTGATATCCGTGCCAGTAATGTACTTATTGATGAAGAATTCGGAGCACATCTGATGGGAGTTGGCCTATCAAAACTGGTGGCATATGAAGTGATGCACGAGAGGACAGTGATGGCAGGAGGAACCTATGGATACCTTGCTCCTGAATTTGTCTACAGAAACGAGCTAACAACAAAGAGTGATGTCTATAGTTTCGGGGTGTTGCTGCTTGAAATTGTGACCGGTCGAAGGCCCACACAGGCCGTAGATTCAGTTGGTTGGCAGAGCATTTTCGAATGGGCAACGCCCCTGGTGCAGGCTCACCGTTACCTAGATCTCTTGGATCCTCATATAACGGTCACTTCTACTTCTGAAATTCCGGAGTCTGGAGTAGTTCAGAAGATGGTGGACCTTGTGTACGCTTGCACACAGCATGTCCCGTCCATGCGCCCTAGAATGTCGCACGTTGTTCATCAGTTGCAGCAATTGGCCCCCTCACCTCTCACTATGAAGTAA 1551 45.07 MFNESVSGHSVVSRNENPKGRCPHGWFIIPNKTKCFGFTSSPRSWNESETKCNSYGGNLAALVTSLEFGFAQNLCNKTLGGCWVGGRVFNSSNDSIIPSSAFQSNCKNVSCRMNVSVETCTLIFGGQTTPLLKAEKCNSSHPFICMINLDDRCHRMHCHEEYLVILAVVSGFIFCTTLAVVIWLLAYKRSKKRRRSRKPYNPAASALVPPSWKVFTKEELRSITKNFSEGNRLLGDTKTGGTYSGLLPDGSRVAIKRLKKSNFQRKKEFHSEIARVAKLRHPNLVALKGCCYDHGDRYIVYEFIVNGPLDRWLHHVPRGGRSLDWTMRMKIATTLGQGIAFLHDKVKPHVVHRDIRASNVLIDEEFGAHLMGVGLSKLVAYEVMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVTGRRPTQAVDSVGWQSIFEWATPLVQAHRYLDLLDPHITVTSTSEIPESGVVQKMVDLVYACTQHVPSMRPRMSHVVHQLQQLAPSPLTMK 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 65147254 65151860 + Hsped.07g20850.1 Hepe07g2085 575480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2085 516 SMART tyrkin_6 231 505 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Hepe07g2085 516 Pfam Lectin C-type domain 42 146 IPR001304 -
Hepe07g2085 516 SUPERFAMILY Protein kinase-like (PK-like) 201 505 IPR011009 -
Hepe07g2085 516 PANTHER OS01G0750732 PROTEIN 108 508 IPR050885 -
Hepe07g2085 516 SMART CLECT_2 22 146 IPR001304 -
Hepe07g2085 516 Pfam Protein tyrosine and serine/threonine kinase 233 505 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2085 516 CDD CLECT 34 145 - -
Hepe07g2085 516 ProSiteProfiles Protein kinase domain profile. 228 506 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2085 516 Gene3D - 5 149 IPR016186 -
Hepe07g2085 516 Gene3D Transferase(Phosphotransferase) domain 1 304 512 - -
Hepe07g2085 516 Gene3D Phosphorylase Kinase; domain 1 187 303 - -
Hepe07g2085 516 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 304 516 - -
Hepe07g2085 516 FunFam C-type lectin receptor-like tyrosine-protein kinase 205 303 - -
Hepe07g2085 516 ProSiteProfiles C-type lectin domain profile. 31 146 IPR001304 -
Hepe07g2085 516 ProSitePatterns Tyrosine protein kinases specific active-site signature. 350 362 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2085 516 SUPERFAMILY C-type lectin-like 19 154 IPR016187 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2085 Hepe-Chr7:65147254 Hepe10g1850 Hepe-Chr10:55220573 2.07e-60 dispersed
Hepe07g2085 Hepe-Chr7:65147254 Hepe09g0761 Hepe-Chr9:7360508 4.93e-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72983 PF07714 PK_Tyr_Ser-Thr 2.60E-39 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2085 - - - 0.0