Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g2089 | ATGGGTTGCGTTCTTGGCATACAAGCTGCCGACGCTCGCCGGAGCGCATCCGGACCTCCCAATCGCCGCCGGAGCACCGATCATCACTCTCGTGTCGAAGGAGTTAATGGCGAGAGAGTTAAGCAACAGACGACTTCGCCGTCGGCGGAAAAGCAGGGAGTTCGGCAGGACGTGGATTCCTTGTCCGTAGAGCGCCGGAGGCCTTCGCCGAGCCTTTACCAGAGGAATGAGCAAGGTTGGCCCTCGTGGCTACTGGCGGTTGCCGGCGAGGTGATTCAAGGCTGGATGCCTCGTCGAGCCAATACATTTGAGAAGCTCGCTAAGATAGGGCAAGGGACGTATAGCAATGTGTACAAGGCGAGGGATCTTATTACTGGGAAAATTGTTGCTCTGAAGAAAGTTAGGTTTGATAATTTAGAACCGGAGAGCGTTAGATTTATGGCCAGAGAAATTTTGGTTCTGAAACGCCTCGATCATCCCAATGTGCTTAAGCTCGAAGGCTTAGTTACTTCCAGAATGTCGTGTAGTCTTTACTTAGTTTTTGAGTATATGGAACACGACCTCGCCGGACTTGCTGCCGGTCAAGGAGTCAAGTTCACTGAGCCTCAGGTGAAATGCTATATGAAGCAACTGTTGTCTGGGCTTGAGCACTGTCACAACCGTGGCGTTTTGCATCGTGATATAAAGGGTTCCAATTTGCTAATTGATAACGAAGGAATACTGAAAATAGCTGATTTTGGGTTAGCTACTTTTTTTGATCCCGAGCAGAATCAGCATATGACTAGTCGAGTAGTAACCCTTTGGTACCGTCCACCTGAACTATTGCTTGGAGCTACTCTTTATGGTATTGGGGTTGATCTTTGGAGTGCTGGCTGCATCTTGGCTGAGCTGCTCGCTGGGAGGCCAATTATGCCAGGAAGAACAGAGGTTGAACAACTCCATAAGATATTTAAATTATGTGGTTCTCCATCTGAGGATTACTGGAAGAAGTACAAATTGCCAAATGCAACTCTATTCAAACCCCAACAACCATACAAACGCTGCATTGTGGAAACGCTCAAGGATTTTCCATCTTCTTCTCTACCTCTTATCGAATCTCTCCTTTCAATGGACCCCGATGGGCGAGGTACTGCCACTGCTGCTCTGAATAGCGAATTCTTTACTACCGAGCCTCTTGCTTGTGAACCATCAAGTCTACCTAAATATCCTCCTAGCAAAGAATTGGATGTAAAGTTGAGAGATGAGGAAGCTAGAAGGCAAAGAGCTCTAAGTGGGAAAGCAACAGTCGATGGTGGTGGCAGGAGAGTAAGAGTACGGGATCGAGTTGGTCGGGCTGTCCCGGCTCCTGAAGCTAATGCAGAGATACAAGCAAACTTAGATAGGTGGAGAAATGTGACAAAAGCAAATGCTAAAAGCAAGAGCGAGAAGTTCCCCCCACCTCATCAAGATGGGGCAGTAGGGTACCCGCCACATGAGACATCCCAGAGAGGCCATTTATCATTTGGTGCAGCTGATACTTCATTCAGCTCCTCCATTTTTAATTCAAAATCTGGATCTGTTAAGAGTACAGAAGCTCCTGGAGGACCTTCTCGGAGAAAGAAACCCGATAAAGATAAAGATAAAGATAACCCCTCGGTGTCTTCGTCTCGAAAATTCATCCGTGCACTGAAGCCATCAATCGGGTTATCAATGGATCTGATGTTTAGGGGTAAATAA | 1716 | 47.38 | MGCVLGIQAADARRSASGPPNRRRSTDHHSRVEGVNGERVKQQTTSPSAEKQGVRQDVDSLSVERRRPSPSLYQRNEQGWPSWLLAVAGEVIQGWMPRRANTFEKLAKIGQGTYSNVYKARDLITGKIVALKKVRFDNLEPESVRFMAREILVLKRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHNRGVLHRDIKGSNLLIDNEGILKIADFGLATFFDPEQNQHMTSRVVTLWYRPPELLLGATLYGIGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPSEDYWKKYKLPNATLFKPQQPYKRCIVETLKDFPSSSLPLIESLLSMDPDGRGTATAALNSEFFTTEPLACEPSSLPKYPPSKELDVKLRDEEARRQRALSGKATVDGGGRRVRVRDRVGRAVPAPEANAEIQANLDRWRNVTKANAKSKSEKFPPPHQDGAVGYPPHETSQRGHLSFGAADTSFSSSIFNSKSGSVKSTEAPGGPSRRKKPDKDKDKDNPSVSSSRKFIRALKPSIGLSMDLMFRGK | 571 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 65183008 | 65187011 | + | Hsped.07g20890.1 | Hepe07g2089 | 575484 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g2089 | 571 | CDD | STKc_CDK9_like | 103 | 387 | - | - | |
Hepe07g2089 | 571 | PANTHER | CELL DIVISION PROTEIN KINASE | 102 | 387 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Hepe07g2089 | 571 | SUPERFAMILY | Protein kinase-like (PK-like) | 96 | 392 | IPR011009 | - | |
Hepe07g2089 | 571 | MobiDBLite | consensus disorder prediction | 527 | 547 | - | - | |
Hepe07g2089 | 571 | ProSitePatterns | Protein kinases ATP-binding region signature. | 109 | 132 | IPR017441 | GO:0005524(InterPro) | |
Hepe07g2089 | 571 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 223 | 235 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe07g2089 | 571 | Gene3D | Phosphorylase Kinase; domain 1 | 90 | 185 | - | - | |
Hepe07g2089 | 571 | MobiDBLite | consensus disorder prediction | 512 | 552 | - | - | |
Hepe07g2089 | 571 | ProSiteProfiles | Protein kinase domain profile. | 103 | 387 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g2089 | 571 | Gene3D | Transferase(Phosphotransferase) domain 1 | 186 | 426 | - | - | |
Hepe07g2089 | 571 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
Hepe07g2089 | 571 | MobiDBLite | consensus disorder prediction | 467 | 498 | - | - | |
Hepe07g2089 | 571 | MobiDBLite | consensus disorder prediction | 17 | 36 | - | - | |
Hepe07g2089 | 571 | FunFam | probable serine/threonine-protein kinase At1g54610 | 90 | 185 | - | - | |
Hepe07g2089 | 571 | Pfam | Protein kinase domain | 103 | 387 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g2089 | 571 | MobiDBLite | consensus disorder prediction | 37 | 55 | - | - | |
Hepe07g2089 | 571 | SMART | serkin_6 | 103 | 387 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g2089 | 571 | FunFam | probable serine/threonine-protein kinase At1g54610 | 186 | 427 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g0149 | Hepe-Chr6:5436753 | Hepe07g2089 | Hepe-Chr7:65183008 | 2.20e-145 | dispersed | |
Hepe06g0383 | Hepe-Chr6:14344402 | Hepe07g2089 | Hepe-Chr7:65183008 | 2.88e-191 | dispersed | |
Hepe07g1446 | Hepe-Chr7:47922444 | Hepe07g2089 | Hepe-Chr7:65183008 | 2.25e-112 | dispersed | |
Hepe07g2089 | Hepe-Chr7:65183008 | Hepe08g2381 | Hepe-Chr8:64277137 | 1.00e-228 | dispersed | |
Hepe08g2602 | Hepe-Chr8:67857320 | Hepe07g2089 | Hepe-Chr7:65183008 | 1.33e-36 | dispersed | |
Hepe07g2089 | Hepe-Chr7:65183008 | Hepe09g1602 | Hepe-Chr9:46187710 | 5.14e-230 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72984 | PF00069 | Pkinase | 6.60E-67 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g2089 | K08819 | - | csv:101205716 | 973.77 |