Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2089 ATGGGTTGCGTTCTTGGCATACAAGCTGCCGACGCTCGCCGGAGCGCATCCGGACCTCCCAATCGCCGCCGGAGCACCGATCATCACTCTCGTGTCGAAGGAGTTAATGGCGAGAGAGTTAAGCAACAGACGACTTCGCCGTCGGCGGAAAAGCAGGGAGTTCGGCAGGACGTGGATTCCTTGTCCGTAGAGCGCCGGAGGCCTTCGCCGAGCCTTTACCAGAGGAATGAGCAAGGTTGGCCCTCGTGGCTACTGGCGGTTGCCGGCGAGGTGATTCAAGGCTGGATGCCTCGTCGAGCCAATACATTTGAGAAGCTCGCTAAGATAGGGCAAGGGACGTATAGCAATGTGTACAAGGCGAGGGATCTTATTACTGGGAAAATTGTTGCTCTGAAGAAAGTTAGGTTTGATAATTTAGAACCGGAGAGCGTTAGATTTATGGCCAGAGAAATTTTGGTTCTGAAACGCCTCGATCATCCCAATGTGCTTAAGCTCGAAGGCTTAGTTACTTCCAGAATGTCGTGTAGTCTTTACTTAGTTTTTGAGTATATGGAACACGACCTCGCCGGACTTGCTGCCGGTCAAGGAGTCAAGTTCACTGAGCCTCAGGTGAAATGCTATATGAAGCAACTGTTGTCTGGGCTTGAGCACTGTCACAACCGTGGCGTTTTGCATCGTGATATAAAGGGTTCCAATTTGCTAATTGATAACGAAGGAATACTGAAAATAGCTGATTTTGGGTTAGCTACTTTTTTTGATCCCGAGCAGAATCAGCATATGACTAGTCGAGTAGTAACCCTTTGGTACCGTCCACCTGAACTATTGCTTGGAGCTACTCTTTATGGTATTGGGGTTGATCTTTGGAGTGCTGGCTGCATCTTGGCTGAGCTGCTCGCTGGGAGGCCAATTATGCCAGGAAGAACAGAGGTTGAACAACTCCATAAGATATTTAAATTATGTGGTTCTCCATCTGAGGATTACTGGAAGAAGTACAAATTGCCAAATGCAACTCTATTCAAACCCCAACAACCATACAAACGCTGCATTGTGGAAACGCTCAAGGATTTTCCATCTTCTTCTCTACCTCTTATCGAATCTCTCCTTTCAATGGACCCCGATGGGCGAGGTACTGCCACTGCTGCTCTGAATAGCGAATTCTTTACTACCGAGCCTCTTGCTTGTGAACCATCAAGTCTACCTAAATATCCTCCTAGCAAAGAATTGGATGTAAAGTTGAGAGATGAGGAAGCTAGAAGGCAAAGAGCTCTAAGTGGGAAAGCAACAGTCGATGGTGGTGGCAGGAGAGTAAGAGTACGGGATCGAGTTGGTCGGGCTGTCCCGGCTCCTGAAGCTAATGCAGAGATACAAGCAAACTTAGATAGGTGGAGAAATGTGACAAAAGCAAATGCTAAAAGCAAGAGCGAGAAGTTCCCCCCACCTCATCAAGATGGGGCAGTAGGGTACCCGCCACATGAGACATCCCAGAGAGGCCATTTATCATTTGGTGCAGCTGATACTTCATTCAGCTCCTCCATTTTTAATTCAAAATCTGGATCTGTTAAGAGTACAGAAGCTCCTGGAGGACCTTCTCGGAGAAAGAAACCCGATAAAGATAAAGATAAAGATAACCCCTCGGTGTCTTCGTCTCGAAAATTCATCCGTGCACTGAAGCCATCAATCGGGTTATCAATGGATCTGATGTTTAGGGGTAAATAA 1716 47.38 MGCVLGIQAADARRSASGPPNRRRSTDHHSRVEGVNGERVKQQTTSPSAEKQGVRQDVDSLSVERRRPSPSLYQRNEQGWPSWLLAVAGEVIQGWMPRRANTFEKLAKIGQGTYSNVYKARDLITGKIVALKKVRFDNLEPESVRFMAREILVLKRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHNRGVLHRDIKGSNLLIDNEGILKIADFGLATFFDPEQNQHMTSRVVTLWYRPPELLLGATLYGIGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPSEDYWKKYKLPNATLFKPQQPYKRCIVETLKDFPSSSLPLIESLLSMDPDGRGTATAALNSEFFTTEPLACEPSSLPKYPPSKELDVKLRDEEARRQRALSGKATVDGGGRRVRVRDRVGRAVPAPEANAEIQANLDRWRNVTKANAKSKSEKFPPPHQDGAVGYPPHETSQRGHLSFGAADTSFSSSIFNSKSGSVKSTEAPGGPSRRKKPDKDKDKDNPSVSSSRKFIRALKPSIGLSMDLMFRGK 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 65183008 65187011 + Hsped.07g20890.1 Hepe07g2089 575484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2089 571 CDD STKc_CDK9_like 103 387 - -
Hepe07g2089 571 PANTHER CELL DIVISION PROTEIN KINASE 102 387 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Hepe07g2089 571 SUPERFAMILY Protein kinase-like (PK-like) 96 392 IPR011009 -
Hepe07g2089 571 MobiDBLite consensus disorder prediction 527 547 - -
Hepe07g2089 571 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524(InterPro)
Hepe07g2089 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2089 571 Gene3D Phosphorylase Kinase; domain 1 90 185 - -
Hepe07g2089 571 MobiDBLite consensus disorder prediction 512 552 - -
Hepe07g2089 571 ProSiteProfiles Protein kinase domain profile. 103 387 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2089 571 Gene3D Transferase(Phosphotransferase) domain 1 186 426 - -
Hepe07g2089 571 MobiDBLite consensus disorder prediction 1 73 - -
Hepe07g2089 571 MobiDBLite consensus disorder prediction 467 498 - -
Hepe07g2089 571 MobiDBLite consensus disorder prediction 17 36 - -
Hepe07g2089 571 FunFam probable serine/threonine-protein kinase At1g54610 90 185 - -
Hepe07g2089 571 Pfam Protein kinase domain 103 387 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2089 571 MobiDBLite consensus disorder prediction 37 55 - -
Hepe07g2089 571 SMART serkin_6 103 387 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2089 571 FunFam probable serine/threonine-protein kinase At1g54610 186 427 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0149 Hepe-Chr6:5436753 Hepe07g2089 Hepe-Chr7:65183008 2.20e-145 dispersed
Hepe06g0383 Hepe-Chr6:14344402 Hepe07g2089 Hepe-Chr7:65183008 2.88e-191 dispersed
Hepe07g1446 Hepe-Chr7:47922444 Hepe07g2089 Hepe-Chr7:65183008 2.25e-112 dispersed
Hepe07g2089 Hepe-Chr7:65183008 Hepe08g2381 Hepe-Chr8:64277137 1.00e-228 dispersed
Hepe08g2602 Hepe-Chr8:67857320 Hepe07g2089 Hepe-Chr7:65183008 1.33e-36 dispersed
Hepe07g2089 Hepe-Chr7:65183008 Hepe09g1602 Hepe-Chr9:46187710 5.14e-230 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72984 PF00069 Pkinase 6.60E-67 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2089 K08819 - csv:101205716 973.77