Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2107 ATGGCGACGACGACGACCACCAGTATTGGCGGCGGAGACGGCGGTGGTGGAGGAGAGGATAGAGTTATGGCTACTGCTCAGCAGATACTCAAGAGCCTCAACACTACCCCCAAGGAGGTTCGAGACGATATGCTTTTGATCTTCTCTAGTTTTGACAATCGTCTCTCTAACATCACCAGTTTGGTCAACAGTGGTGATTCGAACACGGAGGGGGATCGATTTCAAGCTGCTGAGAAGGTGATTCTTCGTTGGGATTCTGCTCCTGGTGCTTCCAGGAACTCCCTTAATTGGGACGACTCGCCGGATGACGCGGCTGAGTACTTATCGGCGGTTGATGATATCATTCAGTGGATCGACGACTTGTCAATTCGTTCGGATTCTGCTGAGATCGTCGACCGTGCTGAGAACGCGATCCAGATCGCTATGTCTAGGCTTGAGGATGAGTTTCGTCATATGTTGATTCGGAACACCGTTCCTTTCGATGCTGAGCATCTTTACGGTTCTATTCGGAGGGTTTCACTCTCTTTTGCTTCACACGACTGCGAAAATTCCGATGAATTCGAGTCGTTTGCCGATGTTGACCGTGGTTCGGGAATTTTCCATGAGCGTGGTGTTAGTTTGGGGGATGATTTGCGGGTTGATTTGATCGATCCTGACGCTGTTGATGATTTGAAAGAGATCGCCGACCGGATGATTCGGTCTGGATACGAAAAAGAGTGTGTTAATGTGTATACTGGTGTTCGACGCGATGCTTTAGATGAGTGCTTGGTGGTTCTTGGAGTTGAGAAGCTAAGTATTGAGGATGTCCAGAAAATTGACTGGAAAGTTTTGGATGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGTGTTCGAGTTCTTTTGACGGGCGAGAAGCGACTGTGTGACTATATCTTTAGCGGGTCTGATGATTCTGAGGAAGTTTGTTTCAATGAGACTGCAAAAGGGTGCGTCAGGCAACTACTGAATTTTGCAGAGGCCATTGCTATAGGGGAAAGGTCAGTGGAGAAGCTATTTCGTATTCTAGATATGTATGAAGCTCTGGCATACGTTTTACCGGACTTGCAGGCTATGGTCACTGATGAATTTGTGGTCGAGGAGGCGCGAGGAGTGCTTTCTCGGCTCGGAGAGGCCGCTAAAGGTACATTTGCTGAATTTGAGAATGCTGTTCGGAATGAGACTTCTAAGAAAACAATGTTAAATGCCGAGATTCACCCGCTCACTCGTTATGTCATGAATTACTTAACATTGCTTGTGGTTTATAGTAAGACTCTGGATGCACTTTTAGAAGGCGACGATGAGGATCATCTAGGGGGTGATGGTGCTGACAATTTGGAGTTAGAAACTATGTCTCCTTTAGCCCGTCGACTGTTTTCATTGATATCATCACTGGAGACCAATCTTGAGAGAAAATCCAAACTCTATGGCGATGATTCAATACAAAATATATTTCTCATGAATAATATACAATACATTGTTCAGAAAGTGAAAGATTCTGAGCTTGGAAAGCTCTTGGGTGACCGCTGGGTTCGCAAGCGCCGAGGCCAGGTTCGTGTATATGCAACAAACTATATTAGGGCCTCTTGGGGCAAACTATTATCTTTCTTGAAGGAAGAAGGTACTGGTGGGAGCTCCAATAGTGCCCTGAAACTAGCTACTTTAAAGGAAAAATTCAAAAATTTCAATGCTGGCTTTGAGGAAACCTATAGAATTCAGACAGCTTGGAAGGTTGCAGATGCTCAACTACGAGAAGAGCTCCGAATTTCAGTATCTGCAAGGGTGTTACCTGCATATCGTGCCTTCTTGGGAAGACATGGAAGTCAGTTAGAGAATACAAGACATGCTGGGAGGTATATAAAGTATACCTCGGATGACTTGGAGAACTATTTATTGGATTTGTTTGAAGGATCAGCTTGTGTTATACACCACTTACGAAGAAAAAGTAGTGCATAG 1977 45.12 MATTTTTSIGGGDGGGGGEDRVMATAQQILKSLNTTPKEVRDDMLLIFSSFDNRLSNITSLVNSGDSNTEGDRFQAAEKVILRWDSAPGASRNSLNWDDSPDDAAEYLSAVDDIIQWIDDLSIRSDSAEIVDRAENAIQIAMSRLEDEFRHMLIRNTVPFDAEHLYGSIRRVSLSFASHDCENSDEFESFADVDRGSGIFHERGVSLGDDLRVDLIDPDAVDDLKEIADRMIRSGYEKECVNVYTGVRRDALDECLVVLGVEKLSIEDVQKIDWKVLDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSGSDDSEEVCFNETAKGCVRQLLNFAEAIAIGERSVEKLFRILDMYEALAYVLPDLQAMVTDEFVVEEARGVLSRLGEAAKGTFAEFENAVRNETSKKTMLNAEIHPLTRYVMNYLTLLVVYSKTLDALLEGDDEDHLGGDGADNLELETMSPLARRLFSLISSLETNLERKSKLYGDDSIQNIFLMNNIQYIVQKVKDSELGKLLGDRWVRKRRGQVRVYATNYIRASWGKLLSFLKEEGTGGSSNSALKLATLKEKFKNFNAGFEETYRIQTAWKVADAQLREELRISVSARVLPAYRAFLGRHGSQLENTRHAGRYIKYTSDDLENYLLDLFEGSACVIHHLRRKSSA 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 65393664 65396208 - Hsped.07g21070.1 Hepe07g2107 575502

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2107 658 FunFam Exocyst subunit Exo70 family protein 90 650 - -
Hepe07g2107 658 MobiDBLite consensus disorder prediction 1 20 - -
Hepe07g2107 658 Pfam Exo70 exocyst complex subunit C-terminal 282 640 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Hepe07g2107 658 SUPERFAMILY Cullin repeat-like 76 643 IPR016159 -
Hepe07g2107 658 Gene3D Exocyst complex component Exo70 80 648 - -
Hepe07g2107 658 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 645 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Hepe07g2107 658 Pfam Exocyst complex component Exo70 N-terminal 74 154 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2107 K07195 - - csv:101212753 1153.27
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2107 Hepe-Chr7:65393664 Hepe10g1367 Hepe-Chr10:49930044 1.61e-124 dispersed
Hepe02g1550 Hepe-Chr2:20412162 Hepe07g2107 Hepe-Chr7:65393664 1.59e-146 transposed
Hepe08g1332 Hepe-Chr8:15283444 Hepe07g2107 Hepe-Chr7:65393664 2.20e-27 transposed
Hepe07g2463 Hepe-Chr7:68943329 Hepe07g2107 Hepe-Chr7:65393664 1.53e-119 transposed
Hepe07g2107 Hepe-Chr7:65393664 Hepe09g0051 Hepe-Chr9:422913 8.63e-308 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g116 . Blo16g00265 . . Bpe12g00483 Bpe13g00204 Bma06g00256 . Cmo13g00835 . Cma10g00065 Cma11g00035 Car10g00053 Car11g00032 . Cpe20g00308 Cpe04g01614 . . . . . . . . . . . . . . . . . Cone19ag0206 . . Chy12g01170 Cme12g01592 . . Bda11g01602 Bda14g01366 . Bpe15g00216 Bma03g01256 . Sed08g2438 Cmo10g00061 Cmo11g00037 Cma13g00803 Cma18g00319 Car13g00651 Car18g00228 Cpe09g00962 . Bhi08g01486 Tan05g2961 Cmetu04g0927 Lac10g0582 Hepe07g2107 . . Cla03g00352 Cam03g0370 Cec03g0358 Cco03g0373 Clacu03g0370 Cmu03g0976 Cre03g0668 . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe01g1104 . 41 684 EXO70 exocyst subunit family AT5G03540 76.1 1.4e-283 972.2
Hepe04g1072 . 1 637 EXO70 exocyst subunit family AT5G03540 69.8 1.3e-257 885.9
Hepe04g1072 . 1 637 EXO70 exocyst subunit family AT5G52340 78.2 2.8e-289 991.1
Hepe01g1104 . 43 684 EXO70 exocyst subunit family AT5G52340 73.5 6.4e-270 926.8
Hepe04g1072 . 145 630 EXO70 exocyst subunit family AT5G52350 62.2 3.7e-171 598.6
Hepe01g1104 . 178 684 EXO70 exocyst subunit family AT5G52350 58.0 3.4e-164 575.5
Hepe10g1367 . 1 630 EXO70 exocyst subunit family AT5G58430 67.1 1.0e-248 856.3
Hepe10g1367 . 1 623 EXO70 exocyst subunit family AT1G07000 52.7 9.3e-178 620.5
Hepe05g1167 . 58 661 EXO70 exocyst subunit family AT5G13150 52.1 8.3e-172 600.9
Hepe02g2406 . 115 722 EXO70 exocyst subunit family AT5G13990 52.2 8.5e-183 637.5
Hepe05g0540 . 50 353 EXO70 exocyst subunit family AT5G13990 54.7 2.3e-95 347.1
Hepe02g1550 . 9 606 EXO70 exocyst subunit family AT1G72470 64.4 1.5e-213 739.6
Hepe02g1550 . 9 604 EXO70 exocyst subunit family AT1G54090 61.2 6.0e-204 707.6
Hepe02g1550 . 9 605 EXO70 exocyst subunit family AT3G14090 64.2 1.1e-218 756.5
Hepe07g2107 . 19 656 EXO70 exocyst subunit family AT5G50380 63.4 7.0e-230 793.9
Hepe09g0051 . 14 651 EXO70 exocyst subunit family AT5G50380 62.0 1.8e-225 779.2
Hepe10g0323 . 16 682 EXO70 exocyst subunit family AT4G31540 73.4 1.8e-294 1008.4
Hepe01g0852 . 54 612 EXO70 exocyst subunit family AT2G39380 50.2 6.7e-150 528.1
Hepe05g0203 . 36 638 EXO70 exocyst subunit family AT3G09520 54.2 1.4e-176 616.7
Hepe05g0204 . 1 638 EXO70 exocyst subunit family AT3G09520 51.5 1.6e-172 603.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001393 4 1 3 4 4 2 4 2 2 2 2 2 4 2 2 3 2 2 4 2 2 2 2 2 2 2 2 4 2 1 74