Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2135 ATGGCGAATCCGAATCTCCCCCATTGTGTTGATCGCCGGAGCGGTTTCTGTCCTCGAACTAAGATTTTCCACAGCATCCGACCACCGCTCTCACTCCCGCCGGTATCTCAGCCTCTCACCGTCGACGGACACGCCCTTTCTCTTCTCCATTCAGCCCCTCCTCCGGCGAACACCACTGCTCTCATCGACTCCGACTCCGGCGTCAATGTCTCCTACGGCATTTTCCTCCGTCAAATTCGAAACCTCACCTCTAATCTCAGAGCTCTTTACTCCTTCTCCAATGGTCAAGTGGCTTTTATTCTTTCACCGACTTCTCTGCAAGTCCCTGTGCTGTACTTCGCTCTGTTATCTCTCGGCGTTATAGTCTCTCCGGCTAATCCAATCGGTTCCGAATCGGAGATTTCTCACCAGGTGAAACTCTGTAAACCGGTCATTGCCTTCGCGACGTCCTCAACGGCGTCCAAGCTCCCGAGGTTTCAATTCGGCACTGTCCTGATAGATTCTCCTGAGTTTCTATCTATGATGAGTGAATGTAGTCAATCGGACGGAGTTGTTGACATCAAAATCAATCAAAACGACTCGGCGGCGATTCTGTACTCGTCAGGGACCACCGGGCGAGTGAAAGGCGTCTTACTGTCTCACCGGAACCTCATATCAGCGATCTCTAGCGTTCATAAGTCGGATACGATGGCCAATGAAGGAGAGATGGAGGAGCCACATTCTGTGTCTCTGTGTTTGTTACCTTTGTTCCATGTTTTCGGATTCTATATGATGATTCGATCGATTTCACTGGGCGATACTTTGGTTCTGATGCGAAAGTTCGACTTCGAGGGGATGTTAAGAGCAGTGGAGAAGTATATGGTCACATATATTCCGGTTTCTCCGCCGCTGGTGGTGGCGTTGGCCAAGTCGGAGCTGGTGGCGAAGTATGACCTAAGTTCTCTTCTAATTTTGGGATGCGGCGGCGCTCCTCTTGGGAAAGAAGTTATCGATAGATTCCATGTTAAGTTCCCCAATGTAGAAATTGTACAGGGATATGGCTTGACAGAGAGTTCAGCAGCGGCATCAAGAACAGTGGGGCCTGAAGAATGCAGTAATACAAGTTCAGTAGGTCGCTTATCTGAAAGTCTGGAAGCCAAAATAGTGGATCCTGAATCTGGAGAGGTCTTATCTCCTGGTCAAAAAGGAGAGCTTTGGCTGCGAGGTCCAGGAATCATGAAAGGTTATGTTGGAGATGAGAAAGCAACTGCTGAAACCTTGCATCCCGAGGGATGGCTAAAGACTGGTGATCTTTGCTATTTTGATTCTGATGGATTCCTCTACATTGTCGATAGATTAAAAGAATTGATCAAGTACAAGGCCTATCAGGTCCCACCTGCTGAATTGGAACATTTGCTTCAATCCAACCCTGAGATCATCGACGCCGCTGTGATACCCTATCCTGACGAAGCAGCAGGAGAGATTCCTATGGCTTATGTTGTTAGAAAGCCTGGAAGCAATTTCACTGAGGCTCAAGTCATTGATTTCATTGCAAAACAGGTTGCACCATACAAGAAAATCCGGCGAGTGTCTTTTGTCGACACAATCCCGAAATCGCCTGCAGGGAAGATTCTTAGGAGGGAGCTTGTCAAACATGCTCTCTCTCACGGATTTAGTAAGTTATAA 1665 48.11 MANPNLPHCVDRRSGFCPRTKIFHSIRPPLSLPPVSQPLTVDGHALSLLHSAPPPANTTALIDSDSGVNVSYGIFLRQIRNLTSNLRALYSFSNGQVAFILSPTSLQVPVLYFALLSLGVIVSPANPIGSESEISHQVKLCKPVIAFATSSTASKLPRFQFGTVLIDSPEFLSMMSECSQSDGVVDIKINQNDSAAILYSSGTTGRVKGVLLSHRNLISAISSVHKSDTMANEGEMEEPHSVSLCLLPLFHVFGFYMMIRSISLGDTLVLMRKFDFEGMLRAVEKYMVTYIPVSPPLVVALAKSELVAKYDLSSLLILGCGGAPLGKEVIDRFHVKFPNVEIVQGYGLTESSAAASRTVGPEECSNTSSVGRLSESLEAKIVDPESGEVLSPGQKGELWLRGPGIMKGYVGDEKATAETLHPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLQSNPEIIDAAVIPYPDEAAGEIPMAYVVRKPGSNFTEAQVIDFIAKQVAPYKKIRRVSFVDTIPKSPAGKILRRELVKHALSHGFSKL 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 65667156 65670862 + Hsped.07g21350.1 Hepe07g2135 575530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2135 554 Gene3D - 448 548 IPR045851 -
Hepe07g2135 554 Pfam AMP-binding enzyme 55 409 IPR000873 -
Hepe07g2135 554 SUPERFAMILY Acetyl-CoA synthetase-like 55 548 - -
Hepe07g2135 554 CDD 4CL 33 542 - -
Hepe07g2135 554 Gene3D - 32 447 IPR042099 -
Hepe07g2135 554 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 16 542 - GO:0016405(PANTHER)
Hepe07g2135 554 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Hepe07g2135 554 Pfam AMP-binding enzyme C-terminal domain 461 536 IPR025110 -
Hepe07g2135 554 FunFam 4-coumarate--CoA ligase 2 448 549 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2324 Hepe-Chr1:87826885 Hepe07g2135 Hepe-Chr7:65667156 2.32e-162 dispersed
Hepe06g1557 Hepe-Chr6:66280576 Hepe07g2135 Hepe-Chr7:65667156 9.09e-46 dispersed
Hepe06g1813 Hepe-Chr6:69210885 Hepe07g2135 Hepe-Chr7:65667156 7.78e-122 dispersed
Hepe07g2135 Hepe-Chr7:65667156 Hepe09g0491 Hepe-Chr9:4565972 2.88e-103 dispersed
Hepe07g2135 Hepe-Chr7:65667156 Hepe07g2136 Hepe-Chr7:65672121 1.03e-310 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2135 K01904 - csv:101211791 891.723