Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2136 ATGGCGGATCGTAATCCAAACTCAACCGCCGCCCATTTCGTTGATCGCCGAAGTGGTTTCTGTCCTCAAACCAAGATTTTCCACAGCCTCCGACCACCGCTCTCACTTCCCCCAATATCTCAGCCTCTCTCCATCACCGAACACGTCCTTTCTCTCCTTCAATCATCCCCTCCCCCTGCAAACGCCACCGTCCTCGTCGATTCTAACTCCGGCGTCCATCTCTCCTACGCCATTTTCCTCCGTCAGATTCGAACTCTCGCCTCGAATCTTCAAGCCCTAACCTCCCTCTCCAATGGTCAAGTCGCGTTTATTCTCGCACCGACTTCTCTGGAAGTACCTGTGTTGTATTTCGCTTTGTTATCTCTCGGTGTTGTTCTCTCTCCGGCTAATCCAGCTAGTTCCGAATCGGAGATTTCTCATCAGATTCAACTCAGTAAACCGGTCATCGCTTTCGCTACATCCTCAACGGCATCCAAGCTCCCGAGGCTTCGATTCGGCACCGTCCTGATCGATTCTCCTGAGTTTCTCTCTATGATGAACGAATCCAATCGATCTGATGGTTTTAGCGACGGAAAAATCGATCAATCCGAATCGGCGGCGATTCTGTACTCATCAGGTACTACAGGGCGGGTGAAAGGCGTGTTACTGAGTCATCGGAACCTCATCGTGGTGAACTCTGGGACTCATGCTCCTCCATCGATGGAATCACATCCGGTTGCTCTGTGTTTGTTGCCTCTATTCCATGTTTTCGGGTTCGTGATGTTGATTCGAGCGATTTCGCGAGGCGAAACGTTGGTTCTGATGGAGAGATTCGATTTCGAGGGGATGTTGAGAGCGGTGGAGAAGTTTAGGGTTATATACATCCCGGTTTCTCCGCCGCTGGTGGTGGCGATGGCGAAGTCGGAGCTGGTGGCGAAGTACGATCTGAGTTCGCTTCAAATTTTGGGATGCGGCGGGGCTCCTCTTGGGAAAGAAGTGATCGAGAAATTCCATGAGAAGTTGCCCAAGGTTGAAATTATGCAGGGATATGGCTTGACAGAGAGTACAGCAGGGGCAGCAAGAACTGTGGGGCCCGAGGAAAACAGTAACACAAGTTCAGTAGGTCGCCTATCTGAAAATATGGAAGCCAAGATAGTGGATCCTGCATCTGGAGAAGCCTTACCTCATGCCCACAAAGGAGAGCTTTGGCTACGAGGTCCAGCGATCATGAAAGGTTATGTTGGAGATGAGAAGGCAACTGCTGAAACCTTGCATACAGAAGGATGGCTAAAGACGGGTGATCTTTGCTATTTTGATTCTGATGGATTCCTCTACATTGTTGATAGATTAAAAGAATTGATCAAGTACAAGGCCTATCAGGTCCCACCTGCTGAATTGGAACACTTGCTTCAATCCAACCCTGACATCATTGACGCTGCTGTGATACCCTATCCTAATGAAGAAGCAGGAGAGATTCCTATGGCTTATGTTGTTAGAAAGCCTGAAAGCAATATCACTGAGGCTCAAGTCATTGATTTCATTGCAAAACAGGTTGCACCTTACAAGAAAATTCGACGAGTATCTTTTATCAACGCAATCCCAAAATCGCCAGCAGGGAAGATTCTCAGGAGGGAGCTTGTCAAACATGCTCTCACTCATGATTCTACTTGTCGCCTTACATTTTCGGGTTGGAAAATGTCCCTCCGACCACCACTCTCACTTCCACCGCCCTTTCTCTCCTCCAAACGCCGCCGTTTCGTCGACTCCAACTCCGGCGTTCATCTCTCTTGCGCCATTTTCCTCCGTCAGATTCGAACCCTCGCCTCTAATCTCAAAGCCCTAACCTCCCTCTCCAATGTTCTCTCTCCGGCTAATCCAACTGGTTCCGAATCGGAGATTTCTCATCAGATTCAACTCAGTAAACCGGTCATTGCCTTCGGTACATCCTCAGCGGCGTCCAAGCTCCCGAGGCTTCAATTCGGCACCGTCCTGATCGATTCGCCTGAATTTCTCTCTATGATGACCAAATTCAATCGAACAATCCGAATCGGCGGCGATTCTGTACTCGTCAGGTACTACAGCGCGAGTGAAAGGCGTGTTACTGAGTCATCGGAAACTCATCAATCGGTGGTCAACGAAAGAATTATCTTGCATCTCTGA 2139 49.18 MADRNPNSTAAHFVDRRSGFCPQTKIFHSLRPPLSLPPISQPLSITEHVLSLLQSSPPPANATVLVDSNSGVHLSYAIFLRQIRTLASNLQALTSLSNGQVAFILAPTSLEVPVLYFALLSLGVVLSPANPASSESEISHQIQLSKPVIAFATSSTASKLPRLRFGTVLIDSPEFLSMMNESNRSDGFSDGKIDQSESAAILYSSGTTGRVKGVLLSHRNLIVVNSGTHAPPSMESHPVALCLLPLFHVFGFVMLIRAISRGETLVLMERFDFEGMLRAVEKFRVIYIPVSPPLVVAMAKSELVAKYDLSSLQILGCGGAPLGKEVIEKFHEKLPKVEIMQGYGLTESTAGAARTVGPEENSNTSSVGRLSENMEAKIVDPASGEALPHAHKGELWLRGPAIMKGYVGDEKATAETLHTEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLQSNPDIIDAAVIPYPNEEAGEIPMAYVVRKPESNITEAQVIDFIAKQVAPYKKIRRVSFINAIPKSPAGKILRRELVKHALTHDSTCRLTFSGWKMSLRPPLSLPPPFLSSKRRRFVDSNSGVHLSCAIFLRQIRTLASNLKALTSLSNVLSPANPTGSESEISHQIQLSKPVIAFGTSSAASKLPRLQFGTVLIDSPEFLSMMTKFNRTIRIGGDSVLVRYYSASERRVTESSETHQSVVNERIILHL 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 65672121 65678984 + Hsped.07g21360.1 Hepe07g2136 575531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2136 712 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
Hepe07g2136 712 Gene3D - 30 444 IPR042099 -
Hepe07g2136 712 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Hepe07g2136 712 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 539 - GO:0016405(PANTHER)
Hepe07g2136 712 Gene3D - 445 546 IPR045851 -
Hepe07g2136 712 Pfam AMP-binding enzyme 59 406 IPR000873 -
Hepe07g2136 712 CDD 4CL 42 539 - -
Hepe07g2136 712 SUPERFAMILY Acetyl-CoA synthetase-like 58 545 - -
Hepe07g2136 712 FunFam 4-coumarate--CoA ligase 2 445 546 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2136 Hepe-Chr7:65672121 Hepe08g1122 Hepe-Chr8:11201392 6.72e-97 dispersed
Hepe07g2135 Hepe-Chr7:65667156 Hepe07g2136 Hepe-Chr7:65672121 1.03e-310 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2136 K01904 - csv:101213796 884.404