Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2179 ATGGATCCAACATCCTACAAAAATAATCTCCACCAACTTTGGCAAGAAATGATTCAATCTCCACATGAAGAAGGAGCCACCAATATCTCATTTTCTCTTATCATCCTCTTCCTCTTGTTCTTCTTCATACTTTCACTCAAACTCCTCTCCTCCAAAAACACCAACAAAAAGTTAGCACCTTCACCACCACAACTCCCAATAATTGGCAACCTCCACCAACTAGGCAGCCTCCCACATCGCTCAGTTGCATCTCTTTCCCAAAAATATGGCCCTCTCATTCTCCTCAAATTAGGGCAAACCCCAACTCTTGTAGTCTCATCACCAAAATTAGCTCAAAAAGTAATGAAATCCCATGACATCATATTCTCAAACAGAGCTCAAAACACAGCTGCAAAATCCTTGCTCTACAATTGCCATGATGTTGCCTTTGCTTCCTATGGGGAGAAATGGAGACAAGCAAGAAAAGTTAGTGTTTTGCATCTCTTGAGCACCAAAAGAGTTGAGTCTTTCCAATATGTGAGAGATGAAGAAGTTGGTTTGCTTGTCGAAACGATTCGTAAGGCTTGTGTTTGTAGCGAGTTTGTGAATCTTAGCCAATTGTTGATATCAACTTCGAACAATATCGTGTCGAGATGTGTTTTGGGAGAGAAGTTTGAGGATGGAAATGGGAAGAATAGATTTGGAGATGTGACGAGAAAGGTTTTAGTGCTTTTGACGACGTTTTGTGTTGGTGATGCTTTTCCTTGGCTTTGGTGGGTTGATGTGTTGAGAGGGTTTCATGGAGAACTCAAAAGCACTTTTCGAATGCTGGATGTGCTTTTTGATAAAGTGATTGAAGAACATAGGGAGAAGATGAAGAGTGGGAATCGACCTGATGAGAAGACGGACTTTGTTGATATTATGCTTCAATTGCAACAAGATGATTCTCTAGATTATCGTTTCACTATGGACGATTTCAAAGCGATTATACTGGTTTTGTTTCTCTCTCTTACATGA 996 40.36 MDPTSYKNNLHQLWQEMIQSPHEEGATNISFSLIILFLLFFFILSLKLLSSKNTNKKLAPSPPQLPIIGNLHQLGSLPHRSVASLSQKYGPLILLKLGQTPTLVVSSPKLAQKVMKSHDIIFSNRAQNTAAKSLLYNCHDVAFASYGEKWRQARKVSVLHLLSTKRVESFQYVRDEEVGLLVETIRKACVCSEFVNLSQLLISTSNNIVSRCVLGEKFEDGNGKNRFGDVTRKVLVLLTTFCVGDAFPWLWWVDVLRGFHGELKSTFRMLDVLFDKVIEEHREKMKSGNRPDEKTDFVDIMLQLQQDDSLDYRFTMDDFKAIILVLFLSLT 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66096518 66097513 + Hsped.07g21790.1 Hepe07g2179 575574

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2179 331 SUPERFAMILY Cytochrome P450 57 328 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe07g2179 331 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 38 323 - -
Hepe07g2179 331 Gene3D Cytochrome P450 49 330 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe07g2179 331 Pfam Cytochrome P450 60 327 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe07g2179 331 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe07g2179 331 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe07g2179 331 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2179 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2179 Hepe-Chr7:66096518 Hepe07g2188 Hepe-Chr7:66244238 1.35e-206 dispersed
Hepe07g2179 Hepe-Chr7:66096518 Hepe07g2181 Hepe-Chr7:66106635 2.95e-205 proximal
Hepe10g1570 Hepe-Chr10:52425296 Hepe07g2179 Hepe-Chr7:66096518 8.90e-53 wgd
Hepe07g2179 Hepe-Chr7:66096518 Hepe09g0245 Hepe-Chr9:2114975 2.44e-66 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g861 . . Bda06g00623 Bda15g00532 . . . Bma12g01061 . Cmo18g00175 . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0183 . Lsi02g00436 Csa01g00909 Chy12g01217 Cme12g01643 Blo13g00154 Blo15g00245 . . . . . . . . . . . . . . . Bhi08g01683 . . . Hepe07g2179 . . Cla03g00302 . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000106 14 8 5 4 4 8 0 8 5 13 4 7 6 8 6 16 5 16 1 6 10 8 6 12 5 13 10 7 10 3 228