Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2195 ATGTCTCAGGATTCGCCACTGGATCAAGACATCGATGAATCTGATCCCGAGTTCGTGGAGATTGATCCTACGGGTCGATATGGACGGTATAAGGAAATTTTAGGTAAAGGGGCATTCAAAAAGGTATATCGGGCTTTTGATCAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGGTTAAGGTAACAGATTTATTGCGGAACTCTGAAGATTTGGAGCGACTCTATTCAGAAGTTCATTTGCTCAAGACATTGAAGCACAAGAACATAATCAAATTTTTCAATTCGTGGGTTGATACGAAAAATGAAAATATCAACTTCATTACTGAGATATTCACTTCAGGGACACTACGGCAATATAGAAAGAAACACAAGCATGTTGATGTGAGAGCATTGAAAAAGTGGTCCAGGCAGATATTAGAAGGCCTTCTGTATCTTCATAGTCATGATCCTCCAGTTATACATAGAGATTTAAAGTGTGACAATATCTTTGTCAATGGCAACCAAGGTGAGGTGAAAATAGGTGACCTAGGACTTGCTGCCATTCTTCAACAAGCTCGTTCAGCTCACAGTGTCATTGGGACACCGGAGTTTATGGCCCCGGAGCTGTATGAAGAGGAATATAATGAGCTTGTCGATATTTATGCCTTTGGCATGTGTTTGCTTGAGCTTGTAACCTTTGAATATCCATATATTGAATGTGCAAATGCCGCTCAAATATATAAGAAGGTCACATCAGGGATTAAACCAGCTTCATTGGTAAGAGTCACTGATCCAGGAGTTAGAGCATTTATAGAAAAATGTATTGCAAATGCCTCGGATCGCTTGCCTGCAAAAGATCTTTTAAGAGATCCATTTCTCCAAGCAGATGATGATCATAATAGTATATCTCATCATTTACATTCCAAGATACATCATCCAGAAGAAAAAAGTGAGCAGATTGATATTGATAGAAATGTAGATGATACTTCTACTGAGACTAGCAGAGATTTCAGTATGCATGGTGAGAGAAAAGATGTAAACAAGATATTTCTCAAACTACGAATTGCAGATTCCATGGGTAATTTCCGCAATATCCATTTTCCATTTGATATTGAAGCCGATACATCAATTTCTGTTGCTAGTGAAATGGTTGAGGAGCTGGATCTTTCAGATCAAGATGTTTCCACGATTTCTGAAATGATTGAAACAGAAATTCGATCTTACATTCCAGATTGGACATCAGTTGAGTATACGGTAGATAATGTAGGAGCAGATGTTGCAATTTCCGAGGGCTCTGCATCTGAAACAAGGAATGCTGCCTCTCCTTTGTCTATTGAATCTGGTAACCTTGCATTAGAGGTAATGCCTTCAGGTCGCAAGTATTGGTCCGACTCTCCAAGGGGAATTGGTGGGTGCTCTCCTATTAAGCCAGGTCCTTCAAACTTGTCTTTTATCTCAGATCAGAATGTTGAATCCCCTAGCTGTCACATGCATGGGGATGATCTAGATCATGCTGCTATAATTAAAGGATTGGAAAGTGAGCTTTTGTCCGAGGATGGTGCTAATGATGGGCAGGATGAGGGTATCTCAACTACAAATCTTCATGCTATCTCTGGGGCACATCCTTCAAAAGAGAACTTTGGAGTTTCAGAACATGATGAATCAATTGACGTCGAGATAATGGCCGAAAAACTTGAAAATTTGTTGACACACCAGCAAAAAGAATTAGATAAACTGAAGAGGAAGCATAAATTAGCTATCTCAGAACTTCTTACTGAACTTACACCTGAGTCCTATCAGAAGGTTTTAGAGATGTGCAATCATTCTGATTTTGAGTTGGTTCTTTGA 1827 39.41 MSQDSPLDQDIDESDPEFVEIDPTGRYGRYKEILGKGAFKKVYRAFDQLEGIEVAWNQVKVTDLLRNSEDLERLYSEVHLLKTLKHKNIIKFFNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDVRALKKWSRQILEGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQARSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYIECANAAQIYKKVTSGIKPASLVRVTDPGVRAFIEKCIANASDRLPAKDLLRDPFLQADDDHNSISHHLHSKIHHPEEKSEQIDIDRNVDDTSTETSRDFSMHGERKDVNKIFLKLRIADSMGNFRNIHFPFDIEADTSISVASEMVEELDLSDQDVSTISEMIETEIRSYIPDWTSVEYTVDNVGADVAISEGSASETRNAASPLSIESGNLALEVMPSGRKYWSDSPRGIGGCSPIKPGPSNLSFISDQNVESPSCHMHGDDLDHAAIIKGLESELLSEDGANDGQDEGISTTNLHAISGAHPSKENFGVSEHDESIDVEIMAEKLENLLTHQQKELDKLKRKHKLAISELLTELTPESYQKVLEMCNHSDFELVL 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66352175 66356503 + Hsped.07g21950.1 Hepe07g2195 575590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2195 608 CDD STKc_WNK 26 286 - -
Hepe07g2195 608 Gene3D Transferase(Phosphotransferase) domain 1 111 294 - -
Hepe07g2195 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2195 608 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2195 608 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 580 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Hepe07g2195 608 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Hepe07g2195 608 Coils Coil 555 582 - -
Hepe07g2195 608 FunFam probable serine/threonine-protein kinase WNK9 111 291 - -
Hepe07g2195 608 FunFam Probable serine/threonine-protein kinase WNK1 12 109 - -
Hepe07g2195 608 Gene3D - 340 418 - -
Hepe07g2195 608 Pfam Protein kinase domain 31 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2195 608 MobiDBLite consensus disorder prediction 1 22 - -
Hepe07g2195 608 Gene3D Phosphorylase Kinase; domain 1 11 109 - -
Hepe07g2195 608 SMART serkin_6 28 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2195 608 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 344 398 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0687 Hepe-Chr4:60420509 Hepe07g2195 Hepe-Chr7:66352175 3.55e-142 dispersed
Hepe06g1447 Hepe-Chr6:65035686 Hepe07g2195 Hepe-Chr7:66352175 1.03e-158 dispersed
Hepe07g2195 Hepe-Chr7:66352175 Hepe09g1530 Hepe-Chr9:40128449 2.21e-163 dispersed
Hepe07g2195 Hepe-Chr7:66352175 Hepe03g0197 Hepe-Chr3:2532869 1.82e-164 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72987 PF00069 Pkinase 1.60E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2195 K08867 - csv:101206177 1036.94