Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g2205 | ATGGCATCATCAACAACAACAAGCAGCCATTATTACAGCCCTTGTGCAGCTTGCAAATTCCTAAGAAGAAAATGCTTACCCGGATGCGTTTTTGCACCCTATTTCCCACCAGAGGAACCTCAAAAATTCTCGAATGTCCACAAGGTTTTCGGAGCCAGCAACGTTTCCAAGCTCCTTAACGAAGTTCTTCCTCATCAACGACAAGACACCGTCGCTTCGCTCGCCTACGAAGCCGAGGCTCGAATCAGAGATCCTGTTTATGGCTGTGTTGCCGCCATTTCCTACCTCCAAAAACAGGTTCAAAGCCTCCAAAAGGAACTTGAAGCTGCTAAAGCTCGCCTTTTTCTCTACTCTTGCACTGATTTCTCAACTCCTCCTCCACTCATTTGGAATCATAATAATAATTATGATCATCATCATGTTCTTTCTGCTAATTCTTCTATGTATTTTAATGGAGGAATTTAA | 465 | 43.23 | MASSTTTSSHYYSPCAACKFLRRKCLPGCVFAPYFPPEEPQKFSNVHKVFGASNVSKLLNEVLPHQRQDTVASLAYEAEARIRDPVYGCVAAISYLQKQVQSLQKELEAAKARLFLYSCTDFSTPPPLIWNHNNNYDHHHVLSANSSMYFNGGI | 154 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 66445971 | 66447130 | + | Hsped.07g22050.1 | Hepe07g2205 | 575600 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g2205 | 154 | Coils | Coil | 93 | 113 | - | - | |
Hepe07g2205 | 154 | ProSiteProfiles | LOB domain profile. | 13 | 114 | IPR004883 | - | |
Hepe07g2205 | 154 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 13 | 119 | - | - | |
Hepe07g2205 | 154 | Pfam | Lateral organ boundaries (LOB) domain | 14 | 111 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g1935 | Hepe-Chr6:70569932 | Hepe07g2205 | Hepe-Chr7:66445971 | 9.63e-32 | dispersed | |
Hepe07g2205 | Hepe-Chr7:66445971 | Hepe08g2048 | Hepe-Chr8:57459279 | 6.68e-51 | dispersed | |
Hepe02g3080 | Hepe-Chr2:79972513 | Hepe07g2205 | Hepe-Chr7:66445971 | 1.32e-55 | wgd | |
Hepe02g1786 | Hepe-Chr2:26266403 | Hepe07g2205 | Hepe-Chr7:66445971 | 2.85e-62 | wgd | |
Hepe07g2205 | Hepe-Chr7:66445971 | Hepe09g0225 | Hepe-Chr9:1949857 | 5.30e-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56030 | PF03195 | LOB | 1.50E-41 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g2205 | - | - | - | 0.0 |