Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2205 ATGGCATCATCAACAACAACAAGCAGCCATTATTACAGCCCTTGTGCAGCTTGCAAATTCCTAAGAAGAAAATGCTTACCCGGATGCGTTTTTGCACCCTATTTCCCACCAGAGGAACCTCAAAAATTCTCGAATGTCCACAAGGTTTTCGGAGCCAGCAACGTTTCCAAGCTCCTTAACGAAGTTCTTCCTCATCAACGACAAGACACCGTCGCTTCGCTCGCCTACGAAGCCGAGGCTCGAATCAGAGATCCTGTTTATGGCTGTGTTGCCGCCATTTCCTACCTCCAAAAACAGGTTCAAAGCCTCCAAAAGGAACTTGAAGCTGCTAAAGCTCGCCTTTTTCTCTACTCTTGCACTGATTTCTCAACTCCTCCTCCACTCATTTGGAATCATAATAATAATTATGATCATCATCATGTTCTTTCTGCTAATTCTTCTATGTATTTTAATGGAGGAATTTAA 465 43.23 MASSTTTSSHYYSPCAACKFLRRKCLPGCVFAPYFPPEEPQKFSNVHKVFGASNVSKLLNEVLPHQRQDTVASLAYEAEARIRDPVYGCVAAISYLQKQVQSLQKELEAAKARLFLYSCTDFSTPPPLIWNHNNNYDHHHVLSANSSMYFNGGI 154
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66445971 66447130 + Hsped.07g22050.1 Hepe07g2205 575600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2205 154 Coils Coil 93 113 - -
Hepe07g2205 154 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Hepe07g2205 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 119 - -
Hepe07g2205 154 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1935 Hepe-Chr6:70569932 Hepe07g2205 Hepe-Chr7:66445971 9.63e-32 dispersed
Hepe07g2205 Hepe-Chr7:66445971 Hepe08g2048 Hepe-Chr8:57459279 6.68e-51 dispersed
Hepe02g3080 Hepe-Chr2:79972513 Hepe07g2205 Hepe-Chr7:66445971 1.32e-55 wgd
Hepe02g1786 Hepe-Chr2:26266403 Hepe07g2205 Hepe-Chr7:66445971 2.85e-62 wgd
Hepe07g2205 Hepe-Chr7:66445971 Hepe09g0225 Hepe-Chr9:1949857 5.30e-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56030 PF03195 LOB 1.50E-41 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2205 - - - 0.0