Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2223 ATGCAGAGCTCTGCAGTTACTTTCTCCTCTTCTCTTCCTCTTCTCAAGCCTCGGAGGCCTTCCAGTTCTTCCTTCAACTCTGGATGTAACTCAATTCGCTTGTCTTCTTCCTCTTCCTCAAATTCCAGAGATCTCGGTGACCTGAACAATGTTGGAATCCCTTCCGCTTGGCCTCAGCGATCTTGGACTCTCTCGTCGTCTCCTTTTTCCTCCTCGAAACTCCGGCCATGGACTGGTGTGCCCTCGCTTGCTTCGGATTCCGATGCGAGTCATTTCAAGGTTCAGGCCACTGCGGTGCCTGATAGCTCAGAGGAGGCCGCCAGTGATGGCGGTAATCTAAAGAAAACGTTGGAGCTCGGGTTGTTGTTTGCCTTCTGGTACCTTTTCAACATCTACTTTAACATCTACAACAAGCAGGTTCTCAAGGTGTTTCCGTTCCCTGTGACTGTCACTGCAGTTCAATTTACTGTAGGCACTGTACTTGTTCTGCTTATGTGGGGACTTAATCTCTACAAAAAGCCAAAGATCAGTGGTGCTCAGCTTGCTGCTATTCTGCCACTGGCATTTGTTCACACGTTGGGAAATCTTTTTACAAATATGAGTCTTGGGAAAGTGGCGGTATCGTTCACTCACACAATCAAAGCTATGGAGCCATTTTTTTCAGTTATCCTGTCAGCAATGTTTCTTGGAGAGACTCCTACTCCTTGGGTAGTTTTATCCCTTCTGCCAATTGTTGGTGGTGTTGCATTGGCATCTGCTACTGAGGCCTCCTTCAACTGGGCTGGATTTTCGAGTGCAATGGCATCCAATTTGACTAATCAATCTCGTAATGTCCTTAGCAAAAAGGTCATGGTGAAAAAAGACGAATCAATTGACAACATCACCCTCTTTTCAATTATAACCGTCATGTCCTTTTTCTTATTAACCCCTGTGGCTATCTTCATGGAAGGTGTCAAGGTTACACCTGCATACCTTCAATCAGCTGGATTGAACGTGAACCAAGTATACATTAGGTCTCTTCTTGCTGCCCTTTGTTTCCATGCATACCAACAGGTTTCTTACATGATATTGGCAAGAGTATCGCCTGTTACCCACTCAGTAGGCAATTGTGTAAAGCGTGTTGTTGTCATCGTGAGCTCTGTTATCTTCTTCCAAACACCGGTTTCTCCAATCAACACTATCGGCACTGGAATAGCTCTTTCTGGGGTTTTCCTGTATTCGAGGGTTAAGCGCATCAAAGCTAAGCCGAAGACAGCCTAA 1260 45.71 MQSSAVTFSSSLPLLKPRRPSSSSFNSGCNSIRLSSSSSSNSRDLGDLNNVGIPSAWPQRSWTLSSSPFSSSKLRPWTGVPSLASDSDASHFKVQATAVPDSSEEAASDGGNLKKTLELGLLFAFWYLFNIYFNIYNKQVLKVFPFPVTVTAVQFTVGTVLVLLMWGLNLYKKPKISGAQLAAILPLAFVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGETPTPWVVLSLLPIVGGVALASATEASFNWAGFSSAMASNLTNQSRNVLSKKVMVKKDESIDNITLFSIITVMSFFLLTPVAIFMEGVKVTPAYLQSAGLNVNQVYIRSLLAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINTIGTGIALSGVFLYSRVKRIKAKPKTA 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66598556 66602268 + Hsped.07g22230.1 Hepe07g2223 575618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2223 419 Pfam Triose-phosphate Transporter family 118 407 IPR004853 -
Hepe07g2223 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 162 252 - -
Hepe07g2223 419 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 117 417 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe07g2223 419 PANTHER SOLUTE CARRIER FAMILY 35 109 408 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Hepe07g2223 419 MobiDBLite consensus disorder prediction 1 46 - -
Hepe07g2223 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 331 410 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1847 Hepe-Chr5:68785154 Hepe07g2223 Hepe-Chr7:66598556 9.78e-76 dispersed
Hepe07g2223 Hepe-Chr7:66598556 Hepe10g1791 Hepe-Chr10:54663444 7.84e-54 dispersed
Hepe02g3091 Hepe-Chr2:80059535 Hepe07g2223 Hepe-Chr7:66598556 1.30e-141 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2223 K15283 - csv:101203848 705.671